RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
CACNA1A-223ENST00000636058 IP6K1Q92551 441 aa12.79□□□□□ -0.36
CACNA1A-223ENST00000636058 NUDCQ9Y266 331 aa12.79□□□□□ -0.36
CACNA1A-223ENST00000636058 COL18A1P39060 1754 aa12.79□□□□□ -0.36
CACNA1A-223ENST00000636058 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-223ENST00000636058 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
CACNA1A-223ENST00000636058 ZC3H6P61129 1189 aaKnown RBP12.77□□□□□ -0.37
CACNA1A-223ENST00000636058 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
CACNA1A-223ENST00000636058 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
CACNA1A-223ENST00000636058 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
CACNA1A-223ENST00000636058 LMO7Q8WWI1 1683 aa12.76□□□□□ -0.37
CACNA1A-223ENST00000636058 HNRNPUQ00839 825 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNA1A-223ENST00000636058 RGPD5Q99666 1765 aa12.75□□□□□ -0.37
CACNA1A-223ENST00000636058 ZBTB7CA1YPR0 619 aa12.74□□□□□ -0.37
CACNA1A-223ENST00000636058 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
CACNA1A-223ENST00000636058 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
CACNA1A-223ENST00000636058 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
CACNA1A-223ENST00000636058 FCHSD2O94868 740 aa12.73□□□□□ -0.37
CACNA1A-223ENST00000636058 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-223ENST00000636058 CCDC146Q8IYE0 955 aa12.73□□□□□ -0.37
CACNA1A-223ENST00000636058 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
CACNA1A-223ENST00000636058 KDRP35968 1356 aa12.72□□□□□ -0.37
CACNA1A-223ENST00000636058 JCADQ9P266 1359 aa12.72□□□□□ -0.37
CACNA1A-223ENST00000636058 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
CACNA1A-223ENST00000636058 RUNDC1Q96C34 613 aa12.72□□□□□ -0.37
CACNA1A-223ENST00000636058 EYA1Q99502 592 aa12.72□□□□□ -0.37
CACNA1A-223ENST00000636058 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
CACNA1A-223ENST00000636058 PRDM11Q9NQV5 511 aa12.72□□□□□ -0.37
CACNA1A-223ENST00000636058 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-223ENST00000636058 NCAPD2Q15021 1401 aa12.71□□□□□ -0.37
CACNA1A-223ENST00000636058 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-223ENST00000636058 ERBB3P21860 1342 aa12.71□□□□□ -0.37
CACNA1A-223ENST00000636058 ZBED9Q6R2W3 1325 aa12.71□□□□□ -0.37
CACNA1A-223ENST00000636058 HMOX1P09601 288 aa12.71□□□□□ -0.37
CACNA1A-223ENST00000636058 ANKRD24Q8TF21 1146 aa12.71□□□□□ -0.37
CACNA1A-223ENST00000636058 LTV1Q96GA3 475 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-223ENST00000636058 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-223ENST00000636058 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
CACNA1A-223ENST00000636058 PRKAR2BP31323 418 aa12.7□□□□□ -0.38
CACNA1A-223ENST00000636058 SULT6B1Q6IMI4 303 aa12.7□□□□□ -0.38
CACNA1A-223ENST00000636058 FAM83GA6ND36 823 aa12.69□□□□□ -0.38
CACNA1A-223ENST00000636058 APAF1O14727 1248 aa12.69□□□□□ -0.38
CACNA1A-223ENST00000636058 HSPA1LP34931 641 aa12.69□□□□□ -0.38
CACNA1A-223ENST00000636058 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
CACNA1A-223ENST00000636058 COL5A2P05997 1499 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-223ENST00000636058 NBPF6Q5VWK0 638 aa12.68□□□□□ -0.38
CACNA1A-223ENST00000636058 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
CACNA1A-223ENST00000636058 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
CACNA1A-223ENST00000636058 NBPF4Q96M43 638 aa12.68□□□□□ -0.38
CACNA1A-223ENST00000636058 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
CACNA1A-223ENST00000636058 SPATA31A6Q5VVP1 1343 aa12.67□□□□□ -0.38
CACNA1A-223ENST00000636058 MAPK8IP3Q9UPT6 1336 aa12.67□□□□□ -0.38
CACNA1A-223ENST00000636058 SENP3-EIF4A1A0A087X0R7 540 aa12.67□□□□□ -0.38
CACNA1A-223ENST00000636058 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-223ENST00000636058 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
CACNA1A-223ENST00000636058 WDR17Q8IZU2 1322 aa12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 ZNF521Q96K83 1311 aa12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 NEFMP07197 916 aa12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 ILDR1Q86SU0 546 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 LRP6O75581 1613 aa12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 NRAPQ86VF7 1730 aa12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
CACNA1A-223ENST00000636058 NUTM2BA6NNL0 878 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 NUTM2EB1AL46 878 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 ADAMTS2O95450 1211 aa12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 CSB-PGBD3P0DP91 1061 aa12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 NUTM2AQ8IVF1 878 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 BTG4Q9NY30 223 aa12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-223ENST00000636058 SLIT2O94813 1529 aa12.63□□□□□ -0.39
CACNA1A-223ENST00000636058 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-223ENST00000636058 NFE2L2Q16236 605 aa12.63□□□□□ -0.39
CACNA1A-223ENST00000636058 NLRP2Q9NX02 1062 aa12.63□□□□□ -0.39
CACNA1A-223ENST00000636058 RRP7AQ9Y3A4 280 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-223ENST00000636058 DLG5Q8TDM6 1919 aa12.62□□□□□ -0.39
CACNA1A-223ENST00000636058 PLEKHG2Q9H7P9 1386 aa12.62□□□□□ -0.39
CACNA1A-223ENST00000636058 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
CACNA1A-223ENST00000636058 CRB1P82279 1406 aa12.62□□□□□ -0.39
CACNA1A-223ENST00000636058 RIPK4P57078 832 aa12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 EVA1CP58658 441 aa12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 PDE3BQ13370 1112 aa12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 NEUROD2Q15784 382 aa12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 LARP1Q6PKG0 1096 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 TOM1L2Q6ZVM7 507 aa12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 STRN4Q9NRL3 753 aa12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
CACNA1A-223ENST00000636058 MTHFSDQ2M296 383 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-223ENST00000636058 MEGF6O75095 1541 aa12.6□□□□□ -0.39
CACNA1A-223ENST00000636058 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-223ENST00000636058 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
CACNA1A-223ENST00000636058 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
CACNA1A-223ENST00000636058 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-223ENST00000636058 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
CACNA1A-223ENST00000636058 LMOD3Q0VAK6 560 aa12.58□□□□□ -0.4
CACNA1A-223ENST00000636058 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms