RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W UGA4P32837 571 aa4.53□□□□□ -1.68
SSF1YHR066W POL5P39985 1022 aaKnown RBP4.53□□□□□ -1.68
SSF1YHR066W NEO1P40527 1151 aa4.53□□□□□ -1.68
SSF1YHR066W FET4P40988 552 aa4.53□□□□□ -1.68
SSF1YHR066W LEM3P42838 414 aa4.53□□□□□ -1.68
SSF1YHR066W YAF9P53930 226 aa4.53□□□□□ -1.68
SSF1YHR066W DAL4Q04895 635 aa4.53□□□□□ -1.69
SSF1YHR066W PMT7Q06644 662 aa4.53□□□□□ -1.69
SSF1YHR066W HTS1P07263 546 aaKnown RBP4.52□□□□□ -1.69
SSF1YHR066W PRP40P33203 583 aaKnown RBP4.52□□□□□ -1.69
SSF1YHR066W FAA3P39002 694 aa4.52□□□□□ -1.69
SSF1YHR066W RVS167P39743 482 aaKnown RBP4.52□□□□□ -1.69
SSF1YHR066W SPO71Q03868 1245 aa4.52□□□□□ -1.69
SSF1YHR066W BRE4Q07660 1125 aa4.52□□□□□ -1.69
SSF1YHR066W ERS1P17261 260 aa4.51□□□□□ -1.69
SSF1YHR066W MCM5P29496 775 aaKnown RBP4.51□□□□□ -1.69
SSF1YHR066W YJR107WP47145 328 aa4.51□□□□□ -1.69
SSF1YHR066W OXR1Q08952 273 aa4.51□□□□□ -1.69
SSF1YHR066W TY1A-NL1Q12391 440 aaKnown RBP4.51□□□□□ -1.69
SSF1YHR066W HXK1P04806 485 aaKnown RBP4.5□□□□□ -1.69
SSF1YHR066W MCM2P29469 868 aa4.5□□□□□ -1.69
SSF1YHR066W MGE1P38523 228 aa4.5□□□□□ -1.69
SSF1YHR066W FYV10P40492 516 aa4.5□□□□□ -1.69
SSF1YHR066W ULP1Q02724 621 aa4.5□□□□□ -1.69
SSF1YHR066W ELG1Q12050 791 aa4.5□□□□□ -1.69
SSF1YHR066W SEC8P32855 1065 aa4.49□□□□□ -1.69
SSF1YHR066W DSE4P53753 1117 aa4.49□□□□□ -1.69
SSF1YHR066W YIG1Q08956 461 aa4.49□□□□□ -1.69
SSF1YHR066W TY1A-LR4P0C2I8 440 aaKnown RBP4.48□□□□□ -1.69
SSF1YHR066W TY1A-DR6P0CX70 440 aa4.48□□□□□ -1.69
SSF1YHR066W TY1A-ER1P0CX71 440 aa4.48□□□□□ -1.69
SSF1YHR066W TY1A-LR2P0CX72 440 aa4.48□□□□□ -1.69
SSF1YHR066W TY1A-PLP0CX73 440 aa4.48□□□□□ -1.69
SSF1YHR066W TY1A-JR1P0CX74 440 aa4.48□□□□□ -1.69
SSF1YHR066W TY1A-LR3P0CX75 440 aa4.48□□□□□ -1.69
SSF1YHR066W TY1A-ML2P0CX76 440 aa4.48□□□□□ -1.69
SSF1YHR066W ASF1P32447 279 aa4.48□□□□□ -1.69
SSF1YHR066W MAE1P36013 669 aaKnown RBP4.48□□□□□ -1.69
SSF1YHR066W EXO5P38289 585 aa4.48□□□□□ -1.69
SSF1YHR066W UBP5P39944 805 aa4.48□□□□□ -1.69
SSF1YHR066W YGR122WP53272 402 aa4.48□□□□□ -1.69
SSF1YHR066W YGR130CP53278 816 aa4.48□□□□□ -1.69
SSF1YHR066W YPL109CQ02981 657 aa4.48□□□□□ -1.69
SSF1YHR066W SPR28Q04921 423 aa4.48□□□□□ -1.69
SSF1YHR066W MAG2Q06436 670 aaKnown RBP4.48□□□□□ -1.69
SSF1YHR066W TY1A-GR1Q12085 440 aa4.48□□□□□ -1.69
SSF1YHR066W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.48□□□□□ -1.69
SSF1YHR066W TY1A-OLQ92392 440 aaKnown RBP4.48□□□□□ -1.69
SSF1YHR066W KAR2P16474 682 aaKnown RBP4.47□□□□□ -1.69
SSF1YHR066W RPS26AP39938 119 aaKnown RBP4.47□□□□□ -1.69
SSF1YHR066W RPS26BP39939 119 aaKnown RBP4.47□□□□□ -1.69
SSF1YHR066W NOG1Q02892 647 aaKnown RBP4.47□□□□□ -1.69
SSF1YHR066W CYC8P14922 966 aa4.46□□□□□ -1.7
SSF1YHR066W RNQ1P25367 405 aa4.46□□□□□ -1.7
SSF1YHR066W SAF1P38352 637 aa4.46□□□□□ -1.7
SSF1YHR066W PIC2P40035 300 aa4.46□□□□□ -1.7
SSF1YHR066W GCV1P48015 400 aa4.46□□□□□ -1.7
SSF1YHR066W KIP3P53086 805 aaKnown RBP4.46□□□□□ -1.7
SSF1YHR066W UTP22P53254 1237 aaPredicted RBP4.46□□□□□ -1.7
SSF1YHR066W OYE2Q03558 400 aaKnown RBP4.46□□□□□ -1.7
SSF1YHR066W ADI1Q03677 179 aa4.46□□□□□ -1.7
SSF1YHR066W RAD2P07276 1031 aa4.45□□□□□ -1.7
SSF1YHR066W MSH3P25336 1018 aa4.45□□□□□ -1.7
SSF1YHR066W RSC6P25632 483 aa4.45□□□□□ -1.7
SSF1YHR066W NCE103P53615 221 aa4.45□□□□□ -1.7
SSF1YHR066W FAR11P53917 953 aa4.45□□□□□ -1.7
SSF1YHR066W PEX13P80667 386 aa4.45□□□□□ -1.7
SSF1YHR066W MEC3Q02574 474 aa4.45□□□□□ -1.7
SSF1YHR066W HEM13P11353 328 aaKnown RBP4.44□□□□□ -1.7
SSF1YHR066W CHS2P14180 963 aa4.44□□□□□ -1.7
SSF1YHR066W NEM1P38757 446 aa4.44□□□□□ -1.7
SSF1YHR066W PEX28P38848 579 aa4.44□□□□□ -1.7
SSF1YHR066W SLS1P42900 643 aa4.44□□□□□ -1.7
SSF1YHR066W RSM26P47141 266 aa4.44□□□□□ -1.7
SSF1YHR066W YMR074CQ04773 145 aa4.44□□□□□ -1.7
SSF1YHR066W REC8Q12188 680 aa4.44□□□□□ -1.7
SSF1YHR066W PRE9P23638 258 aaKnown RBP4.43□□□□□ -1.7
SSF1YHR066W SQT1P35184 431 aa4.43□□□□□ -1.7
SSF1YHR066W YKL077WP36081 392 aa4.43□□□□□ -1.7
SSF1YHR066W SHU2P38957 223 aa4.43□□□□□ -1.7
SSF1YHR066W ALG6Q12001 544 aaKnown RBP4.43□□□□□ -1.7
SSF1YHR066W NAM7P30771 971 aaKnown RBP4.42□□□□□ -1.7
SSF1YHR066W RDH54P38086 958 aa4.42□□□□□ -1.7
SSF1YHR066W REI1P38344 393 aaPredicted RBP4.42□□□□□ -1.7
SSF1YHR066W MRPS18P42847 217 aa4.42□□□□□ -1.7
SSF1YHR066W YGL140CP53120 1219 aa4.42□□□□□ -1.7
SSF1YHR066W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SSF1YHR066W YOR223WQ12015 292 aa4.42□□□□□ -1.7
SSF1YHR066W MCD1Q12158 566 aa4.42□□□□□ -1.7
SSF1YHR066W CYC7P00045 113 aa4.41□□□□□ -1.7
SSF1YHR066W ARL1P38116 183 aaKnown RBP4.41□□□□□ -1.7
SSF1YHR066W DOT1Q04089 582 aaKnown RBP4.41□□□□□ -1.7
SSF1YHR066W UTP5Q04177 643 aaKnown RBP4.41□□□□□ -1.7
SSF1YHR066W SEC23P15303 768 aaKnown RBP4.4□□□□□ -1.7
SSF1YHR066W AKR1P39010 764 aa4.4□□□□□ -1.7
SSF1YHR066W SPO74P45819 413 aa4.4□□□□□ -1.7
SSF1YHR066W ESF1Q06344 628 aaKnown RBP4.4□□□□□ -1.7
SSF1YHR066W YLL054CQ12244 843 aa4.4□□□□□ -1.7
SSF1YHR066W VMA4P22203 233 aaKnown RBP4.4□□□□□ -1.71
SSF1YHR066W PEP7P32609 515 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms