RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 SHPRHQ149N8 1683 aa18.74■□□□□ 0.59
MECP2-217ENST00000628176 COL22A1Q8NFW1 1626 aaPredicted RBP18.74■□□□□ 0.59
MECP2-217ENST00000628176 ADAMTS2O95450 1211 aa18.74■□□□□ 0.59
MECP2-217ENST00000628176 HAP1P54257 671 aaPredicted RBP18.74■□□□□ 0.59
MECP2-217ENST00000628176 SLIT3O75094 1523 aa18.74■□□□□ 0.59
MECP2-217ENST00000628176 NFAT5O94916 1531 aa18.73■□□□□ 0.59
MECP2-217ENST00000628176 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
MECP2-217ENST00000628176 CHRNA2Q15822 529 aa18.73■□□□□ 0.59
MECP2-217ENST00000628176 LTN1O94822 1766 aa18.72■□□□□ 0.59
MECP2-217ENST00000628176 PPP2R1AP30153 589 aa18.71■□□□□ 0.59
MECP2-217ENST00000628176 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
MECP2-217ENST00000628176 MAP3K19Q56UN5 1328 aa18.71■□□□□ 0.59
MECP2-217ENST00000628176 KIAA0232Q92628 1395 aa18.7■□□□□ 0.58
MECP2-217ENST00000628176 LRP6O75581 1613 aa18.7■□□□□ 0.58
MECP2-217ENST00000628176 PEAK1Q9H792 1746 aa18.69■□□□□ 0.58
MECP2-217ENST00000628176 MTHFSP49914 203 aa18.69■□□□□ 0.58
MECP2-217ENST00000628176 KCNH5Q8NCM2 988 aa18.69■□□□□ 0.58
MECP2-217ENST00000628176 RGPD5Q99666 1765 aa18.68■□□□□ 0.58
MECP2-217ENST00000628176 FAM83GA6ND36 823 aa18.68■□□□□ 0.58
MECP2-217ENST00000628176 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
MECP2-217ENST00000628176 AXIN2Q9Y2T1 843 aa18.67■□□□□ 0.58
MECP2-217ENST00000628176 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
MECP2-217ENST00000628176 BLMP54132 1417 aaPredicted RBP18.66■□□□□ 0.58
MECP2-217ENST00000628176 AATKQ6ZMQ8 1374 aa18.66■□□□□ 0.58
MECP2-217ENST00000628176 AMPHP49418 695 aa18.66■□□□□ 0.58
MECP2-217ENST00000628176 ILDR2Q71H61 639 aa18.66■□□□□ 0.58
MECP2-217ENST00000628176 PRDM11Q9NQV5 511 aa18.66■□□□□ 0.58
MECP2-217ENST00000628176 CCDC136Q96JN2 1154 aa18.65■□□□□ 0.58
MECP2-217ENST00000628176 LTV1Q96GA3 475 aaPredicted RBP18.64■□□□□ 0.57
MECP2-217ENST00000628176 COL18A1P39060 1754 aa18.64■□□□□ 0.57
MECP2-217ENST00000628176 SPATA31A6Q5VVP1 1343 aa18.63■□□□□ 0.57
MECP2-217ENST00000628176 HOXC9P31274 260 aa18.63■□□□□ 0.57
MECP2-217ENST00000628176 C8orf37Q96NL8 207 aa18.63■□□□□ 0.57
MECP2-217ENST00000628176 CPDO75976 1380 aa18.61■□□□□ 0.57
MECP2-217ENST00000628176 RRP1P56182 461 aaKnown RBP18.61■□□□□ 0.57
MECP2-217ENST00000628176 IP6K1Q92551 441 aa18.6■□□□□ 0.57
MECP2-217ENST00000628176 CAMTA1Q9Y6Y1 1673 aa18.6■□□□□ 0.57
MECP2-217ENST00000628176 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
MECP2-217ENST00000628176 BTG4Q9NY30 223 aa18.6■□□□□ 0.57
MECP2-217ENST00000628176 ERICH6Q7L0X2 663 aa18.59■□□□□ 0.57
MECP2-217ENST00000628176 RGPD2P0DJD1 1756 aa18.59■□□□□ 0.57
MECP2-217ENST00000628176 NGLY1Q96IV0 654 aa18.58■□□□□ 0.57
MECP2-217ENST00000628176 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.57
MECP2-217ENST00000628176 FLT4P35916 1363 aa18.58■□□□□ 0.56
MECP2-217ENST00000628176 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
MECP2-217ENST00000628176 PLCH1Q4KWH8 1693 aa18.57■□□□□ 0.56
MECP2-217ENST00000628176 LMO7Q8WWI1 1683 aa18.57■□□□□ 0.56
MECP2-217ENST00000628176 EIF4A2Q14240 407 aaKnown RBP18.57■□□□□ 0.56
MECP2-217ENST00000628176 CFAP53Q96M91 514 aa18.57■□□□□ 0.56
MECP2-217ENST00000628176 COL14A1Q05707 1796 aaKnown RBP18.56■□□□□ 0.56
MECP2-217ENST00000628176 COL3A1P02461 1466 aaPredicted RBP18.56■□□□□ 0.56
MECP2-217ENST00000628176 CDK12Q9NYV4 1490 aaPredicted RBP18.56■□□□□ 0.56
MECP2-217ENST00000628176 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
MECP2-217ENST00000628176 SOCS7O14512 581 aa18.55■□□□□ 0.56
MECP2-217ENST00000628176 USHBP1Q8N6Y0 703 aa18.54■□□□□ 0.56
MECP2-217ENST00000628176 RTL1A6NKG5 1358 aa18.54■□□□□ 0.56
MECP2-217ENST00000628176 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
MECP2-217ENST00000628176 IL13P35225 146 aa18.53■□□□□ 0.56
MECP2-217ENST00000628176 DIAPH1O60610 1272 aaKnown RBP18.52■□□□□ 0.56
MECP2-217ENST00000628176 CSB-PGBD3P0DP91 1061 aa18.52■□□□□ 0.56
MECP2-217ENST00000628176 EVA1CP58658 441 aa18.52■□□□□ 0.56
MECP2-217ENST00000628176 COL5A2P05997 1499 aaPredicted RBP18.52■□□□□ 0.56
MECP2-217ENST00000628176 ERBB3P21860 1342 aa18.52■□□□□ 0.56
MECP2-217ENST00000628176 AFF2P51816 1311 aa18.52■□□□□ 0.56
MECP2-217ENST00000628176 SLIT2O94813 1529 aa18.52■□□□□ 0.56
MECP2-217ENST00000628176 U2SURPO15042 1029 aaKnown RBP18.52■□□□□ 0.55
MECP2-217ENST00000628176 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.55
MECP2-217ENST00000628176 NBPF4Q96M43 638 aa18.52■□□□□ 0.55
MECP2-217ENST00000628176 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
MECP2-217ENST00000628176 BCL9LQ86UU0 1499 aa18.51■□□□□ 0.55
MECP2-217ENST00000628176 NRAPQ86VF7 1730 aa18.51■□□□□ 0.55
MECP2-217ENST00000628176 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
MECP2-217ENST00000628176 EYA1Q99502 592 aa18.51■□□□□ 0.55
MECP2-217ENST00000628176 USP35Q9P2H5 1018 aa18.51■□□□□ 0.55
MECP2-217ENST00000628176 NLRP2Q9NX02 1062 aa18.5■□□□□ 0.55
MECP2-217ENST00000628176 SENP3-EIF4A1A0A087X0R7 540 aa18.49■□□□□ 0.55
MECP2-217ENST00000628176 HMOX1P09601 288 aa18.49■□□□□ 0.55
MECP2-217ENST00000628176 MS4A1P11836 297 aa18.49■□□□□ 0.55
MECP2-217ENST00000628176 AEBP1Q8IUX7 1158 aa18.49■□□□□ 0.55
MECP2-217ENST00000628176 FNBP4Q8N3X1 1017 aaPredicted RBP18.49■□□□□ 0.55
MECP2-217ENST00000628176 USP21Q9UK80 565 aa18.49■□□□□ 0.55
MECP2-217ENST00000628176 NOP58Q9Y2X3 529 aaKnown RBP18.49■□□□□ 0.55
MECP2-217ENST00000628176 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
MECP2-217ENST00000628176 TOM1L2Q6ZVM7 507 aa18.48■□□□□ 0.55
MECP2-217ENST00000628176 UNC5CLQ8IV45 518 aa18.48■□□□□ 0.55
MECP2-217ENST00000628176 NWD2Q9ULI1 1742 aa18.48■□□□□ 0.55
MECP2-217ENST00000628176 ABCC6O95255 1503 aa18.47■□□□□ 0.55
MECP2-217ENST00000628176 WDR17Q8IZU2 1322 aa18.47■□□□□ 0.55
MECP2-217ENST00000628176 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
MECP2-217ENST00000628176 ANP32AP39687 249 aaKnown RBP18.46■□□□□ 0.55
MECP2-217ENST00000628176 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
MECP2-217ENST00000628176 CCDC9Q9Y3X0 531 aaKnown RBP18.46■□□□□ 0.55
MECP2-217ENST00000628176 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.55
MECP2-217ENST00000628176 ADAMTS8Q9UP79 889 aa18.46■□□□□ 0.55
MECP2-217ENST00000628176 RGPD1P0DJD0 1748 aa18.45■□□□□ 0.54
MECP2-217ENST00000628176 IPO9Q96P70 1041 aaKnown RBP18.45■□□□□ 0.54
MECP2-217ENST00000628176 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
MECP2-217ENST00000628176 RGS17Q9UGC6 210 aaPredicted RBP18.44■□□□□ 0.54
MECP2-217ENST00000628176 IGSF1Q8N6C5 1336 aa18.43■□□□□ 0.54
MECP2-217ENST00000628176 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms