RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 RGPD3A6NKT7 1758 aaPredicted RBP25.9■■□□□ 1.74
VPS72-207ENST00000640458 RGPD4Q7Z3J3 1758 aa25.9■■□□□ 1.74
VPS72-207ENST00000640458 TOM1L2Q6ZVM7 507 aa25.9■■□□□ 1.74
VPS72-207ENST00000640458 PROM2Q8N271 834 aa25.9■■□□□ 1.74
VPS72-207ENST00000640458 SBF2Q86WG5 1849 aa25.9■■□□□ 1.74
VPS72-207ENST00000640458 PTGER2P43116 358 aa25.89■■□□□ 1.74
VPS72-207ENST00000640458 MYOM1P52179 1685 aa25.87■■□□□ 1.73
VPS72-207ENST00000640458 LRRC37A3O60309 1634 aa25.87■■□□□ 1.73
VPS72-207ENST00000640458 SENP3-EIF4A1A0A087X0R7 540 aa25.86■■□□□ 1.73
VPS72-207ENST00000640458 SRPK2P78362 688 aaKnown RBP25.86■■□□□ 1.73
VPS72-207ENST00000640458 STK32BQ9NY57 414 aa25.86■■□□□ 1.73
VPS72-207ENST00000640458 NLRP6P59044 892 aa25.85■■□□□ 1.73
VPS72-207ENST00000640458 MARCH10Q8NA82 808 aaPredicted RBP25.85■■□□□ 1.73
VPS72-207ENST00000640458 SYT17Q9BSW7 474 aa25.85■■□□□ 1.73
VPS72-207ENST00000640458 FHDC1Q9C0D6 1143 aaPredicted RBP25.85■■□□□ 1.73
VPS72-207ENST00000640458 PPIP5K1Q6PFW1 1433 aa25.85■■□□□ 1.73
VPS72-207ENST00000640458 AATKQ6ZMQ8 1374 aa25.84■■□□□ 1.73
VPS72-207ENST00000640458 TXNRD1Q16881 649 aa25.82■■□□□ 1.72
VPS72-207ENST00000640458 CARD11Q9BXL7 1154 aa25.82■■□□□ 1.72
VPS72-207ENST00000640458 CABP2Q9NPB3 220 aa25.82■■□□□ 1.72
VPS72-207ENST00000640458 SLC15A2Q16348 729 aa25.81■■□□□ 1.72
VPS72-207ENST00000640458 TIMELESSQ9UNS1 1208 aa25.81■■□□□ 1.72
VPS72-207ENST00000640458 CDCA7Q9BWT1 371 aaPredicted RBP25.79■■□□□ 1.72
VPS72-207ENST00000640458 AXIN2Q9Y2T1 843 aa25.79■■□□□ 1.72
VPS72-207ENST00000640458 WDR17Q8IZU2 1322 aa25.79■■□□□ 1.72
VPS72-207ENST00000640458 C1QTNF8P60827 252 aa25.78■■□□□ 1.72
VPS72-207ENST00000640458 MTFR1LQ9H019 292 aa25.78■■□□□ 1.72
VPS72-207ENST00000640458 BRD4O60885 1362 aaPredicted RBP25.78■■□□□ 1.72
VPS72-207ENST00000640458 QRICH2Q9H0J4 1663 aa25.77■■□□□ 1.72
VPS72-207ENST00000640458 CSB-PGBD3P0DP91 1061 aa25.76■■□□□ 1.71
VPS72-207ENST00000640458 CABP1Q9NZU7 370 aa25.76■■□□□ 1.71
VPS72-207ENST00000640458 BCL9O00512 1426 aa25.76■■□□□ 1.71
VPS72-207ENST00000640458 CCER1Q8TC90 406 aaPredicted RBP25.75■■□□□ 1.71
VPS72-207ENST00000640458 UTRNP46939 3433 aa25.75■■□□□ 1.71
VPS72-207ENST00000640458 AKAP12Q02952 1782 aa25.74■■□□□ 1.71
VPS72-207ENST00000640458 SLIT3O75094 1523 aa25.74■■□□□ 1.71
VPS72-207ENST00000640458 USP6P35125 1406 aa25.74■■□□□ 1.71
VPS72-207ENST00000640458 EVC2Q86UK5 1308 aa25.74■■□□□ 1.71
VPS72-207ENST00000640458 EXOC5O00471 708 aa25.74■■□□□ 1.71
VPS72-207ENST00000640458 CHD4Q14839 1912 aa25.73■■□□□ 1.71
VPS72-207ENST00000640458 SGIP1Q9BQI5 828 aa25.73■■□□□ 1.71
VPS72-207ENST00000640458 WNK3Q9BYP7 1800 aa25.72■■□□□ 1.71
VPS72-207ENST00000640458 COL18A1P39060 1754 aa25.72■■□□□ 1.71
VPS72-207ENST00000640458 ARXQ96QS3 562 aa25.72■■□□□ 1.71
VPS72-207ENST00000640458 SOX12O15370 315 aa25.71■■□□□ 1.71
VPS72-207ENST00000640458 CARD10Q9BWT7 1032 aa25.71■■□□□ 1.71
VPS72-207ENST00000640458 SBNO2Q9Y2G9 1366 aa25.7■■□□□ 1.71
VPS72-207ENST00000640458 ARHGEF25Q86VW2 580 aa25.69■■□□□ 1.7
VPS72-207ENST00000640458 CPSF1Q10570 1443 aaKnown RBP25.69■■□□□ 1.7
VPS72-207ENST00000640458 GPR162Q16538 588 aa25.67■■□□□ 1.7
VPS72-207ENST00000640458 ACSBG1Q96GR2 724 aa25.67■■□□□ 1.7
VPS72-207ENST00000640458 PIK3C2AO00443 1686 aa25.66■■□□□ 1.7
VPS72-207ENST00000640458 RGPD5Q99666 1765 aa25.65■■□□□ 1.7
VPS72-207ENST00000640458 KCNH5Q8NCM2 988 aa25.65■■□□□ 1.7
VPS72-207ENST00000640458 KLHL34Q8N239 644 aa25.62■■□□□ 1.69
VPS72-207ENST00000640458 TTC21BQ7Z4L5 1316 aa25.62■■□□□ 1.69
VPS72-207ENST00000640458 CCDC7Q96M83 1385 aa25.61■■□□□ 1.69
VPS72-207ENST00000640458 MAP3K5Q99683 1374 aa25.61■■□□□ 1.69
VPS72-207ENST00000640458 ST20-MTHFSA0A0A6YYL1 179 aa25.6■■□□□ 1.69
VPS72-207ENST00000640458 GIGYF1O75420 1035 aaPredicted RBP25.6■■□□□ 1.69
VPS72-207ENST00000640458 IFFO2Q5TF58 517 aa25.6■■□□□ 1.69
VPS72-207ENST00000640458 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
VPS72-207ENST00000640458 TNS2Q63HR2 1409 aa25.6■■□□□ 1.69
VPS72-207ENST00000640458 ZNF827Q17R98 1081 aa25.59■■□□□ 1.69
VPS72-207ENST00000640458 TESK2Q96S53 571 aa25.58■■□□□ 1.69
VPS72-207ENST00000640458 NHSQ6T4R5 1651 aa25.58■■□□□ 1.68
VPS72-207ENST00000640458 SLC24A1O60721 1099 aa25.57■■□□□ 1.68
VPS72-207ENST00000640458 ZNF692Q9BU19 519 aaPredicted RBP25.57■■□□□ 1.68
VPS72-207ENST00000640458 PUS7Q96PZ0 661 aaKnown RBP25.56■■□□□ 1.68
VPS72-207ENST00000640458 NLRP2Q9NX02 1062 aa25.55■■□□□ 1.68
VPS72-207ENST00000640458 PAPPAQ13219 1627 aa25.55■■□□□ 1.68
VPS72-207ENST00000640458 USP47Q96K76 1375 aa25.55■■□□□ 1.68
VPS72-207ENST00000640458 KAT6BQ8WYB5 2073 aa25.54■■□□□ 1.68
VPS72-207ENST00000640458 LRRC4BQ9NT99 713 aa25.54■■□□□ 1.68
VPS72-207ENST00000640458 TTC21AQ8NDW8 1320 aa25.53■■□□□ 1.68
VPS72-207ENST00000640458 POLD1P28340 1107 aa25.52■■□□□ 1.68
VPS72-207ENST00000640458 NFAT5O94916 1531 aa25.52■■□□□ 1.68
VPS72-207ENST00000640458 IL2RBP14784 551 aa25.51■■□□□ 1.67
VPS72-207ENST00000640458 ABCC6O95255 1503 aa25.51■■□□□ 1.67
VPS72-207ENST00000640458 BTAF1O14981 1849 aa25.51■■□□□ 1.67
VPS72-207ENST00000640458 SLC16A10Q8TF71 515 aa25.5■■□□□ 1.67
VPS72-207ENST00000640458 AKT1S1Q96B36 256 aa25.49■■□□□ 1.67
VPS72-207ENST00000640458 KTN1Q86UP2 1357 aaKnown RBP25.47■■□□□ 1.67
VPS72-207ENST00000640458 ERBB3P21860 1342 aa25.47■■□□□ 1.67
VPS72-207ENST00000640458 NLGN2Q8NFZ4 835 aa25.46■■□□□ 1.67
VPS72-207ENST00000640458 TMC1Q8TDI8 760 aa25.46■■□□□ 1.67
VPS72-207ENST00000640458 TMF1P82094 1093 aa25.45■■□□□ 1.66
VPS72-207ENST00000640458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.45■■□□□ 1.66
VPS72-207ENST00000640458 SLC12A5Q9H2X9 1139 aa25.45■■□□□ 1.66
VPS72-207ENST00000640458 TFCP2L1Q9NZI6 479 aa25.45■■□□□ 1.66
VPS72-207ENST00000640458 PNPLA7Q6ZV29 1317 aa25.44■■□□□ 1.66
VPS72-207ENST00000640458 SLC27A3Q5K4L6 730 aa25.44■■□□□ 1.66
VPS72-207ENST00000640458 KCNQ4P56696 695 aa25.43■■□□□ 1.66
VPS72-207ENST00000640458 ANKRD24Q8TF21 1146 aa25.43■■□□□ 1.66
VPS72-207ENST00000640458 DDX54Q8TDD1 881 aaKnown RBP25.42■■□□□ 1.66
VPS72-207ENST00000640458 CD163L1Q9NR16 1453 aa25.41■■□□□ 1.66
VPS72-207ENST00000640458 SHANK3Q9BYB0 1731 aa25.41■■□□□ 1.66
VPS72-207ENST00000640458 HDGFL2Q7Z4V5 671 aaPredicted RBP25.41■■□□□ 1.66
VPS72-207ENST00000640458 GRIN3BO60391 1043 aa25.39■■□□□ 1.66
VPS72-207ENST00000640458 YBX3P16989 372 aaKnown RBP eCLIP25.39■■□□□ 1.662e-6■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms