RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 SV2AQ7L0J3 742 aa8.59□□□□□ -1.03
VBP1-204ENST00000625964 KRTAP1-3Q8IUG1 177 aa8.59□□□□□ -1.03
VBP1-204ENST00000625964 Q6ZVU0 165 aa8.59□□□□□ -1.03
VBP1-204ENST00000625964 FIGNL2A6NMB9 653 aa8.58□□□□□ -1.04
VBP1-204ENST00000625964 SH3BP5LQ7L8J4 393 aa8.58□□□□□ -1.04
VBP1-204ENST00000625964 GPKOWQ92917 476 aaPredicted RBP eCLIP8.58□□□□□ -1.04
VBP1-204ENST00000625964 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
VBP1-204ENST00000625964 ITGA6P23229 1130 aa8.57□□□□□ -1.04
VBP1-204ENST00000625964 WHAMMQ8TF30 809 aa8.57□□□□□ -1.04
VBP1-204ENST00000625964 PSMG3-AS1Q96PY0 264 aa8.57□□□□□ -1.04
VBP1-204ENST00000625964 PER1O15534 1290 aaPredicted RBP8.56□□□□□ -1.04
VBP1-204ENST00000625964 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
VBP1-204ENST00000625964 VWA5B2Q8N398 1253 aa8.56□□□□□ -1.04
VBP1-204ENST00000625964 KRTAP9-6A0A140TA67 174 aa8.55□□□□□ -1.04
VBP1-204ENST00000625964 BARGINQ6ZT62 677 aa8.55□□□□□ -1.04
VBP1-204ENST00000625964 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
VBP1-204ENST00000625964 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
VBP1-204ENST00000625964 CDV3Q9UKY7 258 aaKnown RBP8.54□□□□□ -1.04
VBP1-204ENST00000625964 KDM2AQ9Y2K7 1162 aa8.54□□□□□ -1.04
VBP1-204ENST00000625964 CDC14CA4D256 554 aa8.54□□□□□ -1.04
VBP1-204ENST00000625964 MAP3K10Q02779 954 aa8.54□□□□□ -1.04
VBP1-204ENST00000625964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
VBP1-204ENST00000625964 DHX9Q08211 1270 aaKnown RBP8.53□□□□□ -1.04
VBP1-204ENST00000625964 CABLES1Q8TDN4 633 aa8.53□□□□□ -1.04
VBP1-204ENST00000625964 ENAMQ9NRM1 1142 aa8.53□□□□□ -1.04
VBP1-204ENST00000625964 MAGEB6P1A0A0J9YX57 407 aa8.52□□□□□ -1.05
VBP1-204ENST00000625964 SRSF11Q05519 484 aaKnown RBP8.52□□□□□ -1.05
VBP1-204ENST00000625964 CBLBQ13191 982 aa8.52□□□□□ -1.05
VBP1-204ENST00000625964 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
VBP1-204ENST00000625964 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
VBP1-204ENST00000625964 ERFEQ4G0M1 354 aa8.51□□□□□ -1.05
VBP1-204ENST00000625964 VSIG10Q8N0Z9 540 aa8.51□□□□□ -1.05
VBP1-204ENST00000625964 TSC1Q92574 1164 aa8.51□□□□□ -1.05
VBP1-204ENST00000625964 NUTM2BA6NNL0 878 aaPredicted RBP8.5□□□□□ -1.05
VBP1-204ENST00000625964 NUTM2EB1AL46 878 aaPredicted RBP8.5□□□□□ -1.05
VBP1-204ENST00000625964 ZMYND10O75800 440 aa8.5□□□□□ -1.05
VBP1-204ENST00000625964 NUTM2DQ5VT03 806 aaPredicted RBP8.5□□□□□ -1.05
VBP1-204ENST00000625964 NUTM2AQ8IVF1 878 aaPredicted RBP8.5□□□□□ -1.05
VBP1-204ENST00000625964 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
VBP1-204ENST00000625964 PHF20L1A8MW92 1017 aa8.49□□□□□ -1.05
VBP1-204ENST00000625964 MSTNO14793 375 aa8.49□□□□□ -1.05
VBP1-204ENST00000625964 LYPD4Q6UWN0 246 aa8.49□□□□□ -1.05
VBP1-204ENST00000625964 ADAM23O75077 832 aa8.49□□□□□ -1.05
VBP1-204ENST00000625964 LILRB3O75022 631 aa8.48□□□□□ -1.05
VBP1-204ENST00000625964 CELA2BP08218 269 aaPredicted RBP8.48□□□□□ -1.05
VBP1-204ENST00000625964 CTSOP43234 321 aaPredicted RBP8.48□□□□□ -1.05
VBP1-204ENST00000625964 CSPP1Q1MSJ5 1256 aa8.48□□□□□ -1.05
VBP1-204ENST00000625964 PDXDC2PQ6P474 469 aa8.48□□□□□ -1.05
VBP1-204ENST00000625964 KCTD15Q96SI1 283 aaPredicted RBP8.48□□□□□ -1.05
VBP1-204ENST00000625964 CARD14Q9BXL6 1004 aa8.48□□□□□ -1.05
VBP1-204ENST00000625964 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.05
VBP1-204ENST00000625964 SLC10A4Q96EP9 437 aa8.46□□□□□ -1.05
VBP1-204ENST00000625964 RNF217Q8TC41 542 aa8.45□□□□□ -1.06
VBP1-204ENST00000625964 GMCL1Q96IK5 515 aa8.45□□□□□ -1.06
VBP1-204ENST00000625964 INSM2Q96T92 566 aaPredicted RBP8.45□□□□□ -1.06
VBP1-204ENST00000625964 POLMQ9NP87 494 aaPredicted RBP8.45□□□□□ -1.06
VBP1-204ENST00000625964 SENP3-EIF4A1A0A087X0R7 540 aa8.44□□□□□ -1.06
VBP1-204ENST00000625964 RELBQ01201 579 aa8.44□□□□□ -1.06
VBP1-204ENST00000625964 PLA2G4EQ3MJ16 856 aa8.44□□□□□ -1.06
VBP1-204ENST00000625964 BEND7Q8N7W2 519 aaPredicted RBP8.44□□□□□ -1.06
VBP1-204ENST00000625964 ARHGAP9Q9BRR9 750 aa8.44□□□□□ -1.06
VBP1-204ENST00000625964 QPCTQ16769 361 aa8.44□□□□□ -1.06
VBP1-204ENST00000625964 DCAF5Q96JK2 942 aa8.44□□□□□ -1.06
VBP1-204ENST00000625964 AGBL1Q96MI9 1066 aa8.44□□□□□ -1.06
VBP1-204ENST00000625964 LIMD1Q9UGP4 676 aa8.44□□□□□ -1.06
VBP1-204ENST00000625964 MYSM1Q5VVJ2 828 aa8.43□□□□□ -1.06
VBP1-204ENST00000625964 SPOCK3Q9BQ16 436 aa8.43□□□□□ -1.06
VBP1-204ENST00000625964 PODNQ7Z5L7 613 aa8.42□□□□□ -1.06
VBP1-204ENST00000625964 ZBTB33Q86T24 672 aa8.42□□□□□ -1.06
VBP1-204ENST00000625964 ZC3H4Q9UPT8 1303 aaKnown RBP8.42□□□□□ -1.06
VBP1-204ENST00000625964 GAS6Q14393 721 aa8.41□□□□□ -1.06
VBP1-204ENST00000625964 INTS6LQ5JSJ4 861 aaKnown RBP8.41□□□□□ -1.06
VBP1-204ENST00000625964 MBIPQ9NS73 344 aa8.41□□□□□ -1.06
VBP1-204ENST00000625964 TRIM52Q96A61 297 aa8.4□□□□□ -1.06
VBP1-204ENST00000625964 TRIM66O15016 1216 aa8.39□□□□□ -1.07
VBP1-204ENST00000625964 RTL5Q5HYW3 569 aaPredicted RBP8.39□□□□□ -1.07
VBP1-204ENST00000625964 FOXR1Q6PIV2 292 aa8.39□□□□□ -1.07
VBP1-204ENST00000625964 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
VBP1-204ENST00000625964 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
VBP1-204ENST00000625964 LRRC4BQ9NT99 713 aa8.39□□□□□ -1.07
VBP1-204ENST00000625964 FKBPLQ9UIM3 349 aa8.39□□□□□ -1.07
VBP1-204ENST00000625964 CNTNAP5Q8WYK1 1306 aa8.39□□□□□ -1.07
VBP1-204ENST00000625964 ADH1AP07327 375 aa8.39□□□□□ -1.07
VBP1-204ENST00000625964 BCRP11274 1271 aa8.39□□□□□ -1.07
VBP1-204ENST00000625964 ZNF395Q9H8N7 513 aaPredicted RBP8.39□□□□□ -1.07
VBP1-204ENST00000625964 PTGIRP43119 386 aa8.38□□□□□ -1.07
VBP1-204ENST00000625964 FOXD4L5Q5VV16 416 aaPredicted RBP8.38□□□□□ -1.07
VBP1-204ENST00000625964 GALNT6Q8NCL4 622 aa8.38□□□□□ -1.07
VBP1-204ENST00000625964 GPSM3Q9Y4H4 160 aa8.38□□□□□ -1.07
VBP1-204ENST00000625964 PROCP04070 461 aa8.37□□□□□ -1.07
VBP1-204ENST00000625964 PTK2Q05397 1052 aa8.37□□□□□ -1.07
VBP1-204ENST00000625964 NBPF20Q3BBV1 942 aa8.37□□□□□ -1.07
VBP1-204ENST00000625964 NEDD1Q8NHV4 660 aa8.37□□□□□ -1.07
VBP1-204ENST00000625964 AK7Q96M32 723 aa8.37□□□□□ -1.07
VBP1-204ENST00000625964 ITGB2P05107 769 aa8.36□□□□□ -1.07
VBP1-204ENST00000625964 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
VBP1-204ENST00000625964 CUEDC1Q9NWM3 386 aaPredicted RBP8.36□□□□□ -1.07
VBP1-204ENST00000625964 IGF1RP08069 1367 aa8.36□□□□□ -1.07
VBP1-204ENST00000625964 LCE3BQ5TA77 95 aa8.35□□□□□ -1.07
VBP1-204ENST00000625964 K7ELQ4 463 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms