RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 ITGB5P18084 799 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 MT3P25713 68 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 ZFP36P26651 326 aaKnown RBP-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 TIE1P35590 1138 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 KRT2P35908 639 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 GATA4P43694 442 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 KRTAP12-2P59991 146 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 KRT76Q01546 638 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 FHL3Q13643 280 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 KLHL22Q53GT1 634 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 ZNF648Q5T619 568 aaPredicted RBP-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 ERICH6BQ5W0A0 696 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 POTEEQ6S8J3 1075 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 USP43Q70EL4 1123 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 ZNF598Q86UK7 904 aaKnown RBP-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 CD163Q86VB7 1156 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 ZNF710Q8N1W2 664 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 SPDYE1Q8NFV5 336 aaPredicted RBP-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 WHAMMQ8TF30 809 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 NELL1Q92832 810 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 COL26A1Q96A83 441 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 MS4A3Q96HJ5 214 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 BBC3Q96PG8 261 aaPredicted RBP-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 CD248Q9HCU0 757 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 HRH3Q9Y5N1 445 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 FAT1Q14517 4588 aa-0.38□□□□□ -2.47
SOX2-OT-236ENST00000616401 TP53BP1Q12888 1972 aaPredicted RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 KIAA1324LA8MWY0 1029 aaPredicted RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 MATN3O15232 486 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 KCNAB3O43448 404 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 CELA3BP08861 270 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 PRG2P13727 222 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 TNFRSF1BP20333 461 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 RFX1P22670 979 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 GRNP28799 593 aaKnown RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 VEGFBP49765 207 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 NANOS3P60323 173 aaKnown RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 MAP3K10Q02779 954 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 NFIXQ14938 502 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 ECM1Q16610 540 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 SPRED3Q2MJR0 410 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 LCE3EQ5T5B0 92 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 MSL1Q68DK7 614 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 DLK2Q6UY11 383 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 SH2D6Q7Z4S9 175 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 SLC51AQ86UW1 340 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 NAA40Q86UY6 237 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 KSR1Q8IVT5 923 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 LRRC56Q8IYG6 542 aaPredicted RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 TRIM52Q96A61 297 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 PHF12Q96QT6 1004 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 SLC38A3Q99624 504 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 SCAND2PQ9GZW5 306 aaPredicted RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 PCED1AQ9H1Q7 454 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 SEMA6CQ9H3T2 930 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 CAAP1Q9H8G2 361 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 WFDC1Q9HC57 220 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 EIF4ENIF1Q9NRA8 985 aaKnown RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 BMP2KQ9NSY1 1161 aaPredicted RBP-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 LRRC4BQ9NT99 713 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 RTEL1Q9NZ71 1219 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 DKK2Q9UBU2 259 aa-0.39□□□□□ -2.47
SOX2-OT-236ENST00000616401 USH2AO75445 5202 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 HYDINQ4G0P3 5121 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 UBR4Q5T4S7 5183 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 A0A0G2JLL6 359 aaPredicted RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 C1QTNF3-AMACRE9PGA6 284 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 PRR23D1E9PI22 279 aaPredicted RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 PPFIA2O75334 1257 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 ARL14EPLP0DKL9 152 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 PRR23D2P0DMB1 279 aaPredicted RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 COL8A1P27658 744 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 CHRNA4P43681 627 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 CEBPAP49715 358 aaPredicted RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 TRA2AQ13595 282 aaKnown RBP eCLIP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 SF3B4Q15427 424 aaKnown RBP eCLIP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 CCDC142Q17RM4 750 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 PLEKHN1Q494U1 663 aaPredicted RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 ATXN7L2Q5T6C5 722 aaPredicted RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 SPRYD7Q5W111 196 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 DPY19L2P1Q6NXN4 242 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 GSG1LQ6UXU4 331 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 ZNF414Q96IQ9 312 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 EHMT2Q96KQ7 1210 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 STAC3Q96MF2 364 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 CNTNAP3BQ96NU0 1288 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 ZSCAN10Q96SZ4 725 aaPredicted RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 GPR20Q99678 358 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 CNTNAP3Q9BZ76 1288 aa-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 CNOT11Q9UKZ1 510 aaKnown RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 FN1P02751 2386 aaKnown RBP-0.4□□□□□ -2.47
SOX2-OT-236ENST00000616401 FRAS1Q86XX4 4008 aa-0.41□□□□□ -2.47
SOX2-OT-236ENST00000616401 RYR1P21817 5038 aa-0.41□□□□□ -2.47
SOX2-OT-236ENST00000616401 ABCA4P78363 2273 aa-0.41□□□□□ -2.47
SOX2-OT-236ENST00000616401 ZNF316A6NFI3 1004 aaPredicted RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 ARHGAP33O14559 1287 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 TBC1D4O60343 1298 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 PAK3O75914 559 aaPredicted RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 TSPAN15O95858 294 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms