RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 HSPA1LP34931 641 aa29.51■■■□□ 2.31
UBE3C-209ENST00000611269 HSP90AB2PQ58FF8 381 aa29.51■■■□□ 2.31
UBE3C-209ENST00000611269 HOXC9P31274 260 aa29.51■■■□□ 2.31
UBE3C-209ENST00000611269 RTL1A6NKG5 1358 aa29.5■■■□□ 2.31
UBE3C-209ENST00000611269 DIAPH1O60610 1272 aaKnown RBP29.48■■■□□ 2.31
UBE3C-209ENST00000611269 KIAA0232Q92628 1395 aa29.48■■■□□ 2.31
UBE3C-209ENST00000611269 CPDO75976 1380 aa29.48■■■□□ 2.31
UBE3C-209ENST00000611269 IP6K1Q92551 441 aa29.47■■■□□ 2.31
UBE3C-209ENST00000611269 WDR43Q15061 677 aaKnown RBP eCLIP29.46■■■□□ 2.31
UBE3C-209ENST00000611269 BLMP54132 1417 aaPredicted RBP29.46■■■□□ 2.31
UBE3C-209ENST00000611269 JCADQ9P266 1359 aa29.46■■■□□ 2.31
UBE3C-209ENST00000611269 NUDCQ9Y266 331 aa29.45■■■□□ 2.31
UBE3C-209ENST00000611269 COL18A1P39060 1754 aa29.44■■■□□ 2.3
UBE3C-209ENST00000611269 IL13P35225 146 aa29.44■■■□□ 2.3
UBE3C-209ENST00000611269 RGPD5Q99666 1765 aa29.43■■■□□ 2.3
UBE3C-209ENST00000611269 EIF4A2Q14240 407 aaKnown RBP29.43■■■□□ 2.3
UBE3C-209ENST00000611269 CHRNA2Q15822 529 aa29.43■■■□□ 2.3
UBE3C-209ENST00000611269 PRDM11Q9NQV5 511 aa29.42■■■□□ 2.3
UBE3C-209ENST00000611269 ADAMTS8Q9UP79 889 aa29.42■■■□□ 2.3
UBE3C-209ENST00000611269 AXIN2Q9Y2T1 843 aa29.42■■■□□ 2.3
UBE3C-209ENST00000611269 U2SURPO15042 1029 aaKnown RBP29.41■■■□□ 2.3
UBE3C-209ENST00000611269 ERICH6BQ5W0A0 696 aa29.4■■■□□ 2.3
UBE3C-209ENST00000611269 ABCC6O95255 1503 aa29.39■■■□□ 2.3
UBE3C-209ENST00000611269 LTV1Q96GA3 475 aaPredicted RBP29.39■■■□□ 2.3
UBE3C-209ENST00000611269 NUTM2BA6NNL0 878 aaPredicted RBP29.38■■■□□ 2.29
UBE3C-209ENST00000611269 NUTM2EB1AL46 878 aaPredicted RBP29.38■■■□□ 2.29
UBE3C-209ENST00000611269 U2AF1L5P0DN76 240 aaPredicted RBP29.38■■■□□ 2.29
UBE3C-209ENST00000611269 U2AF1Q01081 240 aaKnown RBP eCLIP29.38■■■□□ 2.29
UBE3C-209ENST00000611269 PDE3BQ13370 1112 aa29.38■■■□□ 2.29
UBE3C-209ENST00000611269 NUTM2AQ8IVF1 878 aaPredicted RBP29.38■■■□□ 2.29
UBE3C-209ENST00000611269 LMO7Q8WWI1 1683 aa29.36■■■□□ 2.29
UBE3C-209ENST00000611269 FAM83GA6ND36 823 aa29.36■■■□□ 2.29
UBE3C-209ENST00000611269 RGPD1P0DJD0 1748 aa29.35■■■□□ 2.29
UBE3C-209ENST00000611269 PELP1Q8IZL8 1130 aaKnown RBP29.35■■■□□ 2.29
UBE3C-209ENST00000611269 ADAMTS2O95450 1211 aa29.34■■■□□ 2.29
UBE3C-209ENST00000611269 ANKRD24Q8TF21 1146 aa29.34■■■□□ 2.29
UBE3C-209ENST00000611269 CAMTA1Q9Y6Y1 1673 aa29.33■■■□□ 2.29
UBE3C-209ENST00000611269 COL14A1Q05707 1796 aaKnown RBP29.32■■■□□ 2.28
UBE3C-209ENST00000611269 SPATA31A6Q5VVP1 1343 aa29.32■■■□□ 2.28
UBE3C-209ENST00000611269 ERBB3P21860 1342 aa29.31■■■□□ 2.28
UBE3C-209ENST00000611269 RGPD2P0DJD1 1756 aa29.31■■■□□ 2.28
UBE3C-209ENST00000611269 SENP3-EIF4A1A0A087X0R7 540 aa29.3■■■□□ 2.28
UBE3C-209ENST00000611269 EYA1Q99502 592 aa29.3■■■□□ 2.28
UBE3C-209ENST00000611269 RNF123Q5XPI4 1314 aa29.29■■■□□ 2.28
UBE3C-209ENST00000611269 HMOX1P09601 288 aa29.29■■■□□ 2.28
UBE3C-209ENST00000611269 FBXO41Q8TF61 875 aa29.29■■■□□ 2.28
UBE3C-209ENST00000611269 CCDC146Q8IYE0 955 aa29.29■■■□□ 2.28
UBE3C-209ENST00000611269 IGSF1Q8N6C5 1336 aa29.28■■■□□ 2.28
UBE3C-209ENST00000611269 LRP6O75581 1613 aa29.27■■■□□ 2.28
UBE3C-209ENST00000611269 COL5A2P05997 1499 aaPredicted RBP29.27■■■□□ 2.28
UBE3C-209ENST00000611269 NBPF6Q5VWK0 638 aa29.26■■■□□ 2.27
UBE3C-209ENST00000611269 SULT6B1Q6IMI4 303 aa29.26■■■□□ 2.27
UBE3C-209ENST00000611269 AEBP1Q8IUX7 1158 aa29.26■■■□□ 2.27
UBE3C-209ENST00000611269 NBPF4Q96M43 638 aa29.26■■■□□ 2.27
UBE3C-209ENST00000611269 PLCH1Q4KWH8 1693 aa29.26■■■□□ 2.27
UBE3C-209ENST00000611269 RSPH6AQ9H0K4 717 aa29.25■■■□□ 2.27
UBE3C-209ENST00000611269 BTG4Q9NY30 223 aa29.25■■■□□ 2.27
UBE3C-209ENST00000611269 FCHSD2O94868 740 aa29.25■■■□□ 2.27
UBE3C-209ENST00000611269 CSB-PGBD3P0DP91 1061 aa29.24■■■□□ 2.27
UBE3C-209ENST00000611269 FAM208AQ9UK61 1670 aaKnown RBP29.24■■■□□ 2.27
UBE3C-209ENST00000611269 IRX6P78412 446 aaPredicted RBP29.23■■■□□ 2.27
UBE3C-209ENST00000611269 USHBP1Q8N6Y0 703 aa29.23■■■□□ 2.27
UBE3C-209ENST00000611269 PRKAR2BP31323 418 aa29.22■■■□□ 2.27
UBE3C-209ENST00000611269 KDRP35968 1356 aa29.22■■■□□ 2.27
UBE3C-209ENST00000611269 RUNDC1Q96C34 613 aa29.21■■■□□ 2.27
UBE3C-209ENST00000611269 PLEKHF1Q96S99 279 aa29.21■■■□□ 2.27
UBE3C-209ENST00000611269 STRN4Q9NRL3 753 aa29.21■■■□□ 2.27
UBE3C-209ENST00000611269 SALL2Q9Y467 1007 aaPredicted RBP29.21■■■□□ 2.27
UBE3C-209ENST00000611269 NLRP2Q9NX02 1062 aa29.21■■■□□ 2.27
UBE3C-209ENST00000611269 WDR17Q8IZU2 1322 aa29.2■■■□□ 2.27
UBE3C-209ENST00000611269 EVA1CP58658 441 aa29.2■■■□□ 2.26
UBE3C-209ENST00000611269 PNNQ9H307 717 aaKnown RBP29.19■■■□□ 2.26
UBE3C-209ENST00000611269 C8orf37Q96NL8 207 aa29.19■■■□□ 2.26
UBE3C-209ENST00000611269 NCAPD2Q15021 1401 aa29.17■■■□□ 2.26
UBE3C-209ENST00000611269 NRAPQ86VF7 1730 aa29.17■■■□□ 2.26
UBE3C-209ENST00000611269 NWD2Q9ULI1 1742 aa29.17■■■□□ 2.26
UBE3C-209ENST00000611269 LARP1Q6PKG0 1096 aaKnown RBP29.17■■■□□ 2.26
UBE3C-209ENST00000611269 SLIT2O94813 1529 aa29.16■■■□□ 2.26
UBE3C-209ENST00000611269 APAF1O14727 1248 aa29.16■■■□□ 2.26
UBE3C-209ENST00000611269 TOM1L2Q6ZVM7 507 aa29.16■■■□□ 2.26
UBE3C-209ENST00000611269 NGLY1Q96IV0 654 aa29.15■■■□□ 2.26
UBE3C-209ENST00000611269 PPP4R2Q9NY27 417 aa29.15■■■□□ 2.26
UBE3C-209ENST00000611269 MAPK8IP3Q9UPT6 1336 aa29.15■■■□□ 2.26
UBE3C-209ENST00000611269 PHACTR3Q96KR7 559 aa29.14■■■□□ 2.26
UBE3C-209ENST00000611269 MEX3CQ5U5Q3 659 aaKnown RBP29.14■■■□□ 2.26
UBE3C-209ENST00000611269 TCP11L2Q8N4U5 519 aa29.13■■■□□ 2.25
UBE3C-209ENST00000611269 CDCA7LQ96GN5 454 aa29.13■■■□□ 2.25
UBE3C-209ENST00000611269 NGEFQ8N5V2 710 aa29.12■■■□□ 2.25
UBE3C-209ENST00000611269 ZNF521Q96K83 1311 aa29.12■■■□□ 2.25
UBE3C-209ENST00000611269 NEFMP07197 916 aa29.12■■■□□ 2.25
UBE3C-209ENST00000611269 CRB1P82279 1406 aa29.11■■■□□ 2.25
UBE3C-209ENST00000611269 CARD10Q9BWT7 1032 aa29.1■■■□□ 2.25
UBE3C-209ENST00000611269 RRP7AQ9Y3A4 280 aaKnown RBP29.1■■■□□ 2.25
UBE3C-209ENST00000611269 RCAN3Q9UKA8 241 aa29.09■■■□□ 2.25
UBE3C-209ENST00000611269 FNBP4Q8N3X1 1017 aaPredicted RBP29.08■■■□□ 2.25
UBE3C-209ENST00000611269 BCL9LQ86UU0 1499 aa29.07■■■□□ 2.24
UBE3C-209ENST00000611269 NEUROD2Q15784 382 aa29.07■■■□□ 2.24
UBE3C-209ENST00000611269 USP35Q9P2H5 1018 aa29.07■■■□□ 2.24
UBE3C-209ENST00000611269 UNC5CLQ8IV45 518 aa29.06■■■□□ 2.24
UBE3C-209ENST00000611269 TMPOP42166 694 aaKnown RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms