RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C ADI1Q03677 179 aa7.74□□□□□ -1.17
SHO1YER118C FAP7Q12055 197 aaPredicted RBP7.74□□□□□ -1.17
SHO1YER118C RTP1Q12751 981 aa7.74□□□□□ -1.17
SHO1YER118C FOB1O13329 566 aa7.73□□□□□ -1.17
SHO1YER118C INH1P01097 85 aa7.73□□□□□ -1.17
SHO1YER118C SBP1P10080 294 aaKnown RBP7.73□□□□□ -1.17
SHO1YER118C UGA4P32837 571 aa7.73□□□□□ -1.17
SHO1YER118C EAP1P36041 632 aaKnown RBP7.73□□□□□ -1.17
SHO1YER118C ISM1P48526 1002 aa7.73□□□□□ -1.17
SHO1YER118C BET3P36149 193 aa7.72□□□□□ -1.17
SHO1YER118C HSE1P38753 452 aa7.72□□□□□ -1.17
SHO1YER118C RAD55P38953 406 aa7.72□□□□□ -1.17
SHO1YER118C MAL11P53048 616 aa7.72□□□□□ -1.17
SHO1YER118C KXD1P53158 218 aa7.72□□□□□ -1.17
SHO1YER118C MET14Q02196 202 aa7.72□□□□□ -1.17
SHO1YER118C ULP1Q02724 621 aa7.72□□□□□ -1.17
SHO1YER118C TY1A-DR4O74302 440 aa7.71□□□□□ -1.18
SHO1YER118C FLP1P03870 423 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-HP0C2I4 478 aaKnown RBP7.71□□□□□ -1.18
SHO1YER118C TY1A-AP0CX57 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-PR1P0CX58 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-ORP0CX59 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-PR2P0CX60 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-DR5P0CX65 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-ER2P0CX66 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-GR3P0CX67 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-LR1P0CX68 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-MR2P0CX69 440 aa7.71□□□□□ -1.18
SHO1YER118C DAL5P15365 543 aa7.71□□□□□ -1.18
SHO1YER118C SBA1P28707 216 aaKnown RBP7.71□□□□□ -1.18
SHO1YER118C TFC3P34111 1160 aa7.71□□□□□ -1.18
SHO1YER118C PTH2P34222 208 aa7.71□□□□□ -1.18
SHO1YER118C VBA5P36172 582 aa7.71□□□□□ -1.18
SHO1YER118C ULI1P43604 169 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-JR2P47099 440 aa7.71□□□□□ -1.18
SHO1YER118C UTP8P53276 713 aaKnown RBP7.71□□□□□ -1.18
SHO1YER118C CWC22P53333 577 aaKnown RBP7.71□□□□□ -1.18
SHO1YER118C KRE33P53914 1056 aaKnown RBP7.71□□□□□ -1.18
SHO1YER118C TY1A-DR1Q03856 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-ML1Q04706 440 aaKnown RBP7.71□□□□□ -1.18
SHO1YER118C TRE2Q08693 809 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-BRQ12217 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-NL2Q12470 440 aa7.71□□□□□ -1.18
SHO1YER118C TY1A-GR2Q12485 440 aa7.71□□□□□ -1.18
SHO1YER118C TY4B-PA0A0B7P3V8 1104 aa7.7□□□□□ -1.18
SHO1YER118C VMA3P25515 160 aa7.7□□□□□ -1.18
SHO1YER118C PLC1P32383 869 aa7.7□□□□□ -1.18
SHO1YER118C UTR2P32623 467 aa7.7□□□□□ -1.18
SHO1YER118C PBY1P38254 753 aa7.7□□□□□ -1.18
SHO1YER118C EXO84P38261 753 aa7.7□□□□□ -1.18
SHO1YER118C GDH3P39708 457 aa7.7□□□□□ -1.18
SHO1YER118C PAC1P39946 494 aaKnown RBP7.7□□□□□ -1.18
SHO1YER118C MID1P41821 548 aa7.7□□□□□ -1.18
SHO1YER118C MRL1Q06815 381 aa7.7□□□□□ -1.18
SHO1YER118C TY4A-HQ6Q5P6 413 aa7.7□□□□□ -1.18
SHO1YER118C SEC2P17065 759 aa7.69□□□□□ -1.18
SHO1YER118C GFD2P25370 566 aaKnown RBP7.69□□□□□ -1.18
SHO1YER118C GCD11P32481 527 aaKnown RBP7.69□□□□□ -1.18
SHO1YER118C SWI3P32591 825 aa7.69□□□□□ -1.18
SHO1YER118C HXT10P43581 546 aa7.69□□□□□ -1.18
SHO1YER118C GNP1P48813 663 aa7.69□□□□□ -1.18
SHO1YER118C SDA1P53313 767 aaKnown RBP7.69□□□□□ -1.18
SHO1YER118C GIC2Q06648 383 aa7.69□□□□□ -1.18
SHO1YER118C YLR001CQ07895 862 aa7.69□□□□□ -1.18
SHO1YER118C RLP24Q07915 199 aaKnown RBP7.69□□□□□ -1.18
SHO1YER118C PSR2Q07949 397 aa7.69□□□□□ -1.18
SHO1YER118C PSK2Q08217 1101 aa7.69□□□□□ -1.18
SHO1YER118C IOC2Q12072 812 aa7.69□□□□□ -1.18
SHO1YER118C GAL1P04385 528 aa7.68□□□□□ -1.18
SHO1YER118C SIS1P25294 352 aaKnown RBP7.68□□□□□ -1.18
SHO1YER118C ABD1P32783 436 aaPredicted RBP7.68□□□□□ -1.18
SHO1YER118C SCD5P34758 872 aa7.68□□□□□ -1.18
SHO1YER118C SEA4P38164 1038 aa7.68□□□□□ -1.18
SHO1YER118C NTA1P40354 457 aa7.68□□□□□ -1.18
SHO1YER118C FAF1P40546 346 aaPredicted RBP7.68□□□□□ -1.18
SHO1YER118C SRB7P47822 140 aa7.68□□□□□ -1.18
SHO1YER118C NMA111P53920 997 aa7.68□□□□□ -1.18
SHO1YER118C YDL124WQ07551 312 aaKnown RBP7.68□□□□□ -1.18
SHO1YER118C RRP6Q12149 733 aaKnown RBP7.68□□□□□ -1.18
SHO1YER118C PTP2P29461 750 aa7.67□□□□□ -1.18
SHO1YER118C TFC4P33339 1025 aa7.67□□□□□ -1.18
SHO1YER118C IRS4P36115 615 aaKnown RBP7.67□□□□□ -1.18
SHO1YER118C RGD2P43556 714 aa7.67□□□□□ -1.18
SHO1YER118C TIF6Q12522 245 aaKnown RBP7.67□□□□□ -1.18
SHO1YER118C TRP2P00899 507 aaKnown RBP7.66□□□□□ -1.18
SHO1YER118C MCM1P11746 286 aa7.66□□□□□ -1.18
SHO1YER118C TAF13P11747 167 aa7.66□□□□□ -1.18
SHO1YER118C MEF1P25039 761 aa7.66□□□□□ -1.18
SHO1YER118C PUF4P25339 888 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18 RIP-Chip
SHO1YER118C APL2P36000 726 aaPredicted RBP7.66□□□□□ -1.18
SHO1YER118C TYS1P36421 394 aaKnown RBP7.66□□□□□ -1.18
SHO1YER118C BAP2P38084 609 aa7.66□□□□□ -1.18
SHO1YER118C LDH1P38139 375 aa7.66□□□□□ -1.18
SHO1YER118C PSY2P40164 858 aa7.66□□□□□ -1.18
SHO1YER118C ALA1P40825 983 aaKnown RBP7.66□□□□□ -1.18
SHO1YER118C XKS1P42826 600 aa7.66□□□□□ -1.18
SHO1YER118C ALR2P43553 858 aa7.66□□□□□ -1.18
SHO1YER118C TAF1P46677 1066 aa7.66□□□□□ -1.18
SHO1YER118C HFD1Q04458 532 aa7.66□□□□□ -1.18
SHO1YER118C TPD3P31383 635 aa7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 201.2 ms