RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 NLRP13Q86W25 1043 aa20.88■□□□□ 0.93
SRRT-219ENST00000641476 BCL11BQ9C0K0 894 aaPredicted RBP20.88■□□□□ 0.93
SRRT-219ENST00000641476 SBNO2Q9Y2G9 1366 aa20.87■□□□□ 0.93
SRRT-219ENST00000641476 PTF1AQ7RTS3 328 aa20.87■□□□□ 0.93
SRRT-219ENST00000641476 ZNF784Q8NCA9 323 aaPredicted RBP20.87■□□□□ 0.93
SRRT-219ENST00000641476 TONSLQ96HA7 1378 aa20.86■□□□□ 0.93
SRRT-219ENST00000641476 DDB1Q16531 1140 aa20.86■□□□□ 0.93
SRRT-219ENST00000641476 PEAK1Q9H792 1746 aa20.85■□□□□ 0.93
SRRT-219ENST00000641476 ATF5Q9Y2D1 282 aaPredicted RBP20.84■□□□□ 0.93
SRRT-219ENST00000641476 LRRC37A3O60309 1634 aa20.84■□□□□ 0.93
SRRT-219ENST00000641476 CASZ1Q86V15 1759 aa20.84■□□□□ 0.93
SRRT-219ENST00000641476 PTGER2P43116 358 aa20.83■□□□□ 0.93
SRRT-219ENST00000641476 TOM1L2Q6ZVM7 507 aa20.83■□□□□ 0.93
SRRT-219ENST00000641476 WNK3Q9BYP7 1800 aa20.83■□□□□ 0.92
SRRT-219ENST00000641476 RGPD3A6NKT7 1758 aaPredicted RBP20.82■□□□□ 0.92
SRRT-219ENST00000641476 COL18A1P39060 1754 aa20.82■□□□□ 0.92
SRRT-219ENST00000641476 RGPD4Q7Z3J3 1758 aa20.82■□□□□ 0.92
SRRT-219ENST00000641476 CPSF1Q10570 1443 aaKnown RBP20.82■□□□□ 0.92
SRRT-219ENST00000641476 PROM2Q8N271 834 aa20.82■□□□□ 0.92
SRRT-219ENST00000641476 MYOM1P52179 1685 aa20.82■□□□□ 0.92
SRRT-219ENST00000641476 UTRNP46939 3433 aa20.81■□□□□ 0.92
SRRT-219ENST00000641476 USP54Q70EL1 1684 aa20.81■□□□□ 0.92
SRRT-219ENST00000641476 NLRP6P59044 892 aa20.81■□□□□ 0.92
SRRT-219ENST00000641476 CARD11Q9BXL7 1154 aa20.81■□□□□ 0.92
SRRT-219ENST00000641476 NFAT5O94916 1531 aa20.8■□□□□ 0.92
SRRT-219ENST00000641476 SENP3-EIF4A1A0A087X0R7 540 aa20.8■□□□□ 0.92
SRRT-219ENST00000641476 MARCH10Q8NA82 808 aaPredicted RBP20.8■□□□□ 0.92
SRRT-219ENST00000641476 FHDC1Q9C0D6 1143 aaPredicted RBP20.8■□□□□ 0.92
SRRT-219ENST00000641476 STK32BQ9NY57 414 aa20.8■□□□□ 0.92
SRRT-219ENST00000641476 AATKQ6ZMQ8 1374 aa20.8■□□□□ 0.92
SRRT-219ENST00000641476 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
SRRT-219ENST00000641476 SYT17Q9BSW7 474 aa20.78■□□□□ 0.92
SRRT-219ENST00000641476 CD163L1Q9NR16 1453 aa20.77■□□□□ 0.92
SRRT-219ENST00000641476 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
SRRT-219ENST00000641476 TXNRD1Q16881 649 aa20.77■□□□□ 0.92
SRRT-219ENST00000641476 TTC21AQ8NDW8 1320 aa20.77■□□□□ 0.91
SRRT-219ENST00000641476 ZNF692Q9BU19 519 aaPredicted RBP20.76■□□□□ 0.91
SRRT-219ENST00000641476 ABCC6O95255 1503 aa20.76■□□□□ 0.91
SRRT-219ENST00000641476 RGPD5Q99666 1765 aa20.76■□□□□ 0.91
SRRT-219ENST00000641476 TRIM26Q12899 539 aaPredicted RBP20.75■□□□□ 0.91
SRRT-219ENST00000641476 SLC15A2Q16348 729 aa20.75■□□□□ 0.91
SRRT-219ENST00000641476 WDR17Q8IZU2 1322 aa20.75■□□□□ 0.91
SRRT-219ENST00000641476 SBF2Q86WG5 1849 aa20.74■□□□□ 0.91
SRRT-219ENST00000641476 CDCA7Q9BWT1 371 aaPredicted RBP20.74■□□□□ 0.91
SRRT-219ENST00000641476 MTFR1LQ9H019 292 aa20.74■□□□□ 0.91
SRRT-219ENST00000641476 AXIN2Q9Y2T1 843 aa20.74■□□□□ 0.91
SRRT-219ENST00000641476 BCL9O00512 1426 aa20.73■□□□□ 0.91
SRRT-219ENST00000641476 CSB-PGBD3P0DP91 1061 aa20.72■□□□□ 0.91
SRRT-219ENST00000641476 C1QTNF8P60827 252 aa20.72■□□□□ 0.91
SRRT-219ENST00000641476 LTN1O94822 1766 aa20.71■□□□□ 0.91
SRRT-219ENST00000641476 SOX12O15370 315 aa20.7■□□□□ 0.9
SRRT-219ENST00000641476 KCNH5Q8NCM2 988 aa20.7■□□□□ 0.9
SRRT-219ENST00000641476 ARHGEF25Q86VW2 580 aa20.69■□□□□ 0.9
SRRT-219ENST00000641476 SGIP1Q9BQI5 828 aa20.69■□□□□ 0.9
SRRT-219ENST00000641476 USP31Q70CQ4 1352 aa20.69■□□□□ 0.9
SRRT-219ENST00000641476 EDC4Q6P2E9 1401 aaKnown RBP20.69■□□□□ 0.9
SRRT-219ENST00000641476 A0A1W2PP64 1363 aa20.68■□□□□ 0.9
SRRT-219ENST00000641476 EXOC5O00471 708 aa20.67■□□□□ 0.9
SRRT-219ENST00000641476 ARXQ96QS3 562 aa20.67■□□□□ 0.9
SRRT-219ENST00000641476 CARD10Q9BWT7 1032 aa20.67■□□□□ 0.9
SRRT-219ENST00000641476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.66■□□□□ 0.9
SRRT-219ENST00000641476 TMC1Q8TDI8 760 aa20.66■□□□□ 0.9
SRRT-219ENST00000641476 NME9Q86XW9 330 aa20.65■□□□□ 0.9
SRRT-219ENST00000641476 ACSBG1Q96GR2 724 aa20.65■□□□□ 0.9
SRRT-219ENST00000641476 HDGFL2Q7Z4V5 671 aaPredicted RBP20.64■□□□□ 0.89
SRRT-219ENST00000641476 TESK2Q96S53 571 aa20.64■□□□□ 0.89
SRRT-219ENST00000641476 TNS2Q63HR2 1409 aa20.63■□□□□ 0.89
SRRT-219ENST00000641476 GPR162Q16538 588 aa20.63■□□□□ 0.89
SRRT-219ENST00000641476 SLC12A5Q9H2X9 1139 aa20.63■□□□□ 0.89
SRRT-219ENST00000641476 CCDC7Q96M83 1385 aa20.62■□□□□ 0.89
SRRT-219ENST00000641476 MAP3K5Q99683 1374 aa20.61■□□□□ 0.89
SRRT-219ENST00000641476 ST20-MTHFSA0A0A6YYL1 179 aa20.61■□□□□ 0.89
SRRT-219ENST00000641476 KLHL34Q8N239 644 aa20.61■□□□□ 0.89
SRRT-219ENST00000641476 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
SRRT-219ENST00000641476 USP47Q96K76 1375 aa20.6■□□□□ 0.89
SRRT-219ENST00000641476 GIGYF1O75420 1035 aaPredicted RBP20.6■□□□□ 0.89
SRRT-219ENST00000641476 ZNF827Q17R98 1081 aa20.6■□□□□ 0.89
SRRT-219ENST00000641476 TERF2IPQ9NYB0 399 aa20.6■□□□□ 0.89
SRRT-219ENST00000641476 PELP1Q8IZL8 1130 aaKnown RBP20.59■□□□□ 0.89
SRRT-219ENST00000641476 ERBB3P21860 1342 aa20.58■□□□□ 0.89
SRRT-219ENST00000641476 NHSQ6T4R5 1651 aa20.58■□□□□ 0.89
SRRT-219ENST00000641476 FAM208AQ9UK61 1670 aaKnown RBP20.58■□□□□ 0.89
SRRT-219ENST00000641476 PAPPAQ13219 1627 aa20.57■□□□□ 0.88
SRRT-219ENST00000641476 IFFO2Q5TF58 517 aa20.57■□□□□ 0.88
SRRT-219ENST00000641476 CHD4Q14839 1912 aa20.56■□□□□ 0.88
SRRT-219ENST00000641476 NLRP2Q9NX02 1062 aa20.55■□□□□ 0.88
SRRT-219ENST00000641476 ANKRD36BQ8N2N9 1353 aa20.55■□□□□ 0.88
SRRT-219ENST00000641476 LRRC4BQ9NT99 713 aa20.54■□□□□ 0.88
SRRT-219ENST00000641476 IL2RBP14784 551 aa20.53■□□□□ 0.88
SRRT-219ENST00000641476 POLD1P28340 1107 aa20.53■□□□□ 0.88
SRRT-219ENST00000641476 KIF20BQ96Q89 1820 aa20.53■□□□□ 0.88
SRRT-219ENST00000641476 SLC24A1O60721 1099 aa20.51■□□□□ 0.87
SRRT-219ENST00000641476 GOLGB1Q14789 3259 aaKnown RBP20.5■□□□□ 0.87
SRRT-219ENST00000641476 ANKRD24Q8TF21 1146 aa20.5■□□□□ 0.87
SRRT-219ENST00000641476 AKT1S1Q96B36 256 aa20.5■□□□□ 0.87
SRRT-219ENST00000641476 TMF1P82094 1093 aa20.49■□□□□ 0.87
SRRT-219ENST00000641476 NLGN2Q8NFZ4 835 aa20.49■□□□□ 0.87
SRRT-219ENST00000641476 PNPLA7Q6ZV29 1317 aa20.49■□□□□ 0.87
SRRT-219ENST00000641476 SLC16A10Q8TF71 515 aa20.48■□□□□ 0.87
SRRT-219ENST00000641476 BTAF1O14981 1849 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms