RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 HOXC9P31274 260 aa16.27■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 TRPC5Q9UL62 973 aaPredicted RBP16.27■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 VPS72Q15906 364 aa16.26■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 CAMTA1Q9Y6Y1 1673 aa16.26■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 FLT4P35916 1363 aa16.26■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 ANKRD26Q9UPS8 1709 aa16.25■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 RALBP1Q15311 655 aa16.25■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 LMO7Q8WWI1 1683 aa16.24■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 INSRP06213 1382 aa16.24■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 COL5A2P05997 1499 aaPredicted RBP16.23■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 ATRNO75882 1429 aa16.23■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 HSP90AB2PQ58FF8 381 aa16.23■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 ANKRD24Q8TF21 1146 aa16.23■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 NWD2Q9ULI1 1742 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 ERBB3P21860 1342 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 WDR17Q8IZU2 1322 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 PLCH1Q4KWH8 1693 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 CSB-PGBD3P0DP91 1061 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 MTHFSP49914 203 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 LARP1Q6PKG0 1096 aaKnown RBP16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 POTEAQ6S8J7 498 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 COL18A1P39060 1754 aa16.22■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 GJD4Q96KN9 370 aaPredicted RBP16.21■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
PTCHD1-AS-202ENST00000608254 SPATA31A5Q5VU36 1347 aa16.2■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 SPATA31A7Q8IWB4 1347 aa16.2■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 RBM6P78332 1123 aaKnown RBP16.2■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 TOM1L2Q6ZVM7 507 aa16.2■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 LTV1Q96GA3 475 aaPredicted RBP16.2■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 CRB1P82279 1406 aa16.19■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 RXRBP28702 533 aa16.19■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 CARD10Q9BWT7 1032 aa16.19■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 LTN1O94822 1766 aa16.18■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 CDK12Q9NYV4 1490 aaPredicted RBP16.18■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 NRAPQ86VF7 1730 aa16.18■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.18■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 EIF4A2Q14240 407 aaKnown RBP16.17■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 TCP11L2Q8N4U5 519 aa16.17■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 CFAP53Q96M91 514 aa16.17■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 MYBBP1AQ9BQG0 1328 aaKnown RBP16.17■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 ANP32CO43423 234 aa16.16■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 ONECUT3O60422 494 aaPredicted RBP16.15■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 BARGINQ6ZT62 677 aa16.15■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 USP35Q9P2H5 1018 aa16.15■□□□□ 0.18
PTCHD1-AS-202ENST00000608254 DIAPH1O60610 1272 aaKnown RBP16.14■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 IL13P35225 146 aa16.14■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 NBPF6Q5VWK0 638 aa16.14■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 NBPF4Q96M43 638 aa16.14■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 FAM98CQ17RN3 349 aaKnown RBP16.13■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 EYA1Q99502 592 aa16.13■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 CDCA7Q9BWT1 371 aaPredicted RBP16.12■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 GLI3P10071 1580 aa16.12■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 SEPT12Q8IYM1 358 aa16.1■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 IL2RBP14784 551 aa16.09■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 USHBP1Q8N6Y0 703 aa16.09■□□□□ 0.17
PTCHD1-AS-202ENST00000608254 A0A0G2JS52 829 aa16.08■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 MYT1Q01538 1121 aa16.08■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 FAM208AQ9UK61 1670 aaKnown RBP16.08■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 RAPGEF4Q8WZA2 1011 aa16.07■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 DISP2A7MBM2 1401 aa16.07■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 RGS12O14924 1447 aa16.06■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 U2SURPO15042 1029 aaKnown RBP16.06■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 EXOC5O00471 708 aa16.05■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 DDB1Q16531 1140 aa16.05■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 SULT6B1Q6IMI4 303 aa16.05■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 KDRP35968 1356 aa16.04■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 PLEKHG2Q9H7P9 1386 aa16.03■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 PDE3BQ13370 1112 aa16.03■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 AEBP1Q8IUX7 1158 aa16.03■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 THSD7AQ9UPZ6 1657 aa16.02■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 HMOX1P09601 288 aa16.02■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 KRT27Q7Z3Y8 459 aa16.02■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.02■□□□□ 0.16
PTCHD1-AS-202ENST00000608254 MEGF6O75095 1541 aa16.02■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 OVOS2A0A0G2JMS6 1433 aa16.02■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 FCHSD2O94868 740 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms