RNA–Protein interactions for RNA: ENST00000601453.2

ATM-225, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-225ENST00000601453 AEBP2Q6ZN18 517 aaPredicted RBP28.7■■■□□ 2.18
ATM-225ENST00000601453 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
ATM-225ENST00000601453 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
ATM-225ENST00000601453 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
ATM-225ENST00000601453 FOXD1Q16676 465 aa22.81■■□□□ 1.24
ATM-225ENST00000601453 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
ATM-225ENST00000601453 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
ATM-225ENST00000601453 MSH5O43196 834 aa21.35■■□□□ 1.01
ATM-225ENST00000601453 PIAS4Q8N2W9 510 aaPredicted RBP21.32■■□□□ 1
ATM-225ENST00000601453 ADRA2BP18089 450 aa21.28■■□□□ 1
ATM-225ENST00000601453 POTEDQ86YR6 584 aa20.73■□□□□ 0.91
ATM-225ENST00000601453 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
ATM-225ENST00000601453 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
ATM-225ENST00000601453 DMRT2Q9Y5R5 561 aa19.43■□□□□ 0.7
ATM-225ENST00000601453 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
ATM-225ENST00000601453 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
ATM-225ENST00000601453 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
ATM-225ENST00000601453 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
ATM-225ENST00000601453 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
ATM-225ENST00000601453 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
ATM-225ENST00000601453 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
ATM-225ENST00000601453 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
ATM-225ENST00000601453 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
ATM-225ENST00000601453 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
ATM-225ENST00000601453 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
ATM-225ENST00000601453 KCNA4P22459 653 aa17.84■□□□□ 0.45
ATM-225ENST00000601453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.449e-10■■□□□ 12.4
ATM-225ENST00000601453 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
ATM-225ENST00000601453 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
ATM-225ENST00000601453 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
ATM-225ENST00000601453 CAPN15O75808 1086 aa17.15■□□□□ 0.34
ATM-225ENST00000601453 DSG3P32926 999 aa17.07■□□□□ 0.32
ATM-225ENST00000601453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
ATM-225ENST00000601453 APLP2Q06481 763 aa17.01■□□□□ 0.31
ATM-225ENST00000601453 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
ATM-225ENST00000601453 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
ATM-225ENST00000601453 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
ATM-225ENST00000601453 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
ATM-225ENST00000601453 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
ATM-225ENST00000601453 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
ATM-225ENST00000601453 ABCB7O75027 752 aa16.75■□□□□ 0.27
ATM-225ENST00000601453 FOXD4L1Q9NU39 408 aa16.65■□□□□ 0.26
ATM-225ENST00000601453 POLA2Q14181 598 aa16.46■□□□□ 0.23
ATM-225ENST00000601453 ZBTB22O15209 634 aa16.41■□□□□ 0.22
ATM-225ENST00000601453 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
ATM-225ENST00000601453 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
ATM-225ENST00000601453 POTEHQ6S545 545 aa16.26■□□□□ 0.19
ATM-225ENST00000601453 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
ATM-225ENST00000601453 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
ATM-225ENST00000601453 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
ATM-225ENST00000601453 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
ATM-225ENST00000601453 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
ATM-225ENST00000601453 FBLN2P98095 1184 aa15.77■□□□□ 0.12
ATM-225ENST00000601453 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
ATM-225ENST00000601453 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
ATM-225ENST00000601453 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
ATM-225ENST00000601453 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
ATM-225ENST00000601453 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
ATM-225ENST00000601453 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
ATM-225ENST00000601453 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
ATM-225ENST00000601453 PIP4P2Q8N4L2 257 aa15.53■□□□□ 0.08
ATM-225ENST00000601453 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
ATM-225ENST00000601453 FXR2P51116 673 aaKnown RBP eCLIP15.47■□□□□ 0.07
ATM-225ENST00000601453 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
ATM-225ENST00000601453 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.07
ATM-225ENST00000601453 SPDYE1Q8NFV5 336 aaPredicted RBP15.37■□□□□ 0.05
ATM-225ENST00000601453 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
ATM-225ENST00000601453 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
ATM-225ENST00000601453 HAX1O00165 279 aa15.23■□□□□ 0.03
ATM-225ENST00000601453 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATM-225ENST00000601453 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
ATM-225ENST00000601453 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
ATM-225ENST00000601453 EVX2Q03828 476 aa15.04■□□□□ -0
ATM-225ENST00000601453 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
ATM-225ENST00000601453 C19orf67A6NJJ6 358 aa14.97□□□□□ -0.01
ATM-225ENST00000601453 SPDYE4A6NLX3 237 aa14.94□□□□□ -0.02
ATM-225ENST00000601453 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
ATM-225ENST00000601453 FARP1Q9Y4F1 1045 aaPredicted RBP14.82□□□□□ -0.04
ATM-225ENST00000601453 CREBZFQ9NS37 354 aa14.73□□□□□ -0.05
ATM-225ENST00000601453 GABBR2O75899 941 aa14.72□□□□□ -0.05
ATM-225ENST00000601453 CD44P16070 742 aaKnown RBP14.71□□□□□ -0.05
ATM-225ENST00000601453 PROM2Q8N271 834 aa14.63□□□□□ -0.07
ATM-225ENST00000601453 CLCN6P51797 869 aa14.56□□□□□ -0.08
ATM-225ENST00000601453 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
ATM-225ENST00000601453 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
ATM-225ENST00000601453 MNX1P50219 401 aaPredicted RBP14.49□□□□□ -0.09
ATM-225ENST00000601453 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
ATM-225ENST00000601453 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
ATM-225ENST00000601453 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
ATM-225ENST00000601453 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
ATM-225ENST00000601453 LHX8Q68G74 356 aa14.32□□□□□ -0.12
ATM-225ENST00000601453 GALR2O43603 387 aaPredicted RBP14.3□□□□□ -0.12
ATM-225ENST00000601453 PHF12Q96QT6 1004 aa14.29□□□□□ -0.12
ATM-225ENST00000601453 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
ATM-225ENST00000601453 MIER1Q8N108 512 aa14.24□□□□□ -0.13
ATM-225ENST00000601453 FKBP8Q14318 412 aa14.22□□□□□ -0.13
ATM-225ENST00000601453 TSPYL2Q9H2G4 693 aaPredicted RBP14.18□□□□□ -0.14
ATM-225ENST00000601453 CCDC61Q9Y6R9 512 aa14.14□□□□□ -0.15
ATM-225ENST00000601453 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
ATM-225ENST00000601453 MS4A3Q96HJ5 214 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms