RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 LTN1O94822 1766 aa17.28■□□□□ 0.36
PRKN-210ENST00000612540 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
PRKN-210ENST00000612540 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
PRKN-210ENST00000612540 GJD4Q96KN9 370 aaPredicted RBP17.28■□□□□ 0.36
PRKN-210ENST00000612540 MRS2Q9HD23 443 aa17.28■□□□□ 0.36
PRKN-210ENST00000612540 GLI3P10071 1580 aa17.28■□□□□ 0.36
PRKN-210ENST00000612540 NFAT5O94916 1531 aa17.27■□□□□ 0.36
PRKN-210ENST00000612540 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
PRKN-210ENST00000612540 RRS1Q15050 365 aaKnown RBP17.27■□□□□ 0.36
PRKN-210ENST00000612540 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
PRKN-210ENST00000612540 KCNH5Q8NCM2 988 aa17.27■□□□□ 0.36
PRKN-210ENST00000612540 NWD2Q9ULI1 1742 aa17.27■□□□□ 0.35
PRKN-210ENST00000612540 AATKQ6ZMQ8 1374 aa17.27■□□□□ 0.35
PRKN-210ENST00000612540 MTHFSP49914 203 aa17.26■□□□□ 0.35
PRKN-210ENST00000612540 GCP02774 474 aa17.25■□□□□ 0.35
PRKN-210ENST00000612540 CFAP53Q96M91 514 aa17.25■□□□□ 0.35
PRKN-210ENST00000612540 EMILIN1Q9Y6C2 1016 aa17.25■□□□□ 0.35
PRKN-210ENST00000612540 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
PRKN-210ENST00000612540 POLKQ9UBT6 870 aa17.24■□□□□ 0.35
PRKN-210ENST00000612540 SRCAPQ6ZRS2 3230 aa17.24■□□□□ 0.35
PRKN-210ENST00000612540 MAP3K19Q56UN5 1328 aa17.23■□□□□ 0.35
PRKN-210ENST00000612540 AMPHP49418 695 aa17.23■□□□□ 0.35
PRKN-210ENST00000612540 ZC3H6P61129 1189 aaKnown RBP17.23■□□□□ 0.35
PRKN-210ENST00000612540 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
PRKN-210ENST00000612540 SMG6Q86US8 1419 aaKnown RBP17.22■□□□□ 0.35
PRKN-210ENST00000612540 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
PRKN-210ENST00000612540 FLT4P35916 1363 aa17.2■□□□□ 0.34
PRKN-210ENST00000612540 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
PRKN-210ENST00000612540 VPS72Q15906 364 aa17.19■□□□□ 0.34
PRKN-210ENST00000612540 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
PRKN-210ENST00000612540 KIAA0232Q92628 1395 aa17.18■□□□□ 0.34
PRKN-210ENST00000612540 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
PRKN-210ENST00000612540 RGPD5Q99666 1765 aa17.17■□□□□ 0.34
PRKN-210ENST00000612540 ARHGEF25Q86VW2 580 aa17.17■□□□□ 0.34
PRKN-210ENST00000612540 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
PRKN-210ENST00000612540 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
PRKN-210ENST00000612540 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
PRKN-210ENST00000612540 ONECUT3O60422 494 aaPredicted RBP17.16■□□□□ 0.34
PRKN-210ENST00000612540 HOXC9P31274 260 aa17.16■□□□□ 0.34
PRKN-210ENST00000612540 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRKN-210ENST00000612540 CHRNA2Q15822 529 aa17.16■□□□□ 0.34
PRKN-210ENST00000612540 FAM9BQ8IZU0 186 aa17.16■□□□□ 0.34
PRKN-210ENST00000612540 CPDO75976 1380 aa17.15■□□□□ 0.34
PRKN-210ENST00000612540 DIAPH1O60610 1272 aaKnown RBP17.15■□□□□ 0.34
PRKN-210ENST00000612540 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
PRKN-210ENST00000612540 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
PRKN-210ENST00000612540 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
PRKN-210ENST00000612540 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
PRKN-210ENST00000612540 SEPT12Q8IYM1 358 aa17.14■□□□□ 0.33
PRKN-210ENST00000612540 IP6K1Q92551 441 aa17.14■□□□□ 0.33
PRKN-210ENST00000612540 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
PRKN-210ENST00000612540 COL18A1P39060 1754 aa17.14■□□□□ 0.33
PRKN-210ENST00000612540 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
PRKN-210ENST00000612540 ABCC6O95255 1503 aa17.13■□□□□ 0.33
PRKN-210ENST00000612540 INSRP06213 1382 aa17.13■□□□□ 0.33
PRKN-210ENST00000612540 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
PRKN-210ENST00000612540 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
PRKN-210ENST00000612540 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
PRKN-210ENST00000612540 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
PRKN-210ENST00000612540 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRKN-210ENST00000612540 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
PRKN-210ENST00000612540 LMO7Q8WWI1 1683 aa17.1■□□□□ 0.33
PRKN-210ENST00000612540 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
PRKN-210ENST00000612540 CSB-PGBD3P0DP91 1061 aa17.09■□□□□ 0.33
PRKN-210ENST00000612540 IL13P35225 146 aa17.09■□□□□ 0.33
PRKN-210ENST00000612540 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
PRKN-210ENST00000612540 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
PRKN-210ENST00000612540 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
PRKN-210ENST00000612540 AXIN2Q9Y2T1 843 aa17.08■□□□□ 0.32
PRKN-210ENST00000612540 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
PRKN-210ENST00000612540 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
PRKN-210ENST00000612540 DEFB132Q7Z7B7 95 aa17.06■□□□□ 0.32
PRKN-210ENST00000612540 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
PRKN-210ENST00000612540 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
PRKN-210ENST00000612540 ERBB3P21860 1342 aa17.05■□□□□ 0.32
PRKN-210ENST00000612540 A0A0G2JS52 829 aa17.05■□□□□ 0.32
PRKN-210ENST00000612540 HMOX1P09601 288 aa17.05■□□□□ 0.32
PRKN-210ENST00000612540 MYT1Q01538 1121 aa17.05■□□□□ 0.32
PRKN-210ENST00000612540 FAM98CQ17RN3 349 aaKnown RBP17.05■□□□□ 0.32
PRKN-210ENST00000612540 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
PRKN-210ENST00000612540 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
PRKN-210ENST00000612540 SPATA31A5Q5VU36 1347 aa17.04■□□□□ 0.32
PRKN-210ENST00000612540 SPATA31A7Q8IWB4 1347 aa17.04■□□□□ 0.32
PRKN-210ENST00000612540 EVA1CP58658 441 aa17.04■□□□□ 0.32
PRKN-210ENST00000612540 NLRP2Q9NX02 1062 aa17.04■□□□□ 0.32
PRKN-210ENST00000612540 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
PRKN-210ENST00000612540 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
PRKN-210ENST00000612540 CCDC146Q8IYE0 955 aa17.03■□□□□ 0.32
PRKN-210ENST00000612540 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
PRKN-210ENST00000612540 EYA1Q99502 592 aa17.03■□□□□ 0.32
PRKN-210ENST00000612540 THSD7AQ9UPZ6 1657 aa17.03■□□□□ 0.32
PRKN-210ENST00000612540 IGSF1Q8N6C5 1336 aa17.02■□□□□ 0.32
PRKN-210ENST00000612540 SULT6B1Q6IMI4 303 aa17.02■□□□□ 0.32
PRKN-210ENST00000612540 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
PRKN-210ENST00000612540 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
PRKN-210ENST00000612540 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
PRKN-210ENST00000612540 NEFMP07197 916 aa17■□□□□ 0.31
PRKN-210ENST00000612540 PRKAR2BP31323 418 aa17■□□□□ 0.31
PRKN-210ENST00000612540 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
PRKN-210ENST00000612540 NBPF4Q96M43 638 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms