RNA–Protein interactions for RNA: ENST00000638786.1

ATM-227, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-227ENST00000638786 FAM174AQ8TBP5 190 aa11.16□□□□□ -0.62
ATM-227ENST00000638786 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
ATM-227ENST00000638786 IFT140Q96RY7 1462 aa11.16□□□□□ -0.62
ATM-227ENST00000638786 FGD5Q6ZNL6 1462 aa11.15□□□□□ -0.62
ATM-227ENST00000638786 TTC24A2A3L6 582 aaPredicted RBP11.15□□□□□ -0.62
ATM-227ENST00000638786 RAD21O60216 631 aa11.15□□□□□ -0.62
ATM-227ENST00000638786 ABL2P42684 1182 aa11.15□□□□□ -0.62
ATM-227ENST00000638786 GPSM3Q9Y4H4 160 aa11.15□□□□□ -0.62
ATM-227ENST00000638786 COG6Q9Y2V7 657 aa11.14□□□□□ -0.63
ATM-227ENST00000638786 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
ATM-227ENST00000638786 AQRO60306 1485 aaKnown RBP eCLIP11.13□□□□□ -0.63
ATM-227ENST00000638786 SOGA1O94964 1423 aa11.13□□□□□ -0.63
ATM-227ENST00000638786 ZBBXA8MT70 800 aa11.13□□□□□ -0.63
ATM-227ENST00000638786 SIAH2O43255 324 aa11.13□□□□□ -0.63
ATM-227ENST00000638786 SNIP1Q8TAD8 396 aaKnown RBP11.13□□□□□ -0.63
ATM-227ENST00000638786 GPR37L1O60883 481 aa11.12□□□□□ -0.63
ATM-227ENST00000638786 ARID5BQ14865 1188 aa11.12□□□□□ -0.63
ATM-227ENST00000638786 ADAM32Q8TC27 787 aa11.12□□□□□ -0.63
ATM-227ENST00000638786 POM121Q96HA1 1249 aa11.12□□□□□ -0.63
ATM-227ENST00000638786 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
ATM-227ENST00000638786 TDRD9Q8NDG6 1382 aaKnown RBP11.12□□□□□ -0.63
ATM-227ENST00000638786 ALDH1A1P00352 501 aa11.11□□□□□ -0.63
ATM-227ENST00000638786 FBXO45P0C2W1 286 aa11.11□□□□□ -0.63
ATM-227ENST00000638786 ERFEQ4G0M1 354 aa11.11□□□□□ -0.63
ATM-227ENST00000638786 TOR4AQ9NXH8 423 aa11.11□□□□□ -0.63
ATM-227ENST00000638786 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
ATM-227ENST00000638786 LAPTM4AQ15012 233 aa11.1□□□□□ -0.63
ATM-227ENST00000638786 C1QTNF2Q9BXJ5 285 aa11.1□□□□□ -0.63
ATM-227ENST00000638786 TLL2Q9Y6L7 1015 aa11.1□□□□□ -0.63
ATM-227ENST00000638786 SYNJ1O43426 1573 aa11.09□□□□□ -0.63
ATM-227ENST00000638786 NRG2O14511 850 aaPredicted RBP11.09□□□□□ -0.63
ATM-227ENST00000638786 NR1H3Q13133 447 aa11.09□□□□□ -0.63
ATM-227ENST00000638786 IRF5Q13568 498 aa11.09□□□□□ -0.63
ATM-227ENST00000638786 J3QL48 77 aa11.08□□□□□ -0.64
ATM-227ENST00000638786 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
ATM-227ENST00000638786 WRNQ14191 1432 aaPredicted RBP eCLIP11.08□□□□□ -0.64
ATM-227ENST00000638786 FAM187AA6NFU0 413 aa11.07□□□□□ -0.64
ATM-227ENST00000638786 TRAF7Q6Q0C0 670 aa11.07□□□□□ -0.64
ATM-227ENST00000638786 DZIP3Q86Y13 1208 aaKnown RBP11.07□□□□□ -0.64
ATM-227ENST00000638786 WWC1Q8IX03 1113 aa11.07□□□□□ -0.64
ATM-227ENST00000638786 SLC10A4Q96EP9 437 aa11.07□□□□□ -0.64
ATM-227ENST00000638786 WASF2Q9Y6W5 498 aa11.07□□□□□ -0.64
ATM-227ENST00000638786 TRMT44Q8IYL2 757 aaKnown RBP11.06□□□□□ -0.64
ATM-227ENST00000638786 MPNDQ8N594 471 aa11.06□□□□□ -0.64
ATM-227ENST00000638786 ZNF330Q9Y3S2 320 aaPredicted RBP11.06□□□□□ -0.64
ATM-227ENST00000638786 PCDHB9Q9Y5E1 797 aa11.06□□□□□ -0.64
ATM-227ENST00000638786 SMPD1P17405 629 aa11.05□□□□□ -0.64
ATM-227ENST00000638786 VAC14Q08AM6 782 aa11.05□□□□□ -0.64
ATM-227ENST00000638786 VASH1Q7L8A9 365 aaPredicted RBP11.05□□□□□ -0.64
ATM-227ENST00000638786 CDK15Q96Q40 435 aa11.05□□□□□ -0.64
ATM-227ENST00000638786 WASHC4Q2M389 1173 aa11.04□□□□□ -0.64
ATM-227ENST00000638786 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
ATM-227ENST00000638786 TOP2BQ02880 1626 aa11.04□□□□□ -0.64
ATM-227ENST00000638786 BIVM-ERCC5R4GMW8 1640 aa11.04□□□□□ -0.64
ATM-227ENST00000638786 WDR97A6NE52 1622 aa11.03□□□□□ -0.64
ATM-227ENST00000638786 ADH1CP00326 375 aa11.02□□□□□ -0.65
ATM-227ENST00000638786 CDV3Q9UKY7 258 aaKnown RBP11.02□□□□□ -0.65
ATM-227ENST00000638786 MAP4K5Q9Y4K4 846 aa11.02□□□□□ -0.65
ATM-227ENST00000638786 DGAT1O75907 488 aa11.01□□□□□ -0.65
ATM-227ENST00000638786 GRM5P41594 1212 aa11.01□□□□□ -0.65
ATM-227ENST00000638786 EIF4G2P78344 907 aaKnown RBP eCLIP11.01□□□□□ -0.65
ATM-227ENST00000638786 CHD1O14646 1710 aa11.01□□□□□ -0.65
ATM-227ENST00000638786 KCTD15Q96SI1 283 aaPredicted RBP11□□□□□ -0.65
ATM-227ENST00000638786 SNAPC4Q5SXM2 1469 aa11□□□□□ -0.65
ATM-227ENST00000638786 FSHRP23945 695 aa10.99□□□□□ -0.65
ATM-227ENST00000638786 NR5A1Q13285 461 aa10.99□□□□□ -0.65
ATM-227ENST00000638786 NNTQ13423 1086 aa10.99□□□□□ -0.65
ATM-227ENST00000638786 NBPF20Q3BBV1 942 aa10.99□□□□□ -0.65
ATM-227ENST00000638786 PROSER2Q86WR7 435 aaPredicted RBP10.99□□□□□ -0.65
ATM-227ENST00000638786 ZNF592Q92610 1267 aa10.99□□□□□ -0.65
ATM-227ENST00000638786 HPS1Q92902 700 aa10.99□□□□□ -0.65
ATM-227ENST00000638786 GAPVD1Q14C86 1478 aa10.99□□□□□ -0.65
ATM-227ENST00000638786 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
ATM-227ENST00000638786 A6NJR5 290 aa10.98□□□□□ -0.65
ATM-227ENST00000638786 MCCD1P59942 119 aaPredicted RBP10.98□□□□□ -0.65
ATM-227ENST00000638786 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
ATM-227ENST00000638786 RAB15P59190 212 aa10.97□□□□□ -0.65
ATM-227ENST00000638786 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
ATM-227ENST00000638786 ABCA5Q8WWZ7 1642 aa10.97□□□□□ -0.65
ATM-227ENST00000638786 NR3C2P08235 984 aa10.96□□□□□ -0.65
ATM-227ENST00000638786 SEMA3FQ13275 785 aa10.96□□□□□ -0.65
ATM-227ENST00000638786 GIGYF1O75420 1035 aaPredicted RBP10.95□□□□□ -0.66
ATM-227ENST00000638786 INTS6LQ5JSJ4 861 aaKnown RBP10.94□□□□□ -0.66
ATM-227ENST00000638786 C14orf37Q86TY3 774 aa10.94□□□□□ -0.66
ATM-227ENST00000638786 CCDC116Q8IYX3 515 aa10.94□□□□□ -0.66
ATM-227ENST00000638786 FNBP4Q8N3X1 1017 aaPredicted RBP10.94□□□□□ -0.66
ATM-227ENST00000638786 CHMP7Q8WUX9 453 aaPredicted RBP10.94□□□□□ -0.66
ATM-227ENST00000638786 ZMYND15Q9H091 742 aa10.94□□□□□ -0.66
ATM-227ENST00000638786 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
ATM-227ENST00000638786 AVPP01185 164 aa10.93□□□□□ -0.66
ATM-227ENST00000638786 SOX11P35716 441 aa10.93□□□□□ -0.66
ATM-227ENST00000638786 CEP126Q9P2H0 1117 aa10.93□□□□□ -0.66
ATM-227ENST00000638786 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
ATM-227ENST00000638786 MYT1Q01538 1121 aa10.92□□□□□ -0.66
ATM-227ENST00000638786 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
ATM-227ENST00000638786 ESPNB1AK53 854 aa10.91□□□□□ -0.66
ATM-227ENST00000638786 DHX9Q08211 1270 aaKnown RBP10.91□□□□□ -0.66
ATM-227ENST00000638786 RNF20Q5VTR2 975 aa10.91□□□□□ -0.66
ATM-227ENST00000638786 ZNF775Q96BV0 537 aaPredicted RBP10.91□□□□□ -0.66
ATM-227ENST00000638786 AXIN1O15169 862 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms