RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 BCL9LQ86UU0 1499 aa29.93■■■□□ 2.38
CHMP2A-204ENST00000597848 LTN1O94822 1766 aa29.93■■■□□ 2.38
CHMP2A-204ENST00000597848 CAMTA1Q9Y6Y1 1673 aa29.93■■■□□ 2.38
CHMP2A-204ENST00000597848 RALBP1Q15311 655 aa29.92■■■□□ 2.38
CHMP2A-204ENST00000597848 LTV1Q96GA3 475 aaPredicted RBP29.92■■■□□ 2.38
CHMP2A-204ENST00000597848 PLCH1Q4KWH8 1693 aa29.91■■■□□ 2.38
CHMP2A-204ENST00000597848 RTL1A6NKG5 1358 aa29.91■■■□□ 2.38
CHMP2A-204ENST00000597848 CSB-PGBD3P0DP91 1061 aa29.91■■■□□ 2.38
CHMP2A-204ENST00000597848 MTHFSP49914 203 aa29.91■■■□□ 2.38
CHMP2A-204ENST00000597848 CCDC9Q9Y3X0 531 aaKnown RBP29.91■■■□□ 2.38
CHMP2A-204ENST00000597848 FLT4P35916 1363 aa29.9■■■□□ 2.38
CHMP2A-204ENST00000597848 KIF24Q5T7B8 1368 aa29.9■■■□□ 2.38
CHMP2A-204ENST00000597848 PARD3Q8TEW0 1356 aa29.9■■■□□ 2.38
CHMP2A-204ENST00000597848 HSP90AB2PQ58FF8 381 aa29.9■■■□□ 2.38
CHMP2A-204ENST00000597848 QTRT2Q9H974 415 aaKnown RBP29.9■■■□□ 2.38
CHMP2A-204ENST00000597848 RGS17Q9UGC6 210 aaPredicted RBP29.9■■■□□ 2.38
CHMP2A-204ENST00000597848 LMO7Q8WWI1 1683 aa29.89■■■□□ 2.38
CHMP2A-204ENST00000597848 PPP2R1AP30153 589 aa29.89■■■□□ 2.38
CHMP2A-204ENST00000597848 ANKRD24Q8TF21 1146 aa29.89■■■□□ 2.38
CHMP2A-204ENST00000597848 TRPC5Q9UL62 973 aaPredicted RBP29.89■■■□□ 2.38
CHMP2A-204ENST00000597848 COL18A1P39060 1754 aa29.89■■■□□ 2.38
CHMP2A-204ENST00000597848 MAP2P11137 1827 aaKnown RBP29.89■■■□□ 2.38
CHMP2A-204ENST00000597848 BLMP54132 1417 aaPredicted RBP29.88■■■□□ 2.37
CHMP2A-204ENST00000597848 ABCC6O95255 1503 aa29.87■■■□□ 2.37
CHMP2A-204ENST00000597848 LARP1Q6PKG0 1096 aaKnown RBP29.87■■■□□ 2.37
CHMP2A-204ENST00000597848 NWD2Q9ULI1 1742 aa29.87■■■□□ 2.37
CHMP2A-204ENST00000597848 COL5A2P05997 1499 aaPredicted RBP29.87■■■□□ 2.37
CHMP2A-204ENST00000597848 VPS72Q15906 364 aa29.86■■■□□ 2.37
CHMP2A-204ENST00000597848 PRKRIP1Q9H875 184 aaPredicted RBP29.86■■■□□ 2.37
CHMP2A-204ENST00000597848 ANP32CO43423 234 aa29.85■■■□□ 2.37
CHMP2A-204ENST00000597848 TOM1L2Q6ZVM7 507 aa29.85■■■□□ 2.37
CHMP2A-204ENST00000597848 INSRP06213 1382 aa29.85■■■□□ 2.37
CHMP2A-204ENST00000597848 ERBB3P21860 1342 aa29.84■■■□□ 2.37
CHMP2A-204ENST00000597848 WDR17Q8IZU2 1322 aa29.84■■■□□ 2.37
CHMP2A-204ENST00000597848 PEAK1Q9H792 1746 aa29.84■■■□□ 2.37
CHMP2A-204ENST00000597848 SMG6Q86US8 1419 aaKnown RBP29.83■■■□□ 2.37
CHMP2A-204ENST00000597848 NLRP2Q9NX02 1062 aa29.83■■■□□ 2.37
CHMP2A-204ENST00000597848 POTEAQ6S8J7 498 aa29.82■■■□□ 2.36
CHMP2A-204ENST00000597848 USP35Q9P2H5 1018 aa29.82■■■□□ 2.36
CHMP2A-204ENST00000597848 RGPD5Q99666 1765 aa29.82■■■□□ 2.36
CHMP2A-204ENST00000597848 ATRNO75882 1429 aa29.81■■■□□ 2.36
CHMP2A-204ENST00000597848 NRAPQ86VF7 1730 aa29.81■■■□□ 2.36
CHMP2A-204ENST00000597848 GJD4Q96KN9 370 aaPredicted RBP29.8■■■□□ 2.36
CHMP2A-204ENST00000597848 SPATA31A5Q5VU36 1347 aa29.79■■■□□ 2.36
CHMP2A-204ENST00000597848 SPATA31A7Q8IWB4 1347 aa29.79■■■□□ 2.36
CHMP2A-204ENST00000597848 MYBBP1AQ9BQG0 1328 aaKnown RBP29.79■■■□□ 2.36
CHMP2A-204ENST00000597848 CFAP53Q96M91 514 aa29.79■■■□□ 2.36
CHMP2A-204ENST00000597848 CDK12Q9NYV4 1490 aaPredicted RBP29.79■■■□□ 2.36
CHMP2A-204ENST00000597848 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.78■■■□□ 2.36
CHMP2A-204ENST00000597848 CRB1P82279 1406 aa29.78■■■□□ 2.36
CHMP2A-204ENST00000597848 EIF4A2Q14240 407 aaKnown RBP29.77■■■□□ 2.36
CHMP2A-204ENST00000597848 SPATA31A1Q5TZJ5 1347 aa29.76■■■□□ 2.36
CHMP2A-204ENST00000597848 RXRBP28702 533 aa29.76■■■□□ 2.35
CHMP2A-204ENST00000597848 RBM6P78332 1123 aaKnown RBP29.76■■■□□ 2.35
CHMP2A-204ENST00000597848 CARD10Q9BWT7 1032 aa29.76■■■□□ 2.35
CHMP2A-204ENST00000597848 DIEXFQ68CQ4 756 aaKnown RBP29.74■■■□□ 2.35
CHMP2A-204ENST00000597848 TCP11L2Q8N4U5 519 aa29.74■■■□□ 2.35
CHMP2A-204ENST00000597848 DIAPH1O60610 1272 aaKnown RBP29.73■■■□□ 2.35
CHMP2A-204ENST00000597848 NBPF6Q5VWK0 638 aa29.73■■■□□ 2.35
CHMP2A-204ENST00000597848 NBPF4Q96M43 638 aa29.73■■■□□ 2.35
CHMP2A-204ENST00000597848 IL13P35225 146 aa29.71■■■□□ 2.35
CHMP2A-204ENST00000597848 FAM98CQ17RN3 349 aaKnown RBP29.7■■■□□ 2.35
CHMP2A-204ENST00000597848 USHBP1Q8N6Y0 703 aa29.7■■■□□ 2.35
CHMP2A-204ENST00000597848 A0A0G2JS52 829 aa29.69■■■□□ 2.34
CHMP2A-204ENST00000597848 MYT1Q01538 1121 aa29.69■■■□□ 2.34
CHMP2A-204ENST00000597848 EYA1Q99502 592 aa29.69■■■□□ 2.34
CHMP2A-204ENST00000597848 THRAP3Q9Y2W1 955 aaKnown RBP29.69■■■□□ 2.34
CHMP2A-204ENST00000597848 BARGINQ6ZT62 677 aa29.66■■■□□ 2.34
CHMP2A-204ENST00000597848 GLI3P10071 1580 aa29.65■■■□□ 2.34
CHMP2A-204ENST00000597848 U2SURPO15042 1029 aaKnown RBP29.65■■■□□ 2.34
CHMP2A-204ENST00000597848 NUDCQ9Y266 331 aa29.65■■■□□ 2.34
CHMP2A-204ENST00000597848 COL3A1P02461 1466 aaPredicted RBP29.63■■■□□ 2.33
CHMP2A-204ENST00000597848 FAM208AQ9UK61 1670 aaKnown RBP29.63■■■□□ 2.33
CHMP2A-204ENST00000597848 ONECUT3O60422 494 aaPredicted RBP29.61■■■□□ 2.33
CHMP2A-204ENST00000597848 IL2RBP14784 551 aa29.61■■■□□ 2.33
CHMP2A-204ENST00000597848 SEPT12Q8IYM1 358 aa29.61■■■□□ 2.33
CHMP2A-204ENST00000597848 CDCA7Q9BWT1 371 aaPredicted RBP29.61■■■□□ 2.33
CHMP2A-204ENST00000597848 IGSF1Q8N6C5 1336 aa29.61■■■□□ 2.33
CHMP2A-204ENST00000597848 RGPD2P0DJD1 1756 aa29.6■■■□□ 2.33
CHMP2A-204ENST00000597848 RAPGEF4Q8WZA2 1011 aa29.6■■■□□ 2.33
CHMP2A-204ENST00000597848 SULT6B1Q6IMI4 303 aa29.59■■■□□ 2.33
CHMP2A-204ENST00000597848 HMOX1P09601 288 aa29.57■■■□□ 2.32
CHMP2A-204ENST00000597848 U2AF1L5P0DN76 240 aaPredicted RBP29.57■■■□□ 2.32
CHMP2A-204ENST00000597848 U2AF1Q01081 240 aaKnown RBP eCLIP29.57■■■□□ 2.32
CHMP2A-204ENST00000597848 AEBP1Q8IUX7 1158 aa29.57■■■□□ 2.32
CHMP2A-204ENST00000597848 TATP17735 454 aaPredicted RBP29.56■■■□□ 2.32
CHMP2A-204ENST00000597848 CCDC184Q52MB2 194 aa29.54■■■□□ 2.32
CHMP2A-204ENST00000597848 MRS2Q9HD23 443 aa29.54■■■□□ 2.32
CHMP2A-204ENST00000597848 EXOC5O00471 708 aa29.53■■■□□ 2.32
CHMP2A-204ENST00000597848 DDB1Q16531 1140 aa29.53■■■□□ 2.32
CHMP2A-204ENST00000597848 DISP2A7MBM2 1401 aa29.53■■■□□ 2.32
CHMP2A-204ENST00000597848 RGS12O14924 1447 aa29.53■■■□□ 2.32
CHMP2A-204ENST00000597848 NCAPD2Q15021 1401 aa29.52■■■□□ 2.32
CHMP2A-204ENST00000597848 PDE3BQ13370 1112 aa29.5■■■□□ 2.31
CHMP2A-204ENST00000597848 WDR43Q15061 677 aaKnown RBP eCLIP29.5■■■□□ 2.31
CHMP2A-204ENST00000597848 MEGF6O75095 1541 aa29.5■■■□□ 2.31
CHMP2A-204ENST00000597848 RGPD1P0DJD0 1748 aa29.48■■■□□ 2.31
CHMP2A-204ENST00000597848 ZCRB1Q8TBF4 217 aaKnown RBP29.48■■■□□ 2.31
CHMP2A-204ENST00000597848 KDRP35968 1356 aa29.48■■■□□ 2.31
CHMP2A-204ENST00000597848 THSD7AQ9UPZ6 1657 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms