RNA–Protein interactions for RNA: ENST00000601453.2

ATM-225, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-225ENST00000601453 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
ATM-225ENST00000601453 ARHGAP9Q9BRR9 750 aa9.78□□□□□ -0.84
ATM-225ENST00000601453 CDV3Q9UKY7 258 aaKnown RBP9.78□□□□□ -0.84
ATM-225ENST00000601453 ZC3H4Q9UPT8 1303 aaKnown RBP9.78□□□□□ -0.84
ATM-225ENST00000601453 SH3D19Q5HYK7 790 aa9.77□□□□□ -0.85
ATM-225ENST00000601453 PPP2R2DQ66LE6 453 aa9.77□□□□□ -0.85
ATM-225ENST00000601453 Q6ZVU0 165 aa9.77□□□□□ -0.85
ATM-225ENST00000601453 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATM-225ENST00000601453 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
ATM-225ENST00000601453 FBXO31Q5XUX0 539 aaPredicted RBP9.76□□□□□ -0.85
ATM-225ENST00000601453 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
ATM-225ENST00000601453 TTLL8A6PVC2 850 aa9.75□□□□□ -0.85
ATM-225ENST00000601453 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.75□□□□□ -0.857e-12■■■■□ 19.8
ATM-225ENST00000601453 KCTD15Q96SI1 283 aaPredicted RBP9.75□□□□□ -0.85
ATM-225ENST00000601453 NR6A1Q15406 480 aa9.74□□□□□ -0.85
ATM-225ENST00000601453 ZBTB33Q86T24 672 aa9.74□□□□□ -0.85
ATM-225ENST00000601453 PROCA1Q8NCQ7 364 aaPredicted RBP9.74□□□□□ -0.85
ATM-225ENST00000601453 DDRGK1Q96HY6 314 aa9.74□□□□□ -0.85
ATM-225ENST00000601453 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
ATM-225ENST00000601453 SPINT1O43278 529 aa9.73□□□□□ -0.85
ATM-225ENST00000601453 DHX9Q08211 1270 aaKnown RBP9.73□□□□□ -0.85
ATM-225ENST00000601453 CBLBQ13191 982 aa9.73□□□□□ -0.85
ATM-225ENST00000601453 GPSM3Q9Y4H4 160 aa9.73□□□□□ -0.85
ATM-225ENST00000601453 PTK2Q05397 1052 aa9.72□□□□□ -0.85
ATM-225ENST00000601453 OCSTAMPQ9BR26 566 aa9.72□□□□□ -0.85
ATM-225ENST00000601453 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
ATM-225ENST00000601453 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
ATM-225ENST00000601453 PTSQ03393 145 aa9.71□□□□□ -0.86
ATM-225ENST00000601453 INTS6LQ5JSJ4 861 aaKnown RBP9.71□□□□□ -0.86
ATM-225ENST00000601453 AP1G2O75843 785 aa9.69□□□□□ -0.86
ATM-225ENST00000601453 ADAM32Q8TC27 787 aa9.69□□□□□ -0.86
ATM-225ENST00000601453 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
ATM-225ENST00000601453 FIGNL2A6NMB9 653 aa9.68□□□□□ -0.86
ATM-225ENST00000601453 NANOS1Q8WY41 292 aaKnown RBP9.68□□□□□ -0.86
ATM-225ENST00000601453 GPR161Q8N6U8 529 aaKnown RBP9.67□□□□□ -0.86
ATM-225ENST00000601453 KRT76Q01546 638 aa9.66□□□□□ -0.86
ATM-225ENST00000601453 NBPF20Q3BBV1 942 aa9.66□□□□□ -0.86
ATM-225ENST00000601453 CCDC155Q8N6L0 562 aa9.66□□□□□ -0.86
ATM-225ENST00000601453 PNMA1Q8ND90 353 aa9.66□□□□□ -0.86
ATM-225ENST00000601453 EPS8L1Q8TE68 723 aa9.66□□□□□ -0.86
ATM-225ENST00000601453 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
ATM-225ENST00000601453 SLC35F4A4IF30 521 aa9.64□□□□□ -0.87
ATM-225ENST00000601453 CTSOP43234 321 aaPredicted RBP9.64□□□□□ -0.87
ATM-225ENST00000601453 RELBQ01201 579 aa9.64□□□□□ -0.87
ATM-225ENST00000601453 HMX1Q9NP08 348 aaPredicted RBP9.64□□□□□ -0.87
ATM-225ENST00000601453 USP17L8P0C7I0 530 aa9.63□□□□□ -0.87
ATM-225ENST00000601453 CNTNAP3BQ96NU0 1288 aa9.63□□□□□ -0.87
ATM-225ENST00000601453 INSM2Q96T92 566 aaPredicted RBP9.63□□□□□ -0.87
ATM-225ENST00000601453 CNTNAP3Q9BZ76 1288 aa9.63□□□□□ -0.87
ATM-225ENST00000601453 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
ATM-225ENST00000601453 COL25A1Q9BXS0 654 aaPredicted RBP9.62□□□□□ -0.87
ATM-225ENST00000601453 TMPRSS4Q9NRS4 437 aa9.62□□□□□ -0.87
ATM-225ENST00000601453 ITGA6P23229 1130 aa9.61□□□□□ -0.87
ATM-225ENST00000601453 KCNMA1Q12791 1236 aa9.61□□□□□ -0.87
ATM-225ENST00000601453 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
ATM-225ENST00000601453 ESPNB1AK53 854 aa9.6□□□□□ -0.87
ATM-225ENST00000601453 ADH1AP07327 375 aa9.6□□□□□ -0.87
ATM-225ENST00000601453 RFC5P40937 340 aa9.6□□□□□ -0.87
ATM-225ENST00000601453 RNF217Q8TC41 542 aa9.6□□□□□ -0.87
ATM-225ENST00000601453 ZNF395Q9H8N7 513 aaPredicted RBP9.6□□□□□ -0.87
ATM-225ENST00000601453 POLMQ9NP87 494 aaPredicted RBP9.6□□□□□ -0.87
ATM-225ENST00000601453 ERVH48-1M5A8F1 160 aa9.59□□□□□ -0.87
ATM-225ENST00000601453 LILRA1O75019 489 aa9.59□□□□□ -0.87
ATM-225ENST00000601453 ADD1P35611 737 aaKnown RBP9.58□□□□□ -0.88
ATM-225ENST00000601453 GSK3AP49840 483 aa9.58□□□□□ -0.88
ATM-225ENST00000601453 RAB15P59190 212 aa9.58□□□□□ -0.88
ATM-225ENST00000601453 RNFT1Q5M7Z0 435 aa9.58□□□□□ -0.88
ATM-225ENST00000601453 SEPT12Q8IYM1 358 aa9.58□□□□□ -0.88
ATM-225ENST00000601453 VWA5B2Q8N398 1253 aa9.58□□□□□ -0.88
ATM-225ENST00000601453 GOPCQ9HD26 462 aa9.58□□□□□ -0.88
ATM-225ENST00000601453 SENP3-EIF4A1A0A087X0R7 540 aa9.57□□□□□ -0.88
ATM-225ENST00000601453 PTGIRP43119 386 aa9.57□□□□□ -0.88
ATM-225ENST00000601453 SV2AQ7L0J3 742 aa9.57□□□□□ -0.88
ATM-225ENST00000601453 KDF1Q8NAX2 398 aaPredicted RBP9.57□□□□□ -0.88
ATM-225ENST00000601453 TRIM34Q9BYJ4 488 aa9.57□□□□□ -0.88
ATM-225ENST00000601453 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
ATM-225ENST00000601453 ADAMTS8Q9UP79 889 aa9.56□□□□□ -0.88
ATM-225ENST00000601453 CDC14CA4D256 554 aa9.55□□□□□ -0.88
ATM-225ENST00000601453 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
ATM-225ENST00000601453 TRIM52Q96A61 297 aa9.55□□□□□ -0.88
ATM-225ENST00000601453 BCANQ96GW7 911 aa9.55□□□□□ -0.88
ATM-225ENST00000601453 SLURP2P0DP57 97 aa9.54□□□□□ -0.88
ATM-225ENST00000601453 ZNF385CQ66K41 422 aaPredicted RBP9.54□□□□□ -0.88
ATM-225ENST00000601453 RNF225M0QZC1 329 aaPredicted RBP9.52□□□□□ -0.89
ATM-225ENST00000601453 LYSMD3Q7Z3D4 306 aa9.52□□□□□ -0.89
ATM-225ENST00000601453 SVOPQ8N4V2 548 aa9.52□□□□□ -0.89
ATM-225ENST00000601453 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.89
ATM-225ENST00000601453 ZBBXA8MT70 800 aa9.51□□□□□ -0.89
ATM-225ENST00000601453 RNF144AP50876 292 aaPredicted RBP9.51□□□□□ -0.89
ATM-225ENST00000601453 CYLDQ9NQC7 956 aa9.51□□□□□ -0.89
ATM-225ENST00000601453 RASSF7Q02833 373 aa9.5□□□□□ -0.89
ATM-225ENST00000601453 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
ATM-225ENST00000601453 WHAMMQ8TF30 809 aa9.5□□□□□ -0.89
ATM-225ENST00000601453 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
ATM-225ENST00000601453 ARHGEF15O94989 841 aa9.49□□□□□ -0.89
ATM-225ENST00000601453 TMEM151AQ8N4L1 468 aa9.49□□□□□ -0.89
ATM-225ENST00000601453 KCTD17Q8N5Z5 321 aa9.49□□□□□ -0.89
ATM-225ENST00000601453 GJD4Q96KN9 370 aaPredicted RBP9.49□□□□□ -0.89
ATM-225ENST00000601453 GDF11O95390 407 aa9.48□□□□□ -0.89
ATM-225ENST00000601453 FBXO45P0C2W1 286 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms