RNA–Protein interactions for RNA: ENST00000613346.4

PCDH15-225, Transcript of protocadherin related 15, humanhuman

TSL 4

Gene PCDH15, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-225ENST00000613346 IP6K1Q92551 441 aa18.39■□□□□ 0.53
PCDH15-225ENST00000613346 FBLN1P23142 703 aa18.37■□□□□ 0.53
PCDH15-225ENST00000613346 HOXC9P31274 260 aa18.37■□□□□ 0.53
PCDH15-225ENST00000613346 RBM6P78332 1123 aaKnown RBP18.37■□□□□ 0.53
PCDH15-225ENST00000613346 VPS72Q15906 364 aa18.37■□□□□ 0.53
PCDH15-225ENST00000613346 TOM1L2Q6ZVM7 507 aa18.37■□□□□ 0.53
PCDH15-225ENST00000613346 RTL1A6NKG5 1358 aa18.37■□□□□ 0.53
PCDH15-225ENST00000613346 BCL9LQ86UU0 1499 aa18.37■□□□□ 0.53
PCDH15-225ENST00000613346 A0A0G2JS52 829 aa18.36■□□□□ 0.53
PCDH15-225ENST00000613346 FLT4P35916 1363 aa18.36■□□□□ 0.53
PCDH15-225ENST00000613346 MYT1Q01538 1121 aa18.36■□□□□ 0.53
PCDH15-225ENST00000613346 PLCH1Q4KWH8 1693 aa18.36■□□□□ 0.53
PCDH15-225ENST00000613346 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
PCDH15-225ENST00000613346 SMG6Q86US8 1419 aaKnown RBP18.36■□□□□ 0.53
PCDH15-225ENST00000613346 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
PCDH15-225ENST00000613346 GJD4Q96KN9 370 aaPredicted RBP18.36■□□□□ 0.53
PCDH15-225ENST00000613346 RGS17Q9UGC6 210 aaPredicted RBP18.36■□□□□ 0.53
PCDH15-225ENST00000613346 NWD2Q9ULI1 1742 aa18.36■□□□□ 0.53
PCDH15-225ENST00000613346 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
PCDH15-225ENST00000613346 ABCC6O95255 1503 aa18.35■□□□□ 0.53
PCDH15-225ENST00000613346 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
PCDH15-225ENST00000613346 ANKRD24Q8TF21 1146 aa18.35■□□□□ 0.53
PCDH15-225ENST00000613346 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
PCDH15-225ENST00000613346 AXIN2Q9Y2T1 843 aa18.35■□□□□ 0.53
PCDH15-225ENST00000613346 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
PCDH15-225ENST00000613346 POTEAQ6S8J7 498 aa18.34■□□□□ 0.53
PCDH15-225ENST00000613346 NLRP2Q9NX02 1062 aa18.34■□□□□ 0.53
PCDH15-225ENST00000613346 POLKQ9UBT6 870 aa18.34■□□□□ 0.53
PCDH15-225ENST00000613346 ATRNO75882 1429 aa18.33■□□□□ 0.53
PCDH15-225ENST00000613346 WDR17Q8IZU2 1322 aa18.33■□□□□ 0.53
PCDH15-225ENST00000613346 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
PCDH15-225ENST00000613346 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
PCDH15-225ENST00000613346 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.52
PCDH15-225ENST00000613346 LTN1O94822 1766 aa18.32■□□□□ 0.52
PCDH15-225ENST00000613346 RALBP1Q15311 655 aa18.32■□□□□ 0.52
PCDH15-225ENST00000613346 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
PCDH15-225ENST00000613346 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
PCDH15-225ENST00000613346 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
PCDH15-225ENST00000613346 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
PCDH15-225ENST00000613346 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.31■□□□□ 0.52
PCDH15-225ENST00000613346 ERBB3P21860 1342 aa18.3■□□□□ 0.52
PCDH15-225ENST00000613346 HSP90AB2PQ58FF8 381 aa18.3■□□□□ 0.52
PCDH15-225ENST00000613346 THRAP3Q9Y2W1 955 aaKnown RBP18.3■□□□□ 0.52
PCDH15-225ENST00000613346 LMO7Q8WWI1 1683 aa18.3■□□□□ 0.52
PCDH15-225ENST00000613346 CRB1P82279 1406 aa18.3■□□□□ 0.52
PCDH15-225ENST00000613346 INSRP06213 1382 aa18.3■□□□□ 0.52
PCDH15-225ENST00000613346 SPATA31A1Q5TZJ5 1347 aa18.29■□□□□ 0.52
PCDH15-225ENST00000613346 MTHFSP49914 203 aa18.29■□□□□ 0.52
PCDH15-225ENST00000613346 CARD10Q9BWT7 1032 aa18.28■□□□□ 0.52
PCDH15-225ENST00000613346 ANP32CO43423 234 aa18.27■□□□□ 0.52
PCDH15-225ENST00000613346 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
PCDH15-225ENST00000613346 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
PCDH15-225ENST00000613346 COL18A1P39060 1754 aa18.27■□□□□ 0.51
PCDH15-225ENST00000613346 NRAPQ86VF7 1730 aa18.26■□□□□ 0.51
PCDH15-225ENST00000613346 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
PCDH15-225ENST00000613346 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
PCDH15-225ENST00000613346 BARGINQ6ZT62 677 aa18.25■□□□□ 0.51
PCDH15-225ENST00000613346 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
PCDH15-225ENST00000613346 CDK12Q9NYV4 1490 aaPredicted RBP18.24■□□□□ 0.51
PCDH15-225ENST00000613346 DIAPH1O60610 1272 aaKnown RBP18.23■□□□□ 0.51
PCDH15-225ENST00000613346 SEPT12Q8IYM1 358 aa18.23■□□□□ 0.51
PCDH15-225ENST00000613346 NUDCQ9Y266 331 aa18.23■□□□□ 0.51
PCDH15-225ENST00000613346 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
PCDH15-225ENST00000613346 EIF4A2Q14240 407 aaKnown RBP18.22■□□□□ 0.51
PCDH15-225ENST00000613346 RAPGEF4Q8WZA2 1011 aa18.22■□□□□ 0.51
PCDH15-225ENST00000613346 IL2RBP14784 551 aa18.21■□□□□ 0.51
PCDH15-225ENST00000613346 PDE3BQ13370 1112 aa18.21■□□□□ 0.51
PCDH15-225ENST00000613346 NBPF6Q5VWK0 638 aa18.21■□□□□ 0.51
PCDH15-225ENST00000613346 NBPF4Q96M43 638 aa18.21■□□□□ 0.51
PCDH15-225ENST00000613346 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
PCDH15-225ENST00000613346 ONECUT3O60422 494 aaPredicted RBP18.2■□□□□ 0.5
PCDH15-225ENST00000613346 PEAK1Q9H792 1746 aa18.2■□□□□ 0.5
PCDH15-225ENST00000613346 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
PCDH15-225ENST00000613346 EXOC5O00471 708 aa18.19■□□□□ 0.5
PCDH15-225ENST00000613346 GLI3P10071 1580 aa18.19■□□□□ 0.5
PCDH15-225ENST00000613346 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
PCDH15-225ENST00000613346 DDB1Q16531 1140 aa18.19■□□□□ 0.5
PCDH15-225ENST00000613346 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
PCDH15-225ENST00000613346 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
PCDH15-225ENST00000613346 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
PCDH15-225ENST00000613346 EYA1Q99502 592 aa18.18■□□□□ 0.5
PCDH15-225ENST00000613346 RGS12O14924 1447 aa18.17■□□□□ 0.5
PCDH15-225ENST00000613346 KRT27Q7Z3Y8 459 aa18.17■□□□□ 0.5
PCDH15-225ENST00000613346 IL13P35225 146 aa18.16■□□□□ 0.5
PCDH15-225ENST00000613346 NEFMP07197 916 aa18.13■□□□□ 0.49
PCDH15-225ENST00000613346 SULT6B1Q6IMI4 303 aa18.13■□□□□ 0.49
PCDH15-225ENST00000613346 IGSF1Q8N6C5 1336 aa18.13■□□□□ 0.49
PCDH15-225ENST00000613346 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
PCDH15-225ENST00000613346 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDH15-225ENST00000613346 ZCRB1Q8TBF4 217 aaKnown RBP18.12■□□□□ 0.49
PCDH15-225ENST00000613346 SPG7Q9UQ90 795 aa18.12■□□□□ 0.49
PCDH15-225ENST00000613346 HMOX1P09601 288 aa18.1■□□□□ 0.49
PCDH15-225ENST00000613346 WDR43Q15061 677 aaKnown RBP eCLIP18.1■□□□□ 0.49
PCDH15-225ENST00000613346 PLEKHO1Q53GL0 409 aaPredicted RBP18.1■□□□□ 0.49
PCDH15-225ENST00000613346 DDX54Q8TDD1 881 aaKnown RBP18.1■□□□□ 0.49
PCDH15-225ENST00000613346 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
PCDH15-225ENST00000613346 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
PCDH15-225ENST00000613346 DISP2A7MBM2 1401 aa18.08■□□□□ 0.49
PCDH15-225ENST00000613346 AMOTQ4VCS5 1084 aa18.08■□□□□ 0.48
PCDH15-225ENST00000613346 FAM196AQ6ZSG2 479 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms