RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 COL5A2P05997 1499 aaPredicted RBP35.02■■■■□ 3.2
SURF1-205ENST00000615505 NSD3Q9BZ95 1437 aa35.01■■■■□ 3.2
SURF1-205ENST00000615505 GGNBP2Q9H3C7 697 aa35.01■■■■□ 3.2
SURF1-205ENST00000615505 AXIN2Q9Y2T1 843 aa35.01■■■■□ 3.2
SURF1-205ENST00000615505 USP35Q9P2H5 1018 aa34.99■■■■□ 3.19
SURF1-205ENST00000615505 COL18A1P39060 1754 aa34.99■■■■□ 3.19
SURF1-205ENST00000615505 ABCC6O95255 1503 aa34.96■■■■□ 3.19
SURF1-205ENST00000615505 TCP11L2Q8N4U5 519 aa34.95■■■■□ 3.19
SURF1-205ENST00000615505 PANK3Q9H999 370 aa34.95■■■■□ 3.19
SURF1-205ENST00000615505 CGNL1Q0VF96 1302 aa34.95■■■■□ 3.19
SURF1-205ENST00000615505 TOM1L2Q6ZVM7 507 aa34.94■■■■□ 3.18
SURF1-205ENST00000615505 UPF1Q92900 1129 aaKnown RBP eCLIP34.94■■■■□ 3.18
SURF1-205ENST00000615505 THRAP3Q9Y2W1 955 aaKnown RBP34.94■■■■□ 3.18
SURF1-205ENST00000615505 KIF7Q2M1P5 1343 aa34.94■■■■□ 3.18
SURF1-205ENST00000615505 CRB1P82279 1406 aa34.94■■■■□ 3.18
SURF1-205ENST00000615505 WDR17Q8IZU2 1322 aa34.93■■■■□ 3.18
SURF1-205ENST00000615505 CSB-PGBD3P0DP91 1061 aa34.93■■■■□ 3.18
SURF1-205ENST00000615505 BARGINQ6ZT62 677 aa34.93■■■■□ 3.18
SURF1-205ENST00000615505 KIF20BQ96Q89 1820 aa34.91■■■■□ 3.18
SURF1-205ENST00000615505 KRT27Q7Z3Y8 459 aa34.9■■■■□ 3.18
SURF1-205ENST00000615505 LTN1O94822 1766 aa34.9■■■■□ 3.18
SURF1-205ENST00000615505 IP6K1Q92551 441 aa34.87■■■■□ 3.17
SURF1-205ENST00000615505 RGPD5Q99666 1765 aa34.87■■■■□ 3.17
SURF1-205ENST00000615505 MAP3K19Q56UN5 1328 aa34.86■■■■□ 3.17
SURF1-205ENST00000615505 BRWD3Q6RI45 1802 aa34.86■■■■□ 3.17
SURF1-205ENST00000615505 FBLN1P23142 703 aa34.86■■■■□ 3.17
SURF1-205ENST00000615505 AMPHP49418 695 aa34.85■■■■□ 3.17
SURF1-205ENST00000615505 THSD7AQ9UPZ6 1657 aa34.85■■■■□ 3.17
SURF1-205ENST00000615505 ERBB3P21860 1342 aa34.83■■■■□ 3.17
SURF1-205ENST00000615505 BLMP54132 1417 aaPredicted RBP34.83■■■■□ 3.17
SURF1-205ENST00000615505 CARD10Q9BWT7 1032 aa34.83■■■■□ 3.17
SURF1-205ENST00000615505 ANKRD24Q8TF21 1146 aa34.82■■■■□ 3.16
SURF1-205ENST00000615505 RRS1Q15050 365 aaKnown RBP34.81■■■■□ 3.16
SURF1-205ENST00000615505 HOXC9P31274 260 aa34.8■■■■□ 3.16
SURF1-205ENST00000615505 KNSTRNQ9Y448 316 aa34.8■■■■□ 3.16
SURF1-205ENST00000615505 CCDC7Q96M83 1385 aa34.79■■■■□ 3.16
SURF1-205ENST00000615505 NLRP2Q9NX02 1062 aa34.78■■■■□ 3.16
SURF1-205ENST00000615505 RTL1A6NKG5 1358 aa34.77■■■■□ 3.16
SURF1-205ENST00000615505 PDE3BQ13370 1112 aa34.77■■■■□ 3.16
SURF1-205ENST00000615505 CCDC125Q86Z20 511 aa34.76■■■■□ 3.16
SURF1-205ENST00000615505 CDCA7Q9BWT1 371 aaPredicted RBP34.76■■■■□ 3.16
SURF1-205ENST00000615505 WASHC2AQ641Q2 1341 aa34.76■■■■□ 3.15
SURF1-205ENST00000615505 LTV1Q96GA3 475 aaPredicted RBP34.75■■■■□ 3.15
SURF1-205ENST00000615505 NSD2O96028 1365 aa34.74■■■■□ 3.15
SURF1-205ENST00000615505 KIF24Q5T7B8 1368 aa34.73■■■■□ 3.15
SURF1-205ENST00000615505 DDB1Q16531 1140 aa34.69■■■■□ 3.14
SURF1-205ENST00000615505 FAM182BQ5T319 152 aa34.69■■■■□ 3.14
SURF1-205ENST00000615505 FLT4P35916 1363 aa34.69■■■■□ 3.14
SURF1-205ENST00000615505 PARP4Q9UKK3 1724 aaKnown RBP34.68■■■■□ 3.14
SURF1-205ENST00000615505 ANKRD26Q9UPS8 1709 aa34.67■■■■□ 3.14
SURF1-205ENST00000615505 EMILIN1Q9Y6C2 1016 aa34.67■■■■□ 3.14
SURF1-205ENST00000615505 TNNT2P45379 298 aaPredicted RBP34.66■■■■□ 3.14
SURF1-205ENST00000615505 FAM196AQ6ZSG2 479 aa34.66■■■■□ 3.14
SURF1-205ENST00000615505 MORC1Q86VD1 984 aa34.66■■■■□ 3.14
SURF1-205ENST00000615505 INSRP06213 1382 aa34.65■■■■□ 3.14
SURF1-205ENST00000615505 PPM1GO15355 546 aaPredicted RBP34.65■■■■□ 3.14
SURF1-205ENST00000615505 SF3B2Q13435 895 aaKnown RBP34.65■■■■□ 3.14
SURF1-205ENST00000615505 HSP90AB2PQ58FF8 381 aa34.65■■■■□ 3.14
SURF1-205ENST00000615505 SMG6Q86US8 1419 aaKnown RBP34.64■■■■□ 3.14
SURF1-205ENST00000615505 EP400Q96L91 3159 aa34.64■■■■□ 3.14
SURF1-205ENST00000615505 DISP2A7MBM2 1401 aa34.64■■■■□ 3.14
SURF1-205ENST00000615505 FAM208AQ9UK61 1670 aaKnown RBP34.63■■■■□ 3.13
SURF1-205ENST00000615505 PER1O15534 1290 aaPredicted RBP34.63■■■■□ 3.13
SURF1-205ENST00000615505 EXOC5O00471 708 aa34.62■■■■□ 3.13
SURF1-205ENST00000615505 IL2RBP14784 551 aa34.62■■■■□ 3.13
SURF1-205ENST00000615505 AMER1Q5JTC6 1135 aaPredicted RBP34.62■■■■□ 3.13
SURF1-205ENST00000615505 POLKQ9UBT6 870 aa34.62■■■■□ 3.13
SURF1-205ENST00000615505 WNK3Q9BYP7 1800 aa34.62■■■■□ 3.13
SURF1-205ENST00000615505 ZEB1P37275 1124 aaPredicted RBP34.61■■■■□ 3.13
SURF1-205ENST00000615505 PEAK1Q9H792 1746 aa34.61■■■■□ 3.13
SURF1-205ENST00000615505 MAP2P11137 1827 aaKnown RBP34.59■■■■□ 3.13
SURF1-205ENST00000615505 LRRC37A3O60309 1634 aa34.59■■■■□ 3.13
SURF1-205ENST00000615505 NBPF6Q5VWK0 638 aa34.55■■■■□ 3.12
SURF1-205ENST00000615505 NBPF4Q96M43 638 aa34.55■■■■□ 3.12
SURF1-205ENST00000615505 OVOS2A0A0G2JMS6 1433 aa34.53■■■■□ 3.12
SURF1-205ENST00000615505 MARCH10Q8NA82 808 aaPredicted RBP34.52■■■■□ 3.12
SURF1-205ENST00000615505 TRIM37O94972 964 aa34.51■■■■□ 3.12
SURF1-205ENST00000615505 CC2D1BQ5T0F9 858 aaKnown RBP34.51■■■■□ 3.12
SURF1-205ENST00000615505 TNS2Q63HR2 1409 aa34.51■■■■□ 3.12
SURF1-205ENST00000615505 BAG6P46379 1132 aa34.49■■■■□ 3.11
SURF1-205ENST00000615505 RGPD2P0DJD1 1756 aa34.49■■■■□ 3.11
SURF1-205ENST00000615505 NPC1L1Q9UHC9 1359 aa34.49■■■■□ 3.11
SURF1-205ENST00000615505 USHBP1Q8N6Y0 703 aa34.48■■■■□ 3.11
SURF1-205ENST00000615505 RGPD1P0DJD0 1748 aa34.47■■■■□ 3.11
SURF1-205ENST00000615505 DEFB132Q7Z7B7 95 aa34.47■■■■□ 3.11
SURF1-205ENST00000615505 RAPGEF4Q8WZA2 1011 aa34.46■■■■□ 3.11
SURF1-205ENST00000615505 BCL9O00512 1426 aa34.43■■■■□ 3.1
SURF1-205ENST00000615505 CNGB1Q14028 1251 aaPredicted RBP34.42■■■■□ 3.1
SURF1-205ENST00000615505 EIF4A2Q14240 407 aaKnown RBP34.42■■■■□ 3.1
SURF1-205ENST00000615505 TATP17735 454 aaPredicted RBP34.41■■■■□ 3.1
SURF1-205ENST00000615505 ZCRB1Q8TBF4 217 aaKnown RBP34.41■■■■□ 3.1
SURF1-205ENST00000615505 EYA1Q99502 592 aa34.41■■■■□ 3.1
SURF1-205ENST00000615505 APBA3O96018 575 aa34.4■■■■□ 3.1
SURF1-205ENST00000615505 DDX54Q8TDD1 881 aaKnown RBP34.39■■■■□ 3.1
SURF1-205ENST00000615505 MEGF6O75095 1541 aa34.39■■■■□ 3.1
SURF1-205ENST00000615505 EN1Q05925 392 aaPredicted RBP34.37■■■■□ 3.09
SURF1-205ENST00000615505 TNS1Q9HBL0 1735 aaKnown RBP34.36■■■■□ 3.09
SURF1-205ENST00000615505 MTHFSP49914 203 aa34.36■■■■□ 3.09
SURF1-205ENST00000615505 BCL11BQ9C0K0 894 aaPredicted RBP34.36■■■■□ 3.09
SURF1-205ENST00000615505 NCAPD2Q15021 1401 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms