RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 ZNF784Q8NCA9 323 aaPredicted RBP16.52■□□□□ 0.24
CHRNA4-210ENST00000627869 KCNH5Q8NCM2 988 aa16.52■□□□□ 0.24
CHRNA4-210ENST00000627869 PDGFDQ9GZP0 370 aaPredicted RBP16.52■□□□□ 0.24
CHRNA4-210ENST00000627869 AATKQ6ZMQ8 1374 aa16.51■□□□□ 0.23
CHRNA4-210ENST00000627869 SLC24A1O60721 1099 aa16.51■□□□□ 0.23
CHRNA4-210ENST00000627869 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
CHRNA4-210ENST00000627869 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
CHRNA4-210ENST00000627869 HDGFL2Q7Z4V5 671 aaPredicted RBP16.5■□□□□ 0.23
CHRNA4-210ENST00000627869 ANO8Q9HCE9 1232 aaPredicted RBP16.5■□□□□ 0.23
CHRNA4-210ENST00000627869 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-210ENST00000627869 PEAK1Q9H792 1746 aa16.5■□□□□ 0.23
CHRNA4-210ENST00000627869 SLIT3O75094 1523 aa16.5■□□□□ 0.23
CHRNA4-210ENST00000627869 MYOM1P52179 1685 aa16.5■□□□□ 0.23
CHRNA4-210ENST00000627869 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
CHRNA4-210ENST00000627869 SOX12O15370 315 aa16.49■□□□□ 0.23
CHRNA4-210ENST00000627869 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
CHRNA4-210ENST00000627869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHRNA4-210ENST00000627869 SLC12A5Q9H2X9 1139 aa16.49■□□□□ 0.23
CHRNA4-210ENST00000627869 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
CHRNA4-210ENST00000627869 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
CHRNA4-210ENST00000627869 ARHGEF25Q86VW2 580 aa16.48■□□□□ 0.23
CHRNA4-210ENST00000627869 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
CHRNA4-210ENST00000627869 CEP350Q5VT06 3117 aa16.48■□□□□ 0.23
CHRNA4-210ENST00000627869 RGPD3A6NKT7 1758 aaPredicted RBP16.47■□□□□ 0.23
CHRNA4-210ENST00000627869 RGPD4Q7Z3J3 1758 aa16.47■□□□□ 0.23
CHRNA4-210ENST00000627869 TESK2Q96S53 571 aa16.47■□□□□ 0.23
CHRNA4-210ENST00000627869 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
CHRNA4-210ENST00000627869 CRB1P82279 1406 aa16.46■□□□□ 0.23
CHRNA4-210ENST00000627869 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
CHRNA4-210ENST00000627869 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
CHRNA4-210ENST00000627869 AXIN2Q9Y2T1 843 aa16.46■□□□□ 0.23
CHRNA4-210ENST00000627869 PIK3C2AO00443 1686 aa16.46■□□□□ 0.23
CHRNA4-210ENST00000627869 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
CHRNA4-210ENST00000627869 PTGER2P43116 358 aa16.45■□□□□ 0.22
CHRNA4-210ENST00000627869 NME9Q86XW9 330 aa16.45■□□□□ 0.22
CHRNA4-210ENST00000627869 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
CHRNA4-210ENST00000627869 USP31Q70CQ4 1352 aa16.44■□□□□ 0.22
CHRNA4-210ENST00000627869 GOLGB1Q14789 3259 aaKnown RBP16.44■□□□□ 0.22
CHRNA4-210ENST00000627869 WDR17Q8IZU2 1322 aa16.44■□□□□ 0.22
CHRNA4-210ENST00000627869 CSB-PGBD3P0DP91 1061 aa16.43■□□□□ 0.22
CHRNA4-210ENST00000627869 PROM2Q8N271 834 aa16.43■□□□□ 0.22
CHRNA4-210ENST00000627869 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
CHRNA4-210ENST00000627869 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
CHRNA4-210ENST00000627869 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
CHRNA4-210ENST00000627869 ZBTB7AO95365 584 aa16.42■□□□□ 0.22
CHRNA4-210ENST00000627869 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
CHRNA4-210ENST00000627869 USP47Q96K76 1375 aa16.41■□□□□ 0.22
CHRNA4-210ENST00000627869 PLSCR1O15162 318 aa16.41■□□□□ 0.22
CHRNA4-210ENST00000627869 TMF1P82094 1093 aa16.41■□□□□ 0.22
CHRNA4-210ENST00000627869 AKAP12Q02952 1782 aa16.41■□□□□ 0.22
CHRNA4-210ENST00000627869 OVOS2A0A0G2JMS6 1433 aa16.4■□□□□ 0.22
CHRNA4-210ENST00000627869 OVOS2A0A0J9YW53 1432 aa16.4■□□□□ 0.22
CHRNA4-210ENST00000627869 OVOS2Q6IE36 1432 aa16.4■□□□□ 0.22
CHRNA4-210ENST00000627869 C11orf95C9JLR9 678 aaPredicted RBP16.4■□□□□ 0.22
CHRNA4-210ENST00000627869 C1QTNF8P60827 252 aa16.4■□□□□ 0.22
CHRNA4-210ENST00000627869 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
CHRNA4-210ENST00000627869 CDCA7Q9BWT1 371 aaPredicted RBP16.4■□□□□ 0.22
CHRNA4-210ENST00000627869 CARD10Q9BWT7 1032 aa16.4■□□□□ 0.22
CHRNA4-210ENST00000627869 DDB1Q16531 1140 aa16.39■□□□□ 0.21
CHRNA4-210ENST00000627869 NFAT5O94916 1531 aa16.39■□□□□ 0.21
CHRNA4-210ENST00000627869 CHD4Q14839 1912 aa16.39■□□□□ 0.21
CHRNA4-210ENST00000627869 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
CHRNA4-210ENST00000627869 FHDC1Q9C0D6 1143 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-210ENST00000627869 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-210ENST00000627869 SGIP1Q9BQI5 828 aa16.37■□□□□ 0.21
CHRNA4-210ENST00000627869 SYT17Q9BSW7 474 aa16.37■□□□□ 0.21
CHRNA4-210ENST00000627869 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
CHRNA4-210ENST00000627869 COG3Q96JB2 828 aa16.36■□□□□ 0.21
CHRNA4-210ENST00000627869 BCL11BQ9C0K0 894 aaPredicted RBP16.35■□□□□ 0.21
CHRNA4-210ENST00000627869 COL18A1P39060 1754 aa16.35■□□□□ 0.21
CHRNA4-210ENST00000627869 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
CHRNA4-210ENST00000627869 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
CHRNA4-210ENST00000627869 ABCC6O95255 1503 aa16.35■□□□□ 0.21
CHRNA4-210ENST00000627869 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
CHRNA4-210ENST00000627869 NLRP2Q9NX02 1062 aa16.34■□□□□ 0.21
CHRNA4-210ENST00000627869 ERBB3P21860 1342 aa16.34■□□□□ 0.21
CHRNA4-210ENST00000627869 EXOC5O00471 708 aa16.33■□□□□ 0.2
CHRNA4-210ENST00000627869 MARCH10Q8NA82 808 aaPredicted RBP16.33■□□□□ 0.2
CHRNA4-210ENST00000627869 ANKRD24Q8TF21 1146 aa16.33■□□□□ 0.2
CHRNA4-210ENST00000627869 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
CHRNA4-210ENST00000627869 EIF4G2P78344 907 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHRNA4-210ENST00000627869 IP6K1Q92551 441 aa16.31■□□□□ 0.2
CHRNA4-210ENST00000627869 BCL9O00512 1426 aa16.3■□□□□ 0.2
CHRNA4-210ENST00000627869 SLC15A2Q16348 729 aa16.3■□□□□ 0.2
CHRNA4-210ENST00000627869 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
CHRNA4-210ENST00000627869 USP54Q70EL1 1684 aa16.29■□□□□ 0.2
CHRNA4-210ENST00000627869 MAP3K19Q56UN5 1328 aa16.28■□□□□ 0.2
CHRNA4-210ENST00000627869 FYB1O15117 783 aa16.28■□□□□ 0.2
CHRNA4-210ENST00000627869 IL2RBP14784 551 aa16.28■□□□□ 0.2
CHRNA4-210ENST00000627869 AMPHP49418 695 aa16.28■□□□□ 0.2
CHRNA4-210ENST00000627869 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
CHRNA4-210ENST00000627869 GGNBP2Q9H3C7 697 aa16.28■□□□□ 0.2
CHRNA4-210ENST00000627869 PAPPAQ13219 1627 aa16.27■□□□□ 0.2
CHRNA4-210ENST00000627869 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
CHRNA4-210ENST00000627869 STK32BQ9NY57 414 aa16.27■□□□□ 0.2
CHRNA4-210ENST00000627869 FBLN1P23142 703 aa16.26■□□□□ 0.19
CHRNA4-210ENST00000627869 HOXC9P31274 260 aa16.26■□□□□ 0.19
CHRNA4-210ENST00000627869 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
CHRNA4-210ENST00000627869 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
CHRNA4-210ENST00000627869 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms