RNA–Protein interactions for RNA: ENST00000599872.1

SMIM7-218, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-218ENST00000599872 PHRF1Q9P1Y6 1649 aaKnown RBP10.72□□□□□ -0.69
SMIM7-218ENST00000599872 ATP7BP35670 1465 aa10.71□□□□□ -0.69
SMIM7-218ENST00000599872 DDB1Q16531 1140 aa10.71□□□□□ -0.69
SMIM7-218ENST00000599872 MARCH10Q8NA82 808 aaPredicted RBP10.71□□□□□ -0.69
SMIM7-218ENST00000599872 DHX57Q6P158 1386 aaKnown RBP10.7□□□□□ -0.7
SMIM7-218ENST00000599872 GRIN3BO60391 1043 aa10.7□□□□□ -0.7
SMIM7-218ENST00000599872 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
SMIM7-218ENST00000599872 POGKQ9P215 609 aa10.7□□□□□ -0.7
SMIM7-218ENST00000599872 APLP1P51693 650 aa10.69□□□□□ -0.7
SMIM7-218ENST00000599872 ZNF827Q17R98 1081 aa10.69□□□□□ -0.7
SMIM7-218ENST00000599872 LRRC37A3O60309 1634 aa10.69□□□□□ -0.7
SMIM7-218ENST00000599872 PIK3C2GO75747 1445 aa10.68□□□□□ -0.7
SMIM7-218ENST00000599872 MINK1Q8N4C8 1332 aaPredicted RBP10.68□□□□□ -0.7
SMIM7-218ENST00000599872 POLD1P28340 1107 aa10.68□□□□□ -0.7
SMIM7-218ENST00000599872 HOXD11P31277 338 aaPredicted RBP10.68□□□□□ -0.7
SMIM7-218ENST00000599872 LMO7Q8WWI1 1683 aa10.67□□□□□ -0.7
SMIM7-218ENST00000599872 ZBTB7CA1YPR0 619 aa10.67□□□□□ -0.7
SMIM7-218ENST00000599872 KIF3CO14782 793 aa10.67□□□□□ -0.7
SMIM7-218ENST00000599872 CFAP70Q5T0N1 1121 aa10.67□□□□□ -0.7
SMIM7-218ENST00000599872 RNF216Q9NWF9 866 aaPredicted RBP10.67□□□□□ -0.7
SMIM7-218ENST00000599872 COL5A2P05997 1499 aaPredicted RBP10.67□□□□□ -0.7
SMIM7-218ENST00000599872 CRB1P82279 1406 aa10.67□□□□□ -0.7
SMIM7-218ENST00000599872 ADCY9O60503 1353 aa10.66□□□□□ -0.7
SMIM7-218ENST00000599872 ANKRD30BQ9BXX2 1392 aa10.66□□□□□ -0.7
SMIM7-218ENST00000599872 C14orf93Q9H972 538 aaKnown RBP10.66□□□□□ -0.7
SMIM7-218ENST00000599872 HTRA3P83110 453 aa10.65□□□□□ -0.7
SMIM7-218ENST00000599872 CPDO75976 1380 aa10.65□□□□□ -0.71
SMIM7-218ENST00000599872 AATKQ6ZMQ8 1374 aa10.65□□□□□ -0.71
SMIM7-218ENST00000599872 TULP4Q9NRJ4 1543 aa10.64□□□□□ -0.71
SMIM7-218ENST00000599872 WASLO00401 505 aaPredicted RBP10.64□□□□□ -0.71
SMIM7-218ENST00000599872 TOM1L2Q6ZVM7 507 aa10.64□□□□□ -0.71
SMIM7-218ENST00000599872 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
SMIM7-218ENST00000599872 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
SMIM7-218ENST00000599872 PAPPAQ13219 1627 aa10.64□□□□□ -0.71
SMIM7-218ENST00000599872 TOPAZ1Q8N9V7 1692 aa10.63□□□□□ -0.71
SMIM7-218ENST00000599872 LRRC4BQ9NT99 713 aa10.63□□□□□ -0.71
SMIM7-218ENST00000599872 BCL9O00512 1426 aa10.63□□□□□ -0.71
SMIM7-218ENST00000599872 SPATA31E1Q6ZUB1 1445 aa10.63□□□□□ -0.71
SMIM7-218ENST00000599872 GCP02774 474 aa10.62□□□□□ -0.71
SMIM7-218ENST00000599872 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
SMIM7-218ENST00000599872 SLC16A10Q8TF71 515 aa10.62□□□□□ -0.71
SMIM7-218ENST00000599872 TRAK1Q9UPV9 953 aa10.62□□□□□ -0.71
SMIM7-218ENST00000599872 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
SMIM7-218ENST00000599872 AKAP12Q02952 1782 aa10.62□□□□□ -0.71
SMIM7-218ENST00000599872 PNPLA7Q6ZV29 1317 aa10.61□□□□□ -0.71
SMIM7-218ENST00000599872 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
SMIM7-218ENST00000599872 KLRG1Q96E93 195 aa10.61□□□□□ -0.71
SMIM7-218ENST00000599872 WWC3Q9ULE0 1092 aa10.61□□□□□ -0.71
SMIM7-218ENST00000599872 USP19O94966 1318 aa10.6□□□□□ -0.71
SMIM7-218ENST00000599872 NUDT16Q96DE0 195 aaKnown RBP10.6□□□□□ -0.71
SMIM7-218ENST00000599872 EXOC5O00471 708 aa10.59□□□□□ -0.71
SMIM7-218ENST00000599872 JMYQ8N9B5 988 aa10.59□□□□□ -0.71
SMIM7-218ENST00000599872 ACEP12821 1306 aa10.58□□□□□ -0.71
SMIM7-218ENST00000599872 COL24A1Q17RW2 1714 aa10.58□□□□□ -0.72
SMIM7-218ENST00000599872 KCNQ4P56696 695 aa10.58□□□□□ -0.72
SMIM7-218ENST00000599872 TFCP2L1Q9NZI6 479 aa10.58□□□□□ -0.72
SMIM7-218ENST00000599872 AXIN2Q9Y2T1 843 aa10.58□□□□□ -0.72
SMIM7-218ENST00000599872 WNK3Q9BYP7 1800 aa10.57□□□□□ -0.72
SMIM7-218ENST00000599872 TOMM70O94826 608 aa10.57□□□□□ -0.72
SMIM7-218ENST00000599872 MSL1Q68DK7 614 aa10.57□□□□□ -0.72
SMIM7-218ENST00000599872 NLRP13Q86W25 1043 aa10.57□□□□□ -0.72
SMIM7-218ENST00000599872 CDCA7Q9BWT1 371 aaPredicted RBP10.57□□□□□ -0.72
SMIM7-218ENST00000599872 WDR90Q96KV7 1748 aa10.57□□□□□ -0.72
SMIM7-218ENST00000599872 KAT6BQ8WYB5 2073 aa10.57□□□□□ -0.72
SMIM7-218ENST00000599872 WDR17Q8IZU2 1322 aa10.57□□□□□ -0.72
SMIM7-218ENST00000599872 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
SMIM7-218ENST00000599872 USP6P35125 1406 aa10.56□□□□□ -0.72
SMIM7-218ENST00000599872 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
SMIM7-218ENST00000599872 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
SMIM7-218ENST00000599872 TUBGCP6Q96RT7 1819 aa10.55□□□□□ -0.72
SMIM7-218ENST00000599872 POLR3AO14802 1390 aaPredicted RBP10.54□□□□□ -0.72
SMIM7-218ENST00000599872 BTAF1O14981 1849 aa10.54□□□□□ -0.72
SMIM7-218ENST00000599872 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
SMIM7-218ENST00000599872 ITSN1Q15811 1721 aa10.54□□□□□ -0.72
SMIM7-218ENST00000599872 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
SMIM7-218ENST00000599872 CARD10Q9BWT7 1032 aa10.53□□□□□ -0.72
SMIM7-218ENST00000599872 CDK19Q9BWU1 502 aa10.53□□□□□ -0.72
SMIM7-218ENST00000599872 QSER1Q2KHR3 1735 aa10.53□□□□□ -0.72
SMIM7-218ENST00000599872 ADGRB1O14514 1584 aa10.52□□□□□ -0.72
SMIM7-218ENST00000599872 TNS2Q63HR2 1409 aa10.52□□□□□ -0.73
SMIM7-218ENST00000599872 HSPA1AP0DMV8 641 aaKnown RBP10.52□□□□□ -0.73
SMIM7-218ENST00000599872 HSPA1BP0DMV9 641 aaKnown RBP10.52□□□□□ -0.73
SMIM7-218ENST00000599872 COL23A1Q86Y22 540 aaPredicted RBP10.52□□□□□ -0.73
SMIM7-218ENST00000599872 PPARGC1BQ86YN6 1023 aaKnown RBP10.52□□□□□ -0.73
SMIM7-218ENST00000599872 CD2APQ9Y5K6 639 aa10.52□□□□□ -0.73
SMIM7-218ENST00000599872 ARHGEF28Q8N1W1 1705 aaKnown RBP10.52□□□□□ -0.73
SMIM7-218ENST00000599872 NLRP6P59044 892 aa10.51□□□□□ -0.73
SMIM7-218ENST00000599872 SLC27A3Q5K4L6 730 aa10.51□□□□□ -0.73
SMIM7-218ENST00000599872 COL18A1P39060 1754 aa10.51□□□□□ -0.73
SMIM7-218ENST00000599872 IGSF1Q8N6C5 1336 aa10.51□□□□□ -0.73
SMIM7-218ENST00000599872 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
SMIM7-218ENST00000599872 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
SMIM7-218ENST00000599872 SOX12O15370 315 aa10.49□□□□□ -0.73
SMIM7-218ENST00000599872 RBM46Q8TBY0 533 aaKnown RBP10.49□□□□□ -0.73
SMIM7-218ENST00000599872 RGPD5Q99666 1765 aa10.48□□□□□ -0.73
SMIM7-218ENST00000599872 CPSF1Q10570 1443 aaKnown RBP10.48□□□□□ -0.73
SMIM7-218ENST00000599872 PPIP5K1Q6PFW1 1433 aa10.48□□□□□ -0.73
SMIM7-218ENST00000599872 C16orf71Q8IYS4 520 aaPredicted RBP10.47□□□□□ -0.73
SMIM7-218ENST00000599872 SLIT3O75094 1523 aa10.47□□□□□ -0.73
SMIM7-218ENST00000599872 ABCC6O95255 1503 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms