RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 SH3BP5LQ7L8J4 393 aa8.14□□□□□ -1.11
VRK3-222ENST00000601324 ZNF511Q8NB15 262 aa8.14□□□□□ -1.11
VRK3-222ENST00000601324 C1orf115Q9H7X2 142 aa8.14□□□□□ -1.11
VRK3-222ENST00000601324 SOGA1O94964 1423 aa8.13□□□□□ -1.11
VRK3-222ENST00000601324 SOX11P35716 441 aa8.13□□□□□ -1.11
VRK3-222ENST00000601324 CHMP7Q8WUX9 453 aaPredicted RBP8.13□□□□□ -1.11
VRK3-222ENST00000601324 OCSTAMPQ9BR26 566 aa8.13□□□□□ -1.11
VRK3-222ENST00000601324 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
VRK3-222ENST00000601324 KIF13AQ9H1H9 1805 aa8.13□□□□□ -1.11
VRK3-222ENST00000601324 EIF4G2P78344 907 aaKnown RBP eCLIP8.12□□□□□ -1.11
VRK3-222ENST00000601324 SH3RF1Q7Z6J0 888 aa8.12□□□□□ -1.11
VRK3-222ENST00000601324 GLMNQ92990 594 aa8.12□□□□□ -1.11
VRK3-222ENST00000601324 ARHGAP9Q9BRR9 750 aa8.12□□□□□ -1.11
VRK3-222ENST00000601324 GRIN2BQ13224 1484 aa8.12□□□□□ -1.11
VRK3-222ENST00000601324 WNT7BP56706 349 aa8.11□□□□□ -1.11
VRK3-222ENST00000601324 SH3BP2P78314 561 aa8.11□□□□□ -1.11
VRK3-222ENST00000601324 BPHLQ86WA6 291 aaPredicted RBP8.11□□□□□ -1.11
VRK3-222ENST00000601324 FOXJ1Q92949 421 aa8.11□□□□□ -1.11
VRK3-222ENST00000601324 CD2BP2O95400 341 aaKnown RBP8.1□□□□□ -1.11
VRK3-222ENST00000601324 LIAT1Q6ZQX7 453 aa8.1□□□□□ -1.11
VRK3-222ENST00000601324 EMID1Q96A84 441 aaPredicted RBP8.1□□□□□ -1.11
VRK3-222ENST00000601324 CALR3Q96L12 384 aaKnown RBP8.1□□□□□ -1.11
VRK3-222ENST00000601324 ALG2Q9H553 416 aa8.1□□□□□ -1.11
VRK3-222ENST00000601324 AGERQ15109 404 aa8.09□□□□□ -1.11
VRK3-222ENST00000601324 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
VRK3-222ENST00000601324 ZBTB33Q86T24 672 aa8.09□□□□□ -1.11
VRK3-222ENST00000601324 ADAM32Q8TC27 787 aa8.09□□□□□ -1.11
VRK3-222ENST00000601324 ADAMTS19Q8TE59 1207 aa8.09□□□□□ -1.11
VRK3-222ENST00000601324 ZNF592Q92610 1267 aa8.09□□□□□ -1.11
VRK3-222ENST00000601324 FGD5Q6ZNL6 1462 aa8.08□□□□□ -1.12
VRK3-222ENST00000601324 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
VRK3-222ENST00000601324 SLC19A1P41440 591 aa8.08□□□□□ -1.12
VRK3-222ENST00000601324 MCCD1P59942 119 aaPredicted RBP8.08□□□□□ -1.12
VRK3-222ENST00000601324 SKOR1P84550 965 aa8.08□□□□□ -1.12
VRK3-222ENST00000601324 SEMA3FQ13275 785 aa8.08□□□□□ -1.12
VRK3-222ENST00000601324 C4orf48Q5BLP8 95 aa8.08□□□□□ -1.12
VRK3-222ENST00000601324 CCDC82Q8N4S0 544 aa8.08□□□□□ -1.12
VRK3-222ENST00000601324 CARD14Q9BXL6 1004 aa8.08□□□□□ -1.12
VRK3-222ENST00000601324 NUP160Q12769 1436 aa8.07□□□□□ -1.12
VRK3-222ENST00000601324 ERFEQ4G0M1 354 aa8.07□□□□□ -1.12
VRK3-222ENST00000601324 C1QTNF2Q9BXJ5 285 aa8.07□□□□□ -1.12
VRK3-222ENST00000601324 PCDHB9Q9Y5E1 797 aa8.07□□□□□ -1.12
VRK3-222ENST00000601324 ABCC10Q5T3U5 1492 aa8.06□□□□□ -1.12
VRK3-222ENST00000601324 CEP170Q5SW79 1584 aa8.06□□□□□ -1.12
VRK3-222ENST00000601324 CCDC97Q96F63 343 aaPredicted RBP8.06□□□□□ -1.12
VRK3-222ENST00000601324 SERPINA10Q9UK55 444 aa8.06□□□□□ -1.12
VRK3-222ENST00000601324 CUX1P39880 1505 aa8.05□□□□□ -1.12
VRK3-222ENST00000601324 SHROOM2Q13796 1616 aa8.05□□□□□ -1.12
VRK3-222ENST00000601324 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
VRK3-222ENST00000601324 DZIP3Q86Y13 1208 aaKnown RBP8.05□□□□□ -1.12
VRK3-222ENST00000601324 RC3H1Q5TC82 1133 aaKnown RBP8.04□□□□□ -1.12
VRK3-222ENST00000601324 SPRYD7Q5W111 196 aa8.04□□□□□ -1.12
VRK3-222ENST00000601324 TRMT44Q8IYL2 757 aaKnown RBP8.04□□□□□ -1.12
VRK3-222ENST00000601324 FAM174AQ8TBP5 190 aa8.04□□□□□ -1.12
VRK3-222ENST00000601324 SLC10A4Q96EP9 437 aa8.04□□□□□ -1.12
VRK3-222ENST00000601324 V9GY48 417 aaPredicted RBP8.04□□□□□ -1.12
VRK3-222ENST00000601324 EHBP1Q8NDI1 1231 aa8.03□□□□□ -1.12
VRK3-222ENST00000601324 PRKD2Q9BZL6 878 aa8.03□□□□□ -1.12
VRK3-222ENST00000601324 CDV3Q9UKY7 258 aaKnown RBP8.03□□□□□ -1.12
VRK3-222ENST00000601324 GRIN2AQ12879 1464 aa8.02□□□□□ -1.13
VRK3-222ENST00000601324 WNT7AO00755 349 aa8.02□□□□□ -1.13
VRK3-222ENST00000601324 ZNF598Q86UK7 904 aaKnown RBP8.02□□□□□ -1.13
VRK3-222ENST00000601324 UCN2Q96RP3 112 aa8.02□□□□□ -1.13
VRK3-222ENST00000601324 ARID3AQ99856 593 aa8.02□□□□□ -1.13
VRK3-222ENST00000601324 CEP126Q9P2H0 1117 aa8.02□□□□□ -1.13
VRK3-222ENST00000601324 ABCA5Q8WWZ7 1642 aa8.02□□□□□ -1.13
VRK3-222ENST00000601324 MAPKBP1O60336 1514 aa8.02□□□□□ -1.13
VRK3-222ENST00000601324 DIP2BQ9P265 1576 aa8.01□□□□□ -1.13
VRK3-222ENST00000601324 FAM69CQ0P6D2 419 aa8.01□□□□□ -1.13
VRK3-222ENST00000601324 ZNF697Q5TEC3 545 aa8.01□□□□□ -1.13
VRK3-222ENST00000601324 ABCA10Q8WWZ4 1543 aa8.01□□□□□ -1.13
VRK3-222ENST00000601324 PBRM1Q86U86 1689 aa8□□□□□ -1.13
VRK3-222ENST00000601324 NBPF20Q3BBV1 942 aa8□□□□□ -1.13
VRK3-222ENST00000601324 NFATC2IPQ8NCF5 419 aa8□□□□□ -1.13
VRK3-222ENST00000601324 MAP4K5Q9Y4K4 846 aa8□□□□□ -1.13
VRK3-222ENST00000601324 SLFNL1Q499Z3 407 aa7.99□□□□□ -1.13
VRK3-222ENST00000601324 MPNDQ8N594 471 aa7.99□□□□□ -1.13
VRK3-222ENST00000601324 PPP1R12CQ9BZL4 782 aa7.99□□□□□ -1.13
VRK3-222ENST00000601324 HECW2Q9P2P5 1572 aa7.98□□□□□ -1.13
VRK3-222ENST00000601324 PALM3A6NDB9 673 aaPredicted RBP7.98□□□□□ -1.13
VRK3-222ENST00000601324 ESPNB1AK53 854 aa7.98□□□□□ -1.13
VRK3-222ENST00000601324 PIK3CDO00329 1044 aa7.98□□□□□ -1.13
VRK3-222ENST00000601324 SIAH2O43255 324 aa7.98□□□□□ -1.13
VRK3-222ENST00000601324 PHTF2Q8N3S3 785 aa7.98□□□□□ -1.13
VRK3-222ENST00000601324 MRGPRX2Q96LB1 330 aa7.98□□□□□ -1.13
VRK3-222ENST00000601324 CDK15Q96Q40 435 aa7.98□□□□□ -1.13
VRK3-222ENST00000601324 KDM6BO15054 1643 aa7.98□□□□□ -1.13
VRK3-222ENST00000601324 GIGYF1O75420 1035 aaPredicted RBP7.97□□□□□ -1.13
VRK3-222ENST00000601324 RGS20O76081 388 aa7.97□□□□□ -1.13
VRK3-222ENST00000601324 RNF20Q5VTR2 975 aa7.97□□□□□ -1.13
VRK3-222ENST00000601324 TBC1D9Q6ZT07 1266 aa7.97□□□□□ -1.13
VRK3-222ENST00000601324 VASH1Q7L8A9 365 aaPredicted RBP7.97□□□□□ -1.13
VRK3-222ENST00000601324 RNF135Q8IUD6 432 aa7.97□□□□□ -1.13
VRK3-222ENST00000601324 KCTD15Q96SI1 283 aaPredicted RBP7.97□□□□□ -1.13
VRK3-222ENST00000601324 PKD2L1Q9P0L9 805 aa7.97□□□□□ -1.13
VRK3-222ENST00000601324 TFIP11Q9UBB9 837 aaKnown RBP7.97□□□□□ -1.13
VRK3-222ENST00000601324 ADAMTS12P58397 1594 aa7.97□□□□□ -1.13
VRK3-222ENST00000601324 ADGRL1O94910 1474 aa7.96□□□□□ -1.13
VRK3-222ENST00000601324 ATP9BO43861 1147 aa7.96□□□□□ -1.14
VRK3-222ENST00000601324 CFAP70Q5T0N1 1121 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms