RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C SQT1P35184 431 aa6.39□□□□□ -1.39
CUP1-2YHR055C CCT8P47079 568 aaKnown RBP6.39□□□□□ -1.39
CUP1-2YHR055C RSM26P47141 266 aa6.39□□□□□ -1.39
CUP1-2YHR055C ARI1P53111 347 aaKnown RBP6.39□□□□□ -1.39
CUP1-2YHR055C ATE1P16639 503 aa6.38□□□□□ -1.39
CUP1-2YHR055C ERS1P17261 260 aa6.38□□□□□ -1.39
CUP1-2YHR055C ULP1Q02724 621 aa6.38□□□□□ -1.39
CUP1-2YHR055C MCA1Q08601 432 aa6.38□□□□□ -1.39
CUP1-2YHR055C KIP3P53086 805 aaKnown RBP6.37□□□□□ -1.39
CUP1-2YHR055C YJR107WP47145 328 aa6.36□□□□□ -1.39
CUP1-2YHR055C YGR122WP53272 402 aa6.36□□□□□ -1.39
CUP1-2YHR055C PEX13P80667 386 aa6.36□□□□□ -1.39
CUP1-2YHR055C MEC3Q02574 474 aa6.36□□□□□ -1.39
CUP1-2YHR055C YPL034WQ03083 165 aa6.36□□□□□ -1.39
CUP1-2YHR055C RRP15Q06511 250 aaPredicted RBP6.36□□□□□ -1.39
CUP1-2YHR055C YOR223WQ12015 292 aa6.36□□□□□ -1.39
CUP1-2YHR055C COQ2P32378 372 aa6.35□□□□□ -1.39
CUP1-2YHR055C UGA4P32837 571 aa6.35□□□□□ -1.39
CUP1-2YHR055C REI1P38344 393 aaPredicted RBP6.35□□□□□ -1.39
CUP1-2YHR055C FAA3P39002 694 aa6.35□□□□□ -1.39
CUP1-2YHR055C NOG1Q02892 647 aaKnown RBP6.35□□□□□ -1.39
CUP1-2YHR055C ADI1Q03677 179 aa6.35□□□□□ -1.39
CUP1-2YHR055C TOS4Q06266 489 aa6.35□□□□□ -1.39
CUP1-2YHR055C REC8Q12188 680 aa6.35□□□□□ -1.39
CUP1-2YHR055C HXK1P04806 485 aaKnown RBP6.34□□□□□ -1.39
CUP1-2YHR055C ARL1P38116 183 aaKnown RBP6.34□□□□□ -1.39
CUP1-2YHR055C MRPS18P42847 217 aa6.34□□□□□ -1.39
CUP1-2YHR055C MTR4P47047 1073 aaKnown RBP6.34□□□□□ -1.39
CUP1-2YHR055C NCE103P53615 221 aa6.34□□□□□ -1.39
CUP1-2YHR055C YPL109CQ02981 657 aa6.34□□□□□ -1.39
CUP1-2YHR055C MSH3P25336 1018 aa6.33□□□□□ -1.4
CUP1-2YHR055C ATG14P38270 344 aa6.33□□□□□ -1.4
CUP1-2YHR055C EXO5P38289 585 aa6.33□□□□□ -1.4
CUP1-2YHR055C RPS26AP39938 119 aaKnown RBP6.33□□□□□ -1.4
CUP1-2YHR055C RPS26BP39939 119 aaKnown RBP6.33□□□□□ -1.4
CUP1-2YHR055C MCD1Q12158 566 aa6.33□□□□□ -1.4
CUP1-2YHR055C TY1A-LR4P0C2I8 440 aaKnown RBP6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-DR6P0CX70 440 aa6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-ER1P0CX71 440 aa6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-LR2P0CX72 440 aa6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-PLP0CX73 440 aa6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-JR1P0CX74 440 aa6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-LR3P0CX75 440 aa6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-ML2P0CX76 440 aa6.32□□□□□ -1.4
CUP1-2YHR055C PRE9P23638 258 aaKnown RBP6.32□□□□□ -1.4
CUP1-2YHR055C MCM2P29469 868 aa6.32□□□□□ -1.4
CUP1-2YHR055C SEC8P32855 1065 aa6.32□□□□□ -1.4
CUP1-2YHR055C PEX28P38848 579 aa6.32□□□□□ -1.4
CUP1-2YHR055C AKR1P39010 764 aa6.32□□□□□ -1.4
CUP1-2YHR055C DOT1Q04089 582 aaKnown RBP6.32□□□□□ -1.4
CUP1-2YHR055C AVO1Q08236 1176 aa6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-GR1Q12085 440 aa6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.32□□□□□ -1.4
CUP1-2YHR055C TY1A-OLQ92392 440 aaKnown RBP6.32□□□□□ -1.4
CUP1-2YHR055C OYE2Q03558 400 aaKnown RBP6.31□□□□□ -1.4
CUP1-2YHR055C ALG6Q12001 544 aaKnown RBP6.31□□□□□ -1.4
CUP1-2YHR055C RAD2P07276 1031 aa6.3□□□□□ -1.4
CUP1-2YHR055C SBP1P10080 294 aaKnown RBP6.3□□□□□ -1.4
CUP1-2YHR055C CYC8P14922 966 aa6.3□□□□□ -1.4
CUP1-2YHR055C VMA4P22203 233 aaKnown RBP6.3□□□□□ -1.4
CUP1-2YHR055C PEP7P32609 515 aa6.3□□□□□ -1.4
CUP1-2YHR055C GIC2Q06648 383 aa6.3□□□□□ -1.4
CUP1-2YHR055C NAM7P30771 971 aaKnown RBP6.29□□□□□ -1.4
CUP1-2YHR055C PGM1P33401 570 aaKnown RBP6.29□□□□□ -1.4
CUP1-2YHR055C GPT2P36148 743 aa6.29□□□□□ -1.4
CUP1-2YHR055C SAF1P38352 637 aa6.29□□□□□ -1.4
CUP1-2YHR055C FYV10P40492 516 aa6.29□□□□□ -1.4
CUP1-2YHR055C SLS1P42900 643 aa6.29□□□□□ -1.4
CUP1-2YHR055C SPR28Q04921 423 aa6.29□□□□□ -1.4
CUP1-2YHR055C ESF1Q06344 628 aaKnown RBP6.29□□□□□ -1.4
CUP1-2YHR055C CHS2P14180 963 aa6.28□□□□□ -1.4
CUP1-2YHR055C KAE1P36132 386 aa6.28□□□□□ -1.4
CUP1-2YHR055C NEM1P38757 446 aa6.28□□□□□ -1.4
CUP1-2YHR055C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
CUP1-2YHR055C YGL140CP53120 1219 aa6.27□□□□□ -1.41
CUP1-2YHR055C RMD1Q03441 430 aa6.27□□□□□ -1.41
CUP1-2YHR055C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
CUP1-2YHR055C LAP2Q10740 671 aa6.27□□□□□ -1.41
CUP1-2YHR055C HSE1P38753 452 aa6.26□□□□□ -1.41
CUP1-2YHR055C PIC2P40035 300 aa6.26□□□□□ -1.41
CUP1-2YHR055C YGR045CP53229 120 aa6.26□□□□□ -1.41
CUP1-2YHR055C ELA1P53861 379 aaPredicted RBP6.26□□□□□ -1.41
CUP1-2YHR055C UTP5Q04177 643 aaKnown RBP6.26□□□□□ -1.41
CUP1-2YHR055C TAF13P11747 167 aa6.25□□□□□ -1.41
CUP1-2YHR055C SEC23P15303 768 aaKnown RBP6.25□□□□□ -1.41
CUP1-2YHR055C YAR028WP39548 234 aa6.25□□□□□ -1.41
CUP1-2YHR055C XKS1P42826 600 aa6.25□□□□□ -1.41
CUP1-2YHR055C SPO74P45819 413 aa6.25□□□□□ -1.41
CUP1-2YHR055C YLR122CQ12312 125 aa6.25□□□□□ -1.41
CUP1-2YHR055C NNK1P36003 928 aa6.24□□□□□ -1.41
CUP1-2YHR055C MSH4P40965 878 aaPredicted RBP6.24□□□□□ -1.41
CUP1-2YHR055C MMM1P41800 426 aa6.24□□□□□ -1.41
CUP1-2YHR055C SNU71P53207 620 aaKnown RBP6.24□□□□□ -1.41
CUP1-2YHR055C RPS4AP0CX35 261 aaKnown RBP6.23□□□□□ -1.41
CUP1-2YHR055C RPS4BP0CX36 261 aaKnown RBP6.23□□□□□ -1.41
CUP1-2YHR055C SMY2P32909 740 aaKnown RBP6.23□□□□□ -1.41
CUP1-2YHR055C ADD66P36040 267 aa6.23□□□□□ -1.41
CUP1-2YHR055C YNR063WP53749 607 aa6.23□□□□□ -1.41
CUP1-2YHR055C NSI1Q12457 570 aa6.23□□□□□ -1.41
CUP1-2YHR055C MSB1P21339 1137 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms