RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
UBE3B-213ENST00000605142 UTRNP46939 3433 aa17.2■□□□□ 0.34
UBE3B-213ENST00000605142 BRD4O60885 1362 aaPredicted RBP17.2■□□□□ 0.34
UBE3B-213ENST00000605142 NLRP13Q86W25 1043 aa17.2■□□□□ 0.34
UBE3B-213ENST00000605142 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
UBE3B-213ENST00000605142 BCL9O00512 1426 aa17.19■□□□□ 0.34
UBE3B-213ENST00000605142 ZNF784Q8NCA9 323 aaPredicted RBP17.18■□□□□ 0.34
UBE3B-213ENST00000605142 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
UBE3B-213ENST00000605142 SBF2Q86WG5 1849 aa17.18■□□□□ 0.34
UBE3B-213ENST00000605142 CRB1P82279 1406 aa17.18■□□□□ 0.34
UBE3B-213ENST00000605142 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
UBE3B-213ENST00000605142 NLRP6P59044 892 aa17.16■□□□□ 0.34
UBE3B-213ENST00000605142 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
UBE3B-213ENST00000605142 CPSF1Q10570 1443 aaKnown RBP17.15■□□□□ 0.34
UBE3B-213ENST00000605142 PTGER2P43116 358 aa17.15■□□□□ 0.34
UBE3B-213ENST00000605142 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
UBE3B-213ENST00000605142 RGPD5Q99666 1765 aa17.15■□□□□ 0.34
UBE3B-213ENST00000605142 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
UBE3B-213ENST00000605142 DDB1Q16531 1140 aa17.14■□□□□ 0.33
UBE3B-213ENST00000605142 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
UBE3B-213ENST00000605142 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.33
UBE3B-213ENST00000605142 TTC21BQ7Z4L5 1316 aa17.14■□□□□ 0.33
UBE3B-213ENST00000605142 CHD4Q14839 1912 aa17.13■□□□□ 0.33
UBE3B-213ENST00000605142 PROM2Q8N271 834 aa17.13■□□□□ 0.33
UBE3B-213ENST00000605142 LRRC37A3O60309 1634 aa17.13■□□□□ 0.33
UBE3B-213ENST00000605142 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
UBE3B-213ENST00000605142 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
UBE3B-213ENST00000605142 WNK3Q9BYP7 1800 aa17.12■□□□□ 0.33
UBE3B-213ENST00000605142 NFAT5O94916 1531 aa17.11■□□□□ 0.33
UBE3B-213ENST00000605142 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
UBE3B-213ENST00000605142 SYT17Q9BSW7 474 aa17.11■□□□□ 0.33
UBE3B-213ENST00000605142 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
UBE3B-213ENST00000605142 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
UBE3B-213ENST00000605142 TIMELESSQ9UNS1 1208 aa17.1■□□□□ 0.33
UBE3B-213ENST00000605142 MYOM1P52179 1685 aa17.1■□□□□ 0.33
UBE3B-213ENST00000605142 ZBTB7AO95365 584 aa17.09■□□□□ 0.33
UBE3B-213ENST00000605142 C1QTNF8P60827 252 aa17.09■□□□□ 0.33
UBE3B-213ENST00000605142 PDGFDQ9GZP0 370 aaPredicted RBP17.09■□□□□ 0.33
UBE3B-213ENST00000605142 MTFR1LQ9H019 292 aa17.09■□□□□ 0.33
UBE3B-213ENST00000605142 USP54Q70EL1 1684 aa17.08■□□□□ 0.32
UBE3B-213ENST00000605142 MAP3K5Q99683 1374 aa17.08■□□□□ 0.32
UBE3B-213ENST00000605142 SLC15A2Q16348 729 aa17.08■□□□□ 0.32
UBE3B-213ENST00000605142 SGIP1Q9BQI5 828 aa17.08■□□□□ 0.32
UBE3B-213ENST00000605142 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
UBE3B-213ENST00000605142 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
UBE3B-213ENST00000605142 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
UBE3B-213ENST00000605142 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
UBE3B-213ENST00000605142 TXNRD1Q16881 649 aa17.07■□□□□ 0.32
UBE3B-213ENST00000605142 PTF1AQ7RTS3 328 aa17.07■□□□□ 0.32
UBE3B-213ENST00000605142 MARCH10Q8NA82 808 aaPredicted RBP17.07■□□□□ 0.32
UBE3B-213ENST00000605142 FHDC1Q9C0D6 1143 aaPredicted RBP17.07■□□□□ 0.32
UBE3B-213ENST00000605142 KTN1Q86UP2 1357 aaKnown RBP17.06■□□□□ 0.32
UBE3B-213ENST00000605142 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
UBE3B-213ENST00000605142 SOX12O15370 315 aa17.06■□□□□ 0.32
UBE3B-213ENST00000605142 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
UBE3B-213ENST00000605142 USP47Q96K76 1375 aa17.05■□□□□ 0.32
UBE3B-213ENST00000605142 ATF5Q9Y2D1 282 aaPredicted RBP17.05■□□□□ 0.32
UBE3B-213ENST00000605142 USP31Q70CQ4 1352 aa17.04■□□□□ 0.32
UBE3B-213ENST00000605142 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
UBE3B-213ENST00000605142 NME9Q86XW9 330 aa17.03■□□□□ 0.32
UBE3B-213ENST00000605142 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
UBE3B-213ENST00000605142 SLC24A1O60721 1099 aa17.02■□□□□ 0.32
UBE3B-213ENST00000605142 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.32
UBE3B-213ENST00000605142 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.32
UBE3B-213ENST00000605142 ABCC6O95255 1503 aa17.01■□□□□ 0.31
UBE3B-213ENST00000605142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
UBE3B-213ENST00000605142 LTN1O94822 1766 aa17.01■□□□□ 0.31
UBE3B-213ENST00000605142 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
UBE3B-213ENST00000605142 EXOC5O00471 708 aa17■□□□□ 0.31
UBE3B-213ENST00000605142 ARXQ96QS3 562 aa17■□□□□ 0.31
UBE3B-213ENST00000605142 TESK2Q96S53 571 aa17■□□□□ 0.31
UBE3B-213ENST00000605142 CEP350Q5VT06 3117 aa17■□□□□ 0.31
UBE3B-213ENST00000605142 A0A1W2PP64 1363 aa16.99■□□□□ 0.31
UBE3B-213ENST00000605142 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
UBE3B-213ENST00000605142 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
UBE3B-213ENST00000605142 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.31
UBE3B-213ENST00000605142 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
UBE3B-213ENST00000605142 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
UBE3B-213ENST00000605142 PUS7Q96PZ0 661 aaKnown RBP16.96■□□□□ 0.31
UBE3B-213ENST00000605142 NHSQ6T4R5 1651 aa16.96■□□□□ 0.31
UBE3B-213ENST00000605142 PAPPAQ13219 1627 aa16.96■□□□□ 0.3
UBE3B-213ENST00000605142 TNS2Q63HR2 1409 aa16.96■□□□□ 0.3
UBE3B-213ENST00000605142 ERBB3P21860 1342 aa16.96■□□□□ 0.3
UBE3B-213ENST00000605142 TMF1P82094 1093 aa16.95■□□□□ 0.3
UBE3B-213ENST00000605142 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-213ENST00000605142 GIGYF1O75420 1035 aaPredicted RBP16.94■□□□□ 0.3
UBE3B-213ENST00000605142 TERF2IPQ9NYB0 399 aa16.94■□□□□ 0.3
UBE3B-213ENST00000605142 GOLGB1Q14789 3259 aaKnown RBP16.93■□□□□ 0.3
UBE3B-213ENST00000605142 GPR162Q16538 588 aa16.92■□□□□ 0.3
UBE3B-213ENST00000605142 COL24A1Q17RW2 1714 aa16.92■□□□□ 0.3
UBE3B-213ENST00000605142 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
UBE3B-213ENST00000605142 QSER1Q2KHR3 1735 aa16.9■□□□□ 0.3
UBE3B-213ENST00000605142 FBLN1P23142 703 aa16.9■□□□□ 0.3
UBE3B-213ENST00000605142 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
UBE3B-213ENST00000605142 NLRP2Q9NX02 1062 aa16.89■□□□□ 0.29
UBE3B-213ENST00000605142 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
UBE3B-213ENST00000605142 RGPD2P0DJD1 1756 aa16.88■□□□□ 0.29
UBE3B-213ENST00000605142 POLD1P28340 1107 aa16.88■□□□□ 0.29
UBE3B-213ENST00000605142 SLC27A3Q5K4L6 730 aa16.88■□□□□ 0.29
UBE3B-213ENST00000605142 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms