RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 LMO7Q8WWI1 1683 aa22.68■■□□□ 1.22
CHERP-206ENST00000597261 TCP11L2Q8N4U5 519 aa22.67■■□□□ 1.22
CHERP-206ENST00000597261 THRAP3Q9Y2W1 955 aaKnown RBP22.67■■□□□ 1.22
CHERP-206ENST00000597261 COL5A2P05997 1499 aaPredicted RBP22.66■■□□□ 1.22
CHERP-206ENST00000597261 FBLN1P23142 703 aa22.66■■□□□ 1.22
CHERP-206ENST00000597261 KIF7Q2M1P5 1343 aa22.65■■□□□ 1.22
CHERP-206ENST00000597261 IP6K1Q92551 441 aa22.65■■□□□ 1.22
CHERP-206ENST00000597261 USP35Q9P2H5 1018 aa22.65■■□□□ 1.22
CHERP-206ENST00000597261 USP54Q70EL1 1684 aa22.65■■□□□ 1.22
CHERP-206ENST00000597261 WDR17Q8IZU2 1322 aa22.64■■□□□ 1.22
CHERP-206ENST00000597261 COL18A1P39060 1754 aa22.64■■□□□ 1.22
CHERP-206ENST00000597261 KRT27Q7Z3Y8 459 aa22.64■■□□□ 1.21
CHERP-206ENST00000597261 NSD3Q9BZ95 1437 aa22.64■■□□□ 1.21
CHERP-206ENST00000597261 TOM1L2Q6ZVM7 507 aa22.63■■□□□ 1.21
CHERP-206ENST00000597261 CGNL1Q0VF96 1302 aa22.62■■□□□ 1.21
CHERP-206ENST00000597261 CARD10Q9BWT7 1032 aa22.62■■□□□ 1.21
CHERP-206ENST00000597261 CRB1P82279 1406 aa22.62■■□□□ 1.21
CHERP-206ENST00000597261 MAP3K19Q56UN5 1328 aa22.61■■□□□ 1.21
CHERP-206ENST00000597261 MYOM1P52179 1685 aa22.59■■□□□ 1.21
CHERP-206ENST00000597261 A0A0G2JS52 829 aa22.59■■□□□ 1.21
CHERP-206ENST00000597261 CSB-PGBD3P0DP91 1061 aa22.59■■□□□ 1.21
CHERP-206ENST00000597261 MYT1Q01538 1121 aa22.59■■□□□ 1.21
CHERP-206ENST00000597261 RRS1Q15050 365 aaKnown RBP22.58■■□□□ 1.21
CHERP-206ENST00000597261 CCDC125Q86Z20 511 aa22.58■■□□□ 1.21
CHERP-206ENST00000597261 ERBB3P21860 1342 aa22.57■■□□□ 1.2
CHERP-206ENST00000597261 ABCC6O95255 1503 aa22.57■■□□□ 1.2
CHERP-206ENST00000597261 HOXC9P31274 260 aa22.57■■□□□ 1.2
CHERP-206ENST00000597261 AMPHP49418 695 aa22.57■■□□□ 1.2
CHERP-206ENST00000597261 ANKRD24Q8TF21 1146 aa22.57■■□□□ 1.2
CHERP-206ENST00000597261 WASHC2AQ641Q2 1341 aa22.56■■□□□ 1.2
CHERP-206ENST00000597261 PER1O15534 1290 aaPredicted RBP22.55■■□□□ 1.2
CHERP-206ENST00000597261 CDCA7Q9BWT1 371 aaPredicted RBP22.55■■□□□ 1.2
CHERP-206ENST00000597261 KNSTRNQ9Y448 316 aa22.54■■□□□ 1.2
CHERP-206ENST00000597261 BLMP54132 1417 aaPredicted RBP22.54■■□□□ 1.2
CHERP-206ENST00000597261 CCDC7Q96M83 1385 aa22.53■■□□□ 1.2
CHERP-206ENST00000597261 PDE3BQ13370 1112 aa22.53■■□□□ 1.2
CHERP-206ENST00000597261 NLRP2Q9NX02 1062 aa22.53■■□□□ 1.2
CHERP-206ENST00000597261 THSD7AQ9UPZ6 1657 aa22.51■■□□□ 1.19
CHERP-206ENST00000597261 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
CHERP-206ENST00000597261 AMER1Q5JTC6 1135 aaPredicted RBP22.5■■□□□ 1.19
CHERP-206ENST00000597261 FAM182BQ5T319 152 aa22.5■■□□□ 1.19
CHERP-206ENST00000597261 FAM196AQ6ZSG2 479 aa22.5■■□□□ 1.19
CHERP-206ENST00000597261 LTV1Q96GA3 475 aaPredicted RBP22.5■■□□□ 1.19
CHERP-206ENST00000597261 RTL1A6NKG5 1358 aa22.5■■□□□ 1.19
CHERP-206ENST00000597261 HSP90AB2PQ58FF8 381 aa22.49■■□□□ 1.19
CHERP-206ENST00000597261 POLKQ9UBT6 870 aa22.49■■□□□ 1.19
CHERP-206ENST00000597261 BRWD3Q6RI45 1802 aa22.48■■□□□ 1.19
CHERP-206ENST00000597261 DDB1Q16531 1140 aa22.48■■□□□ 1.19
CHERP-206ENST00000597261 EMILIN1Q9Y6C2 1016 aa22.48■■□□□ 1.19
CHERP-206ENST00000597261 NSD2O96028 1365 aa22.48■■□□□ 1.19
CHERP-206ENST00000597261 EP400Q96L91 3159 aa22.47■■□□□ 1.19
CHERP-206ENST00000597261 INSRP06213 1382 aa22.47■■□□□ 1.19
CHERP-206ENST00000597261 EXOC5O00471 708 aa22.46■■□□□ 1.19
CHERP-206ENST00000597261 DISP2A7MBM2 1401 aa22.46■■□□□ 1.19
CHERP-206ENST00000597261 RGPD5Q99666 1765 aa22.45■■□□□ 1.19
CHERP-206ENST00000597261 MORC1Q86VD1 984 aa22.45■■□□□ 1.18
CHERP-206ENST00000597261 IL2RBP14784 551 aa22.44■■□□□ 1.18
CHERP-206ENST00000597261 FLT4P35916 1363 aa22.44■■□□□ 1.18
CHERP-206ENST00000597261 TNNT2P45379 298 aaPredicted RBP22.44■■□□□ 1.18
CHERP-206ENST00000597261 NBPF6Q5VWK0 638 aa22.44■■□□□ 1.18
CHERP-206ENST00000597261 NBPF4Q96M43 638 aa22.44■■□□□ 1.18
CHERP-206ENST00000597261 LTN1O94822 1766 aa22.43■■□□□ 1.18
CHERP-206ENST00000597261 MARCH10Q8NA82 808 aaPredicted RBP22.43■■□□□ 1.18
CHERP-206ENST00000597261 PPM1GO15355 546 aaPredicted RBP22.42■■□□□ 1.18
CHERP-206ENST00000597261 KIF20BQ96Q89 1820 aa22.42■■□□□ 1.18
CHERP-206ENST00000597261 SF3B2Q13435 895 aaKnown RBP22.4■■□□□ 1.18
CHERP-206ENST00000597261 TRIM37O94972 964 aa22.38■■□□□ 1.17
CHERP-206ENST00000597261 ZEB1P37275 1124 aaPredicted RBP22.38■■□□□ 1.17
CHERP-206ENST00000597261 DEFB132Q7Z7B7 95 aa22.38■■□□□ 1.17
CHERP-206ENST00000597261 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
CHERP-206ENST00000597261 PARP4Q9UKK3 1724 aaKnown RBP22.37■■□□□ 1.17
CHERP-206ENST00000597261 BCL9O00512 1426 aa22.36■■□□□ 1.17
CHERP-206ENST00000597261 PEAK1Q9H792 1746 aa22.34■■□□□ 1.17
CHERP-206ENST00000597261 SMG6Q86US8 1419 aaKnown RBP22.34■■□□□ 1.17
CHERP-206ENST00000597261 CC2D1BQ5T0F9 858 aaKnown RBP22.34■■□□□ 1.17
CHERP-206ENST00000597261 EYA1Q99502 592 aa22.34■■□□□ 1.17
CHERP-206ENST00000597261 BAG6P46379 1132 aa22.33■■□□□ 1.17
CHERP-206ENST00000597261 EIF4A2Q14240 407 aaKnown RBP22.33■■□□□ 1.17
CHERP-206ENST00000597261 USHBP1Q8N6Y0 703 aa22.33■■□□□ 1.17
CHERP-206ENST00000597261 OVOS2A0A0G2JMS6 1433 aa22.32■■□□□ 1.16
CHERP-206ENST00000597261 ZCRB1Q8TBF4 217 aaKnown RBP22.32■■□□□ 1.16
CHERP-206ENST00000597261 APBA3O96018 575 aa22.31■■□□□ 1.16
CHERP-206ENST00000597261 BCL11BQ9C0K0 894 aaPredicted RBP22.31■■□□□ 1.16
CHERP-206ENST00000597261 MTHFSP49914 203 aa22.3■■□□□ 1.16
CHERP-206ENST00000597261 EN1Q05925 392 aaPredicted RBP22.3■■□□□ 1.16
CHERP-206ENST00000597261 RAPGEF4Q8WZA2 1011 aa22.3■■□□□ 1.16
CHERP-206ENST00000597261 CAMKK2Q96RR4 588 aa22.3■■□□□ 1.16
CHERP-206ENST00000597261 TNS2Q63HR2 1409 aa22.3■■□□□ 1.16
CHERP-206ENST00000597261 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
CHERP-206ENST00000597261 TATP17735 454 aaPredicted RBP22.29■■□□□ 1.16
CHERP-206ENST00000597261 DDX54Q8TDD1 881 aaKnown RBP22.29■■□□□ 1.16
CHERP-206ENST00000597261 LRRC37A3O60309 1634 aa22.28■■□□□ 1.16
CHERP-206ENST00000597261 PTF1AQ7RTS3 328 aa22.28■■□□□ 1.16
CHERP-206ENST00000597261 NCAPD2Q15021 1401 aa22.28■■□□□ 1.16
CHERP-206ENST00000597261 ANKRD26Q9UPS8 1709 aa22.28■■□□□ 1.16
CHERP-206ENST00000597261 IL13P35225 146 aa22.26■■□□□ 1.15
CHERP-206ENST00000597261 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
CHERP-206ENST00000597261 MEGF6O75095 1541 aa22.26■■□□□ 1.15
CHERP-206ENST00000597261 PLSCR1O15162 318 aa22.25■■□□□ 1.15
CHERP-206ENST00000597261 KCNQ2O43526 872 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms