RNA–Protein interactions for RNA: ENST00000595984.5

COPE-205, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 434 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-205ENST00000595984 STRN4Q9NRL3 753 aa16.9■□□□□ 0.3
COPE-205ENST00000595984 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
COPE-205ENST00000595984 CCDC7Q96M83 1385 aa16.89■□□□□ 0.3
COPE-205ENST00000595984 AXIN2Q9Y2T1 843 aa16.88■□□□□ 0.29
COPE-205ENST00000595984 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
COPE-205ENST00000595984 MAP2P11137 1827 aaKnown RBP16.87■□□□□ 0.29
COPE-205ENST00000595984 EVA1CP58658 441 aa16.87■□□□□ 0.29
COPE-205ENST00000595984 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
COPE-205ENST00000595984 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
COPE-205ENST00000595984 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
COPE-205ENST00000595984 FBLN1P23142 703 aa16.86■□□□□ 0.29
COPE-205ENST00000595984 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
COPE-205ENST00000595984 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
COPE-205ENST00000595984 THSD7AQ9UPZ6 1657 aa16.85■□□□□ 0.29
COPE-205ENST00000595984 SPATA31A1Q5TZJ5 1347 aa16.85■□□□□ 0.29
COPE-205ENST00000595984 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
COPE-205ENST00000595984 RGPD2P0DJD1 1756 aa16.83■□□□□ 0.28
COPE-205ENST00000595984 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
COPE-205ENST00000595984 CRB1P82279 1406 aa16.83■□□□□ 0.28
COPE-205ENST00000595984 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.28
COPE-205ENST00000595984 FAM208AQ9UK61 1670 aaKnown RBP16.82■□□□□ 0.28
COPE-205ENST00000595984 ONECUT3O60422 494 aaPredicted RBP16.82■□□□□ 0.28
COPE-205ENST00000595984 FAM98CQ17RN3 349 aaKnown RBP16.82■□□□□ 0.28
COPE-205ENST00000595984 WDR17Q8IZU2 1322 aa16.81■□□□□ 0.28
COPE-205ENST00000595984 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
COPE-205ENST00000595984 SEPT12Q8IYM1 358 aa16.81■□□□□ 0.28
COPE-205ENST00000595984 USP35Q9P2H5 1018 aa16.81■□□□□ 0.28
COPE-205ENST00000595984 BLMP54132 1417 aaPredicted RBP16.8■□□□□ 0.28
COPE-205ENST00000595984 PARP4Q9UKK3 1724 aaKnown RBP16.8■□□□□ 0.28
COPE-205ENST00000595984 IP6K1Q92551 441 aa16.8■□□□□ 0.28
COPE-205ENST00000595984 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
COPE-205ENST00000595984 NSD2O96028 1365 aa16.79■□□□□ 0.28
COPE-205ENST00000595984 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
COPE-205ENST00000595984 RTL1A6NKG5 1358 aa16.78■□□□□ 0.28
COPE-205ENST00000595984 ERBB3P21860 1342 aa16.78■□□□□ 0.28
COPE-205ENST00000595984 PER1O15534 1290 aaPredicted RBP16.78■□□□□ 0.28
COPE-205ENST00000595984 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
COPE-205ENST00000595984 HOXC9P31274 260 aa16.78■□□□□ 0.28
COPE-205ENST00000595984 AMPHP49418 695 aa16.78■□□□□ 0.28
COPE-205ENST00000595984 TCP11L2Q8N4U5 519 aa16.78■□□□□ 0.28
COPE-205ENST00000595984 A0A0G2JS52 829 aa16.77■□□□□ 0.28
COPE-205ENST00000595984 MYT1Q01538 1121 aa16.77■□□□□ 0.28
COPE-205ENST00000595984 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.28
COPE-205ENST00000595984 BARGINQ6ZT62 677 aa16.77■□□□□ 0.28
COPE-205ENST00000595984 ANKRD24Q8TF21 1146 aa16.77■□□□□ 0.28
COPE-205ENST00000595984 THRAP3Q9Y2W1 955 aaKnown RBP16.77■□□□□ 0.28
COPE-205ENST00000595984 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
COPE-205ENST00000595984 LRRC37A3O60309 1634 aa16.76■□□□□ 0.27
COPE-205ENST00000595984 TNNT2P45379 298 aaPredicted RBP16.75■□□□□ 0.27
COPE-205ENST00000595984 CARD10Q9BWT7 1032 aa16.75■□□□□ 0.27
COPE-205ENST00000595984 SRCAPQ6ZRS2 3230 aa16.74■□□□□ 0.27
COPE-205ENST00000595984 UPF1Q92900 1129 aaKnown RBP eCLIP16.74■□□□□ 0.27
COPE-205ENST00000595984 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
COPE-205ENST00000595984 FLT4P35916 1363 aa16.74■□□□□ 0.27
COPE-205ENST00000595984 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
COPE-205ENST00000595984 KRT27Q7Z3Y8 459 aa16.73■□□□□ 0.27
COPE-205ENST00000595984 MORC1Q86VD1 984 aa16.73■□□□□ 0.27
COPE-205ENST00000595984 NLRP2Q9NX02 1062 aa16.73■□□□□ 0.27
COPE-205ENST00000595984 POLKQ9UBT6 870 aa16.73■□□□□ 0.27
COPE-205ENST00000595984 INSRP06213 1382 aa16.73■□□□□ 0.27
COPE-205ENST00000595984 DISP2A7MBM2 1401 aa16.72■□□□□ 0.27
COPE-205ENST00000595984 HSP90AB2PQ58FF8 381 aa16.72■□□□□ 0.27
COPE-205ENST00000595984 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
COPE-205ENST00000595984 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
COPE-205ENST00000595984 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
COPE-205ENST00000595984 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
COPE-205ENST00000595984 FAM182BQ5T319 152 aa16.68■□□□□ 0.26
COPE-205ENST00000595984 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
COPE-205ENST00000595984 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
COPE-205ENST00000595984 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
COPE-205ENST00000595984 RGPD1P0DJD0 1748 aa16.67■□□□□ 0.26
COPE-205ENST00000595984 SHANK3Q9BYB0 1731 aa16.67■□□□□ 0.26
COPE-205ENST00000595984 EP400Q96L91 3159 aa16.66■□□□□ 0.26
COPE-205ENST00000595984 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
COPE-205ENST00000595984 DDB1Q16531 1140 aa16.66■□□□□ 0.26
COPE-205ENST00000595984 NBPF6Q5VWK0 638 aa16.66■□□□□ 0.26
COPE-205ENST00000595984 NBPF4Q96M43 638 aa16.66■□□□□ 0.26
COPE-205ENST00000595984 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
COPE-205ENST00000595984 TNS2Q63HR2 1409 aa16.65■□□□□ 0.26
COPE-205ENST00000595984 IL2RBP14784 551 aa16.65■□□□□ 0.26
COPE-205ENST00000595984 USHBP1Q8N6Y0 703 aa16.65■□□□□ 0.26
COPE-205ENST00000595984 NCAPD2Q15021 1401 aa16.63■□□□□ 0.25
COPE-205ENST00000595984 MEGF6O75095 1541 aa16.63■□□□□ 0.25
COPE-205ENST00000595984 EXOC5O00471 708 aa16.62■□□□□ 0.25
COPE-205ENST00000595984 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
COPE-205ENST00000595984 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
COPE-205ENST00000595984 FAM196AQ6ZSG2 479 aa16.61■□□□□ 0.25
COPE-205ENST00000595984 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
COPE-205ENST00000595984 EYA1Q99502 592 aa16.61■□□□□ 0.25
COPE-205ENST00000595984 PKD1L3Q7Z443 1732 aa16.61■□□□□ 0.25
COPE-205ENST00000595984 OVOS2A0A0G2JMS6 1433 aa16.61■□□□□ 0.25
COPE-205ENST00000595984 MTHFSP49914 203 aa16.6■□□□□ 0.25
COPE-205ENST00000595984 CCDC125Q86Z20 511 aa16.59■□□□□ 0.25
COPE-205ENST00000595984 KAT6BQ8WYB5 2073 aa16.57■□□□□ 0.24
COPE-205ENST00000595984 NHSQ6T4R5 1651 aa16.56■□□□□ 0.24
COPE-205ENST00000595984 COL3A1P02461 1466 aaPredicted RBP16.56■□□□□ 0.24
COPE-205ENST00000595984 BCL9O00512 1426 aa16.56■□□□□ 0.24
COPE-205ENST00000595984 IGSF1Q8N6C5 1336 aa16.56■□□□□ 0.24
COPE-205ENST00000595984 TRIM37O94972 964 aa16.56■□□□□ 0.24
COPE-205ENST00000595984 TATP17735 454 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms