RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-223	ENST00000615442	RALBP1	Q15311	655 aa		14.24	□□□□□ -0.13
PVT1-223	ENST00000615442	RGS17	Q9UGC6	210 aa	Predicted RBP	14.24	□□□□□ -0.13
PVT1-223	ENST00000615442	TRPC5	Q9UL62	973 aa	Predicted RBP	14.24	□□□□□ -0.13
PVT1-223	ENST00000615442	ANKRD26	Q9UPS8	1709 aa		14.24	□□□□□ -0.13
PVT1-223	ENST00000615442	VPS72	Q15906	364 aa		14.23	□□□□□ -0.13
PVT1-223	ENST00000615442	QTRT2	Q9H974	415 aa	Known RBP	14.23	□□□□□ -0.13
PVT1-223	ENST00000615442	EMILIN1	Q9Y6C2	1016 aa		14.23	□□□□□ -0.13
PVT1-223	ENST00000615442	CAMTA1	Q9Y6Y1	1673 aa		14.23	□□□□□ -0.13
PVT1-223	ENST00000615442	BLM	P54132	1417 aa	Predicted RBP	14.23	□□□□□ -0.13
PVT1-223	ENST00000615442	FLT4	P35916	1363 aa		14.22	□□□□□ -0.13
PVT1-223	ENST00000615442	PPM1G	O15355	546 aa	Predicted RBP	14.22	□□□□□ -0.13
PVT1-223	ENST00000615442	INSR	P06213	1382 aa		14.22	□□□□□ -0.13
PVT1-223	ENST00000615442	PARD3	Q8TEW0	1356 aa		14.22	□□□□□ -0.13
PVT1-223	ENST00000615442	LMO7	Q8WWI1	1683 aa		14.21	□□□□□ -0.13
PVT1-223	ENST00000615442	MTHFS	P49914	203 aa		14.21	□□□□□ -0.13
PVT1-223	ENST00000615442	HSP90AB2P	Q58FF8	381 aa		14.21	□□□□□ -0.13
PVT1-223	ENST00000615442	STRN4	Q9NRL3	753 aa		14.21	□□□□□ -0.13
PVT1-223	ENST00000615442	SMG6	Q86US8	1419 aa	Known RBP	14.21	□□□□□ -0.13
PVT1-223	ENST00000615442	WDR17	Q8IZU2	1322 aa		14.2	□□□□□ -0.14
PVT1-223	ENST00000615442	COL5A2	P05997	1499 aa	Predicted RBP	14.2	□□□□□ -0.14
PVT1-223	ENST00000615442	COL18A1	P39060	1754 aa		14.2	□□□□□ -0.14
PVT1-223	ENST00000615442	PPP2R1A	P30153	589 aa		14.2	□□□□□ -0.14
PVT1-223	ENST00000615442	ANKRD24	Q8TF21	1146 aa		14.2	□□□□□ -0.14
PVT1-223	ENST00000615442	NWD2	Q9ULI1	1742 aa		14.2	□□□□□ -0.14
PVT1-223	ENST00000615442	ERBB3	P21860	1342 aa		14.19	□□□□□ -0.14
PVT1-223	ENST00000615442	ATRN	O75882	1429 aa		14.19	□□□□□ -0.14
PVT1-223	ENST00000615442	CSB-PGBD3	P0DP91	1061 aa		14.19	□□□□□ -0.14
PVT1-223	ENST00000615442	LARP1	Q6PKG0	1096 aa	Known RBP	14.19	□□□□□ -0.14
PVT1-223	ENST00000615442	GJD4	Q96KN9	370 aa	Predicted RBP	14.19	□□□□□ -0.14
PVT1-223	ENST00000615442	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.19	□□□□□ -0.14
PVT1-223	ENST00000615442	PLCH1	Q4KWH8	1693 aa		14.19	□□□□□ -0.14
PVT1-223	ENST00000615442	SPATA31A5	Q5VU36	1347 aa		14.18	□□□□□ -0.14
PVT1-223	ENST00000615442	SPATA31A7	Q8IWB4	1347 aa		14.18	□□□□□ -0.14
PVT1-223	ENST00000615442	RBM6	P78332	1123 aa	Known RBP	14.18	□□□□□ -0.14
PVT1-223	ENST00000615442	POTEA	Q6S8J7	498 aa		14.18	□□□□□ -0.14
PVT1-223	ENST00000615442	TOM1L2	Q6ZVM7	507 aa		14.18	□□□□□ -0.14
PVT1-223	ENST00000615442	CRB1	P82279	1406 aa		14.17	□□□□□ -0.14
PVT1-223	ENST00000615442	LTN1	O94822	1766 aa		14.17	□□□□□ -0.14
PVT1-223	ENST00000615442	RXRB	P28702	533 aa		14.17	□□□□□ -0.14
PVT1-223	ENST00000615442	LTV1	Q96GA3	475 aa	Predicted RBP	14.17	□□□□□ -0.14
PVT1-223	ENST00000615442	CARD10	Q9BWT7	1032 aa		14.17	□□□□□ -0.14
PVT1-223	ENST00000615442	THRAP3	Q9Y2W1	955 aa	Known RBP	14.17	□□□□□ -0.14
PVT1-223	ENST00000615442	CCDC9	Q9Y3X0	531 aa	Known RBP	14.17	□□□□□ -0.14
PVT1-223	ENST00000615442	SPATA31A1	Q5TZJ5	1347 aa		14.16	□□□□□ -0.14
PVT1-223	ENST00000615442	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	14.16	□□□□□ -0.14
PVT1-223	ENST00000615442	ANP32C	O43423	234 aa		14.16	□□□□□ -0.14
PVT1-223	ENST00000615442	CFAP53	Q96M91	514 aa		14.16	□□□□□ -0.14
PVT1-223	ENST00000615442	CDK12	Q9NYV4	1490 aa	Predicted RBP	14.16	□□□□□ -0.14
PVT1-223	ENST00000615442	MYBBP1A	Q9BQG0	1328 aa	Known RBP	14.15	□□□□□ -0.14
PVT1-223	ENST00000615442	NRAP	Q86VF7	1730 aa		14.15	□□□□□ -0.14
PVT1-223	ENST00000615442	PEAK1	Q9H792	1746 aa		14.15	□□□□□ -0.14
PVT1-223	ENST00000615442	ONECUT3	O60422	494 aa	Predicted RBP	14.15	□□□□□ -0.14
PVT1-223	ENST00000615442	TCP11L2	Q8N4U5	519 aa		14.15	□□□□□ -0.14
PVT1-223	ENST00000615442	NLRP2	Q9NX02	1062 aa		14.15	□□□□□ -0.14
PVT1-223	ENST00000615442	EIF4A2	Q14240	407 aa	Known RBP	14.14	□□□□□ -0.15
PVT1-223	ENST00000615442	BARGIN	Q6ZT62	677 aa		14.14	□□□□□ -0.15
PVT1-223	ENST00000615442	DIAPH1	O60610	1272 aa	Known RBP	14.13	□□□□□ -0.15
PVT1-223	ENST00000615442	IL13	P35225	146 aa		14.13	□□□□□ -0.15
PVT1-223	ENST00000615442	NBPF6	Q5VWK0	638 aa		14.13	□□□□□ -0.15
PVT1-223	ENST00000615442	NBPF4	Q96M43	638 aa		14.13	□□□□□ -0.15
PVT1-223	ENST00000615442	USP35	Q9P2H5	1018 aa		14.13	□□□□□ -0.15
PVT1-223	ENST00000615442	MAP2	P11137	1827 aa	Known RBP	14.13	□□□□□ -0.15
PVT1-223	ENST00000615442	CDCA7	Q9BWT1	371 aa	Predicted RBP	14.12	□□□□□ -0.15
PVT1-223	ENST00000615442	EYA1	Q99502	592 aa		14.11	□□□□□ -0.15
PVT1-223	ENST00000615442	FAM98C	Q17RN3	349 aa	Known RBP	14.1	□□□□□ -0.15
PVT1-223	ENST00000615442	NUDC	Q9Y266	331 aa		14.1	□□□□□ -0.15
PVT1-223	ENST00000615442	GLI3	P10071	1580 aa		14.09	□□□□□ -0.15
PVT1-223	ENST00000615442	RGPD5	Q99666	1765 aa		14.09	□□□□□ -0.15
PVT1-223	ENST00000615442	DIEXF	Q68CQ4	756 aa	Known RBP	14.09	□□□□□ -0.15
PVT1-223	ENST00000615442	IGSF1	Q8N6C5	1336 aa		14.09	□□□□□ -0.15
PVT1-223	ENST00000615442	COL3A1	P02461	1466 aa	Predicted RBP	14.08	□□□□□ -0.16
PVT1-223	ENST00000615442	IL2RB	P14784	551 aa		14.08	□□□□□ -0.16
PVT1-223	ENST00000615442	SEPT12	Q8IYM1	358 aa		14.08	□□□□□ -0.16
PVT1-223	ENST00000615442	FAM208A	Q9UK61	1670 aa	Known RBP	14.07	□□□□□ -0.16
PVT1-223	ENST00000615442	NCAPD2	Q15021	1401 aa		14.07	□□□□□ -0.16
PVT1-223	ENST00000615442	USHBP1	Q8N6Y0	703 aa		14.07	□□□□□ -0.16
PVT1-223	ENST00000615442	U2SURP	O15042	1029 aa	Known RBP	14.06	□□□□□ -0.16
PVT1-223	ENST00000615442	SULT6B1	Q6IMI4	303 aa		14.06	□□□□□ -0.16
PVT1-223	ENST00000615442	RAPGEF4	Q8WZA2	1011 aa		14.06	□□□□□ -0.16
PVT1-223	ENST00000615442	DISP2	A7MBM2	1401 aa		14.06	□□□□□ -0.16
PVT1-223	ENST00000615442		A0A0G2JS52	829 aa		14.05	□□□□□ -0.16
PVT1-223	ENST00000615442	EXOC5	O00471	708 aa		14.05	□□□□□ -0.16
PVT1-223	ENST00000615442	TAT	P17735	454 aa	Predicted RBP	14.05	□□□□□ -0.16
PVT1-223	ENST00000615442	MYT1	Q01538	1121 aa		14.05	□□□□□ -0.16
PVT1-223	ENST00000615442	DDB1	Q16531	1140 aa		14.04	□□□□□ -0.16
PVT1-223	ENST00000615442	KDR	P35968	1356 aa		14.04	□□□□□ -0.16
PVT1-223	ENST00000615442	PLEKHG2	Q9H7P9	1386 aa		14.04	□□□□□ -0.16
PVT1-223	ENST00000615442	U2AF1L5	P0DN76	240 aa	Predicted RBP	14.03	□□□□□ -0.16
PVT1-223	ENST00000615442	U2AF1	Q01081	240 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
PVT1-223	ENST00000615442	PDE3B	Q13370	1112 aa		14.03	□□□□□ -0.16
PVT1-223	ENST00000615442	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
PVT1-223	ENST00000615442	RGS12	O14924	1447 aa		14.03	□□□□□ -0.16
PVT1-223	ENST00000615442	FCHSD2	O94868	740 aa		14.02	□□□□□ -0.17
PVT1-223	ENST00000615442	HMOX1	P09601	288 aa		14.02	□□□□□ -0.17
PVT1-223	ENST00000615442	KRT27	Q7Z3Y8	459 aa		14.02	□□□□□ -0.17
PVT1-223	ENST00000615442	AEBP1	Q8IUX7	1158 aa		14.02	□□□□□ -0.17
PVT1-223	ENST00000615442	ZCRB1	Q8TBF4	217 aa	Known RBP	14.02	□□□□□ -0.17
PVT1-223	ENST00000615442	THSD7A	Q9UPZ6	1657 aa		14.01	□□□□□ -0.17
PVT1-223	ENST00000615442	OVOS2	A0A0G2JMS6	1433 aa		14.01	□□□□□ -0.17
PVT1-223	ENST00000615442	AMOT	Q4VCS5	1084 aa		14.01	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms