RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 CCDC116Q8IYX3 515 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 ENAMQ9NRM1 1142 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 PHF20L1A8MW92 1017 aa9.13□□□□□ -0.95
CUL3-216ENST00000617432 GJA5P36382 358 aa9.13□□□□□ -0.95
CUL3-216ENST00000617432 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
CUL3-216ENST00000617432 DCAF5Q96JK2 942 aa9.13□□□□□ -0.95
CUL3-216ENST00000617432 SRSF11Q05519 484 aaKnown RBP9.12□□□□□ -0.95
CUL3-216ENST00000617432 CELA2BP08218 269 aaPredicted RBP9.11□□□□□ -0.95
CUL3-216ENST00000617432 Q6ZVU0 165 aa9.11□□□□□ -0.95
CUL3-216ENST00000617432 TRMT44Q8IYL2 757 aaKnown RBP9.11□□□□□ -0.95
CUL3-216ENST00000617432 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
CUL3-216ENST00000617432 CFAP99D6REC4 459 aa9.09□□□□□ -0.95
CUL3-216ENST00000617432 SH3RF1Q7Z6J0 888 aa9.09□□□□□ -0.95
CUL3-216ENST00000617432 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
CUL3-216ENST00000617432 ITGB2P05107 769 aa9.08□□□□□ -0.96
CUL3-216ENST00000617432 PROCP04070 461 aa9.07□□□□□ -0.96
CUL3-216ENST00000617432 BEND7Q8N7W2 519 aaPredicted RBP9.07□□□□□ -0.96
CUL3-216ENST00000617432 GALNT6Q8NCL4 622 aa9.07□□□□□ -0.96
CUL3-216ENST00000617432 SHROOM4Q9ULL8 1493 aa9.07□□□□□ -0.96
CUL3-216ENST00000617432 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
CUL3-216ENST00000617432 CBLBQ13191 982 aa9.06□□□□□ -0.96
CUL3-216ENST00000617432 PSMG3-AS1Q96PY0 264 aa9.06□□□□□ -0.96
CUL3-216ENST00000617432 CNTNAP5Q8WYK1 1306 aa9.06□□□□□ -0.96
CUL3-216ENST00000617432 CC2D2AQ9P2K1 1620 aa9.06□□□□□ -0.96
CUL3-216ENST00000617432 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
CUL3-216ENST00000617432 PPP1R26Q5T8A7 1209 aaPredicted RBP9.05□□□□□ -0.96
CUL3-216ENST00000617432 RSBN1LQ6PCB5 846 aaPredicted RBP9.05□□□□□ -0.96
CUL3-216ENST00000617432 EIF4G1Q04637 1599 aaKnown RBP9.05□□□□□ -0.96
CUL3-216ENST00000617432 DIXDC1Q155Q3 683 aa9.05□□□□□ -0.96
CUL3-216ENST00000617432 NBPF14Q5TI25 921 aa9.05□□□□□ -0.96
CUL3-216ENST00000617432 ZBTB3Q9H5J0 574 aa9.05□□□□□ -0.96
CUL3-216ENST00000617432 HRCP23327 699 aa9.04□□□□□ -0.96
CUL3-216ENST00000617432 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
CUL3-216ENST00000617432 PODNQ7Z5L7 613 aa9.04□□□□□ -0.96
CUL3-216ENST00000617432 PCDHB15Q9Y5E8 787 aa9.04□□□□□ -0.96
CUL3-216ENST00000617432 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.03□□□□□ -0.96
CUL3-216ENST00000617432 CTSOP43234 321 aaPredicted RBP9.03□□□□□ -0.96
CUL3-216ENST00000617432 Q8N3U1 123 aa9.03□□□□□ -0.96
CUL3-216ENST00000617432 KRTAP9-2Q9BYQ4 174 aa9.03□□□□□ -0.96
CUL3-216ENST00000617432 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.97
CUL3-216ENST00000617432 GAS6Q14393 721 aa9.02□□□□□ -0.97
CUL3-216ENST00000617432 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
CUL3-216ENST00000617432 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
CUL3-216ENST00000617432 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
CUL3-216ENST00000617432 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
CUL3-216ENST00000617432 INSM2Q96T92 566 aaPredicted RBP9□□□□□ -0.97
CUL3-216ENST00000617432 BEGAINQ9BUH8 593 aa9□□□□□ -0.97
CUL3-216ENST00000617432 RNF217Q8TC41 542 aa8.99□□□□□ -0.97
CUL3-216ENST00000617432 POLMQ9NP87 494 aaPredicted RBP8.99□□□□□ -0.97
CUL3-216ENST00000617432 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
CUL3-216ENST00000617432 DHX9Q08211 1270 aaKnown RBP8.98□□□□□ -0.97
CUL3-216ENST00000617432 NEDD1Q8NHV4 660 aa8.98□□□□□ -0.97
CUL3-216ENST00000617432 GPKOWQ92917 476 aaPredicted RBP eCLIP8.98□□□□□ -0.975e-7■■□□□ 13
CUL3-216ENST00000617432 AGBL1Q96MI9 1066 aa8.98□□□□□ -0.97
CUL3-216ENST00000617432 KRTAP9-6A0A140TA67 174 aa8.97□□□□□ -0.97
CUL3-216ENST00000617432 BCRP11274 1271 aa8.97□□□□□ -0.97
CUL3-216ENST00000617432 RELBQ01201 579 aa8.97□□□□□ -0.97
CUL3-216ENST00000617432 TTLL12Q14166 644 aaPredicted RBP8.97□□□□□ -0.97
CUL3-216ENST00000617432 MBIPQ9NS73 344 aa8.97□□□□□ -0.97
CUL3-216ENST00000617432 BAG6P46379 1132 aa8.97□□□□□ -0.97
CUL3-216ENST00000617432 ERFEQ4G0M1 354 aa8.97□□□□□ -0.97
CUL3-216ENST00000617432 CDV3Q9UKY7 258 aaKnown RBP8.97□□□□□ -0.97
CUL3-216ENST00000617432 GMCL1Q96IK5 515 aa8.96□□□□□ -0.98
CUL3-216ENST00000617432 CARD14Q9BXL6 1004 aa8.96□□□□□ -0.98
CUL3-216ENST00000617432 GIGYF2Q6Y7W6 1299 aaKnown RBP8.95□□□□□ -0.98
CUL3-216ENST00000617432 CABLES1Q8TDN4 633 aa8.95□□□□□ -0.98
CUL3-216ENST00000617432 KCTD15Q96SI1 283 aaPredicted RBP8.95□□□□□ -0.98
CUL3-216ENST00000617432 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
CUL3-216ENST00000617432 CUEDC1Q9NWM3 386 aaPredicted RBP8.95□□□□□ -0.98
CUL3-216ENST00000617432 IGF1RP08069 1367 aa8.94□□□□□ -0.98
CUL3-216ENST00000617432 AMHR2Q16671 573 aa8.94□□□□□ -0.98
CUL3-216ENST00000617432 RIC3Q7Z5B4 369 aa8.94□□□□□ -0.98
CUL3-216ENST00000617432 FOXR1Q6PIV2 292 aa8.93□□□□□ -0.98
CUL3-216ENST00000617432 TSC1Q92574 1164 aa8.93□□□□□ -0.98
CUL3-216ENST00000617432 ZNF395Q9H8N7 513 aaPredicted RBP8.92□□□□□ -0.98
CUL3-216ENST00000617432 LYSMD3Q7Z3D4 306 aa8.9□□□□□ -0.98
CUL3-216ENST00000617432 ALYREFQ86V81 257 aaKnown RBP8.9□□□□□ -0.98
CUL3-216ENST00000617432 TRIM22Q8IYM9 498 aa8.9□□□□□ -0.98
CUL3-216ENST00000617432 ACDQ96AP0 544 aa8.9□□□□□ -0.98
CUL3-216ENST00000617432 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
CUL3-216ENST00000617432 SLC10A4Q96EP9 437 aa8.9□□□□□ -0.98
CUL3-216ENST00000617432 FURINP09958 794 aa8.89□□□□□ -0.99
CUL3-216ENST00000617432 FOXD4L5Q5VV16 416 aaPredicted RBP8.89□□□□□ -0.99
CUL3-216ENST00000617432 KRBA1A5PL33 1030 aa8.88□□□□□ -0.99
CUL3-216ENST00000617432 NUTM2BA6NNL0 878 aaPredicted RBP8.88□□□□□ -0.99
CUL3-216ENST00000617432 NUTM2EB1AL46 878 aaPredicted RBP8.88□□□□□ -0.99
CUL3-216ENST00000617432 CSPP1Q1MSJ5 1256 aa8.88□□□□□ -0.99
CUL3-216ENST00000617432 INTS6LQ5JSJ4 861 aaKnown RBP8.88□□□□□ -0.99
CUL3-216ENST00000617432 NUTM2DQ5VT03 806 aaPredicted RBP8.88□□□□□ -0.99
CUL3-216ENST00000617432 PDXDC2PQ6P474 469 aa8.88□□□□□ -0.99
CUL3-216ENST00000617432 NUTM2AQ8IVF1 878 aaPredicted RBP8.88□□□□□ -0.99
CUL3-216ENST00000617432 ARHGAP9Q9BRR9 750 aa8.88□□□□□ -0.99
CUL3-216ENST00000617432 HELBQ8NG08 1087 aaPredicted RBP8.88□□□□□ -0.99
CUL3-216ENST00000617432 ADH1AP07327 375 aa8.87□□□□□ -0.99
CUL3-216ENST00000617432 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
CUL3-216ENST00000617432 KRTAP1-3Q8IUG1 177 aa8.87□□□□□ -0.99
CUL3-216ENST00000617432 GPR25O00155 361 aa8.86□□□□□ -0.99
CUL3-216ENST00000617432 PTGIRP43119 386 aa8.86□□□□□ -0.99
CUL3-216ENST00000617432 OIP5O43482 229 aa8.85□□□□□ -0.99
CUL3-216ENST00000617432 LILRB3O75022 631 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms