RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ZC3H6P61129 1189 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-213ENST00000597325 STK32BQ9NY57 414 aa16.85■□□□□ 0.29
SHKBP1-213ENST00000597325 TRAK1Q9UPV9 953 aa16.85■□□□□ 0.29
SHKBP1-213ENST00000597325 PRR36Q9H6K5 1346 aa16.85■□□□□ 0.29
SHKBP1-213ENST00000597325 EVA1CP58658 441 aa16.84■□□□□ 0.29
SHKBP1-213ENST00000597325 LRRC37A3O60309 1634 aa16.83■□□□□ 0.28
SHKBP1-213ENST00000597325 SAFB2Q14151 953 aaKnown RBP eCLIP16.83■□□□□ 0.28
SHKBP1-213ENST00000597325 PRAM1Q96QH2 718 aa16.83■□□□□ 0.28
SHKBP1-213ENST00000597325 QRICH2Q9H0J4 1663 aa16.83■□□□□ 0.28
SHKBP1-213ENST00000597325 BCL9O00512 1426 aa16.82■□□□□ 0.28
SHKBP1-213ENST00000597325 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-213ENST00000597325 TXNRD1Q16881 649 aa16.82■□□□□ 0.28
SHKBP1-213ENST00000597325 AATKQ6ZMQ8 1374 aa16.81■□□□□ 0.28
SHKBP1-213ENST00000597325 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-213ENST00000597325 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
SHKBP1-213ENST00000597325 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
SHKBP1-213ENST00000597325 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-213ENST00000597325 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
SHKBP1-213ENST00000597325 CPDO75976 1380 aa16.79■□□□□ 0.28
SHKBP1-213ENST00000597325 ZNF316A6NFI3 1004 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-213ENST00000597325 POGKQ9P215 609 aa16.79■□□□□ 0.28
SHKBP1-213ENST00000597325 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
SHKBP1-213ENST00000597325 COL24A1Q17RW2 1714 aa16.78■□□□□ 0.28
SHKBP1-213ENST00000597325 COL5A2P05997 1499 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-213ENST00000597325 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.27
SHKBP1-213ENST00000597325 SLC24A1O60721 1099 aa16.76■□□□□ 0.27
SHKBP1-213ENST00000597325 NGDNQ8NEJ9 315 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-213ENST00000597325 CRB1P82279 1406 aa16.76■□□□□ 0.27
SHKBP1-213ENST00000597325 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
SHKBP1-213ENST00000597325 DDB1Q16531 1140 aa16.75■□□□□ 0.27
SHKBP1-213ENST00000597325 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-213ENST00000597325 DNAJC5GQ8N7S2 189 aa16.75■□□□□ 0.27
SHKBP1-213ENST00000597325 MARCH10Q8NA82 808 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-213ENST00000597325 TMF1P82094 1093 aa16.74■□□□□ 0.27
SHKBP1-213ENST00000597325 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
SHKBP1-213ENST00000597325 NLGN2Q8NFZ4 835 aa16.74■□□□□ 0.27
SHKBP1-213ENST00000597325 GPBP1L1Q9HC44 474 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-213ENST00000597325 ADCY9O60503 1353 aa16.74■□□□□ 0.27
SHKBP1-213ENST00000597325 COL13A1Q5TAT6 717 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-213ENST00000597325 TESK2Q96S53 571 aa16.73■□□□□ 0.27
SHKBP1-213ENST00000597325 AKAP12Q02952 1782 aa16.72■□□□□ 0.27
SHKBP1-213ENST00000597325 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
SHKBP1-213ENST00000597325 WNK3Q9BYP7 1800 aa16.71■□□□□ 0.27
SHKBP1-213ENST00000597325 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-213ENST00000597325 SLC34A2O95436 690 aa16.71■□□□□ 0.27
SHKBP1-213ENST00000597325 CDCA8Q53HL2 280 aa16.71■□□□□ 0.27
SHKBP1-213ENST00000597325 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
SHKBP1-213ENST00000597325 USP19O94966 1318 aa16.7■□□□□ 0.26
SHKBP1-213ENST00000597325 CAPN15O75808 1086 aa16.7■□□□□ 0.26
SHKBP1-213ENST00000597325 PRELPP51888 382 aa16.7■□□□□ 0.26
SHKBP1-213ENST00000597325 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
SHKBP1-213ENST00000597325 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-213ENST00000597325 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
SHKBP1-213ENST00000597325 ITSN1Q15811 1721 aa16.69■□□□□ 0.26
SHKBP1-213ENST00000597325 CCDC7Q96M83 1385 aa16.68■□□□□ 0.26
SHKBP1-213ENST00000597325 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
SHKBP1-213ENST00000597325 POLR3GLQ9BT43 218 aa16.68■□□□□ 0.26
SHKBP1-213ENST00000597325 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
SHKBP1-213ENST00000597325 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
SHKBP1-213ENST00000597325 APLP1P51693 650 aa16.67■□□□□ 0.26
SHKBP1-213ENST00000597325 SLC16A10Q8TF71 515 aa16.67■□□□□ 0.26
SHKBP1-213ENST00000597325 POLR3AO14802 1390 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-213ENST00000597325 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
SHKBP1-213ENST00000597325 KIF3CO14782 793 aa16.65■□□□□ 0.26
SHKBP1-213ENST00000597325 GCP02774 474 aa16.65■□□□□ 0.26
SHKBP1-213ENST00000597325 POLD1P28340 1107 aa16.65■□□□□ 0.26
SHKBP1-213ENST00000597325 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
SHKBP1-213ENST00000597325 SRPK2P78362 688 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-213ENST00000597325 ZNF526Q8TF50 670 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-213ENST00000597325 LRRC4BQ9NT99 713 aa16.63■□□□□ 0.25
SHKBP1-213ENST00000597325 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
SHKBP1-213ENST00000597325 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
SHKBP1-213ENST00000597325 NUDT16Q96DE0 195 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-213ENST00000597325 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-213ENST00000597325 COL18A1P39060 1754 aa16.61■□□□□ 0.25
SHKBP1-213ENST00000597325 PUS7Q96PZ0 661 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-213ENST00000597325 CDK19Q9BWU1 502 aa16.61■□□□□ 0.25
SHKBP1-213ENST00000597325 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
SHKBP1-213ENST00000597325 TNS4Q8IZW8 715 aa16.6■□□□□ 0.25
SHKBP1-213ENST00000597325 ACEP12821 1306 aa16.6■□□□□ 0.25
SHKBP1-213ENST00000597325 PNPLA7Q6ZV29 1317 aa16.6■□□□□ 0.25
SHKBP1-213ENST00000597325 TUBGCP6Q96RT7 1819 aa16.59■□□□□ 0.25
SHKBP1-213ENST00000597325 JMYQ8N9B5 988 aa16.59■□□□□ 0.25
SHKBP1-213ENST00000597325 CABP2Q9NPB3 220 aa16.59■□□□□ 0.25
SHKBP1-213ENST00000597325 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
SHKBP1-213ENST00000597325 BTAF1O14981 1849 aa16.58■□□□□ 0.24
SHKBP1-213ENST00000597325 NLRP13Q86W25 1043 aa16.57■□□□□ 0.24
SHKBP1-213ENST00000597325 WDR90Q96KV7 1748 aa16.56■□□□□ 0.24
SHKBP1-213ENST00000597325 DDX10Q13206 875 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-213ENST00000597325 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
SHKBP1-213ENST00000597325 TNS2Q63HR2 1409 aa16.55■□□□□ 0.24
SHKBP1-213ENST00000597325 PLEKHG3A1L390 1219 aa16.55■□□□□ 0.24
SHKBP1-213ENST00000597325 EXOC5O00471 708 aa16.55■□□□□ 0.24
SHKBP1-213ENST00000597325 TMC1Q8TDI8 760 aa16.55■□□□□ 0.24
SHKBP1-213ENST00000597325 SLIT3O75094 1523 aa16.55■□□□□ 0.24
SHKBP1-213ENST00000597325 USP6P35125 1406 aa16.54■□□□□ 0.24
SHKBP1-213ENST00000597325 BRD4O60885 1362 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-213ENST00000597325 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
SHKBP1-213ENST00000597325 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
SHKBP1-213ENST00000597325 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms