RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 FAM98CQ17RN3 349 aaKnown RBP28.8■■■□□ 2.2
SH2D3A-204ENST00000595681 COG3Q96JB2 828 aa28.8■■■□□ 2.2
SH2D3A-204ENST00000595681 SPATA31A1Q5TZJ5 1347 aa28.8■■■□□ 2.2
SH2D3A-204ENST00000595681 ONECUT3O60422 494 aaPredicted RBP28.79■■■□□ 2.2
SH2D3A-204ENST00000595681 SEPT12Q8IYM1 358 aa28.78■■■□□ 2.2
SH2D3A-204ENST00000595681 USP35Q9P2H5 1018 aa28.78■■■□□ 2.2
SH2D3A-204ENST00000595681 PANK3Q9H999 370 aa28.78■■■□□ 2.2
SH2D3A-204ENST00000595681 KIF20BQ96Q89 1820 aa28.77■■■□□ 2.2
SH2D3A-204ENST00000595681 EP400Q96L91 3159 aa28.76■■■□□ 2.19
SH2D3A-204ENST00000595681 LTN1O94822 1766 aa28.72■■■□□ 2.19
SH2D3A-204ENST00000595681 RGPD5Q99666 1765 aa28.72■■■□□ 2.19
SH2D3A-204ENST00000595681 A0A0G2JS52 829 aa28.72■■■□□ 2.19
SH2D3A-204ENST00000595681 MYT1Q01538 1121 aa28.72■■■□□ 2.19
SH2D3A-204ENST00000595681 MAP3K19Q56UN5 1328 aa28.71■■■□□ 2.19
SH2D3A-204ENST00000595681 WASHC2AQ641Q2 1341 aa28.71■■■□□ 2.19
SH2D3A-204ENST00000595681 CRB1P82279 1406 aa28.7■■■□□ 2.18
SH2D3A-204ENST00000595681 CCDC7Q96M83 1385 aa28.69■■■□□ 2.18
SH2D3A-204ENST00000595681 WDR17Q8IZU2 1322 aa28.69■■■□□ 2.18
SH2D3A-204ENST00000595681 BRWD3Q6RI45 1802 aa28.69■■■□□ 2.18
SH2D3A-204ENST00000595681 RRS1Q15050 365 aaKnown RBP28.69■■■□□ 2.18
SH2D3A-204ENST00000595681 UPF1Q92900 1129 aaKnown RBP eCLIP28.69■■■□□ 2.18
SH2D3A-204ENST00000595681 CGNL1Q0VF96 1302 aa28.69■■■□□ 2.18
SH2D3A-204ENST00000595681 ABCC6O95255 1503 aa28.68■■■□□ 2.18
SH2D3A-204ENST00000595681 TCP11L2Q8N4U5 519 aa28.68■■■□□ 2.18
SH2D3A-204ENST00000595681 THSD7AQ9UPZ6 1657 aa28.68■■■□□ 2.18
SH2D3A-204ENST00000595681 TOM1L2Q6ZVM7 507 aa28.67■■■□□ 2.18
SH2D3A-204ENST00000595681 CSB-PGBD3P0DP91 1061 aa28.65■■■□□ 2.18
SH2D3A-204ENST00000595681 BARGINQ6ZT62 677 aa28.65■■■□□ 2.18
SH2D3A-204ENST00000595681 IP6K1Q92551 441 aa28.65■■■□□ 2.18
SH2D3A-204ENST00000595681 ERBB3P21860 1342 aa28.64■■■□□ 2.18
SH2D3A-204ENST00000595681 KRT27Q7Z3Y8 459 aa28.64■■■□□ 2.18
SH2D3A-204ENST00000595681 HOXC9P31274 260 aa28.62■■■□□ 2.17
SH2D3A-204ENST00000595681 ANKRD24Q8TF21 1146 aa28.62■■■□□ 2.17
SH2D3A-204ENST00000595681 THRAP3Q9Y2W1 955 aaKnown RBP28.62■■■□□ 2.17
SH2D3A-204ENST00000595681 AMPHP49418 695 aa28.61■■■□□ 2.17
SH2D3A-204ENST00000595681 FAM182BQ5T319 152 aa28.61■■■□□ 2.17
SH2D3A-204ENST00000595681 BLMP54132 1417 aaPredicted RBP28.6■■■□□ 2.17
SH2D3A-204ENST00000595681 LTV1Q96GA3 475 aaPredicted RBP28.6■■■□□ 2.17
SH2D3A-204ENST00000595681 CARD10Q9BWT7 1032 aa28.6■■■□□ 2.17
SH2D3A-204ENST00000595681 ZEB1P37275 1124 aaPredicted RBP28.57■■■□□ 2.16
SH2D3A-204ENST00000595681 EMILIN1Q9Y6C2 1016 aa28.57■■■□□ 2.16
SH2D3A-204ENST00000595681 ANKRD26Q9UPS8 1709 aa28.57■■■□□ 2.16
SH2D3A-204ENST00000595681 TNNT2P45379 298 aaPredicted RBP28.57■■■□□ 2.16
SH2D3A-204ENST00000595681 NLRP2Q9NX02 1062 aa28.57■■■□□ 2.16
SH2D3A-204ENST00000595681 KNSTRNQ9Y448 316 aa28.57■■■□□ 2.16
SH2D3A-204ENST00000595681 PEAK1Q9H792 1746 aa28.56■■■□□ 2.16
SH2D3A-204ENST00000595681 RTL1A6NKG5 1358 aa28.55■■■□□ 2.16
SH2D3A-204ENST00000595681 PER1O15534 1290 aaPredicted RBP28.55■■■□□ 2.16
SH2D3A-204ENST00000595681 AMER1Q5JTC6 1135 aaPredicted RBP28.55■■■□□ 2.16
SH2D3A-204ENST00000595681 HSP90AB2PQ58FF8 381 aa28.54■■■□□ 2.16
SH2D3A-204ENST00000595681 DISP2A7MBM2 1401 aa28.52■■■□□ 2.16
SH2D3A-204ENST00000595681 NSD2O96028 1365 aa28.51■■■□□ 2.16
SH2D3A-204ENST00000595681 PPM1GO15355 546 aaPredicted RBP28.5■■■□□ 2.15
SH2D3A-204ENST00000595681 CNGB1Q14028 1251 aaPredicted RBP28.5■■■□□ 2.15
SH2D3A-204ENST00000595681 POLKQ9UBT6 870 aa28.5■■■□□ 2.15
SH2D3A-204ENST00000595681 FLT4P35916 1363 aa28.5■■■□□ 2.15
SH2D3A-204ENST00000595681 PARP4Q9UKK3 1724 aaKnown RBP28.5■■■□□ 2.15
SH2D3A-204ENST00000595681 MAP2P11137 1827 aaKnown RBP28.5■■■□□ 2.15
SH2D3A-204ENST00000595681 PDE3BQ13370 1112 aa28.49■■■□□ 2.15
SH2D3A-204ENST00000595681 LRRC37A3O60309 1634 aa28.48■■■□□ 2.15
SH2D3A-204ENST00000595681 WNK3Q9BYP7 1800 aa28.48■■■□□ 2.15
SH2D3A-204ENST00000595681 INSRP06213 1382 aa28.48■■■□□ 2.15
SH2D3A-204ENST00000595681 MORC1Q86VD1 984 aa28.47■■■□□ 2.15
SH2D3A-204ENST00000595681 KIF24Q5T7B8 1368 aa28.47■■■□□ 2.15
SH2D3A-204ENST00000595681 DDB1Q16531 1140 aa28.46■■■□□ 2.15
SH2D3A-204ENST00000595681 RGPD2P0DJD1 1756 aa28.45■■■□□ 2.14
SH2D3A-204ENST00000595681 CC2D1BQ5T0F9 858 aaKnown RBP28.45■■■□□ 2.14
SH2D3A-204ENST00000595681 NBPF6Q5VWK0 638 aa28.45■■■□□ 2.14
SH2D3A-204ENST00000595681 NBPF4Q96M43 638 aa28.45■■■□□ 2.14
SH2D3A-204ENST00000595681 CDCA7Q9BWT1 371 aaPredicted RBP28.45■■■□□ 2.14
SH2D3A-204ENST00000595681 USHBP1Q8N6Y0 703 aa28.42■■■□□ 2.14
SH2D3A-204ENST00000595681 IL2RBP14784 551 aa28.42■■■□□ 2.14
SH2D3A-204ENST00000595681 FAM208AQ9UK61 1670 aaKnown RBP28.42■■■□□ 2.14
SH2D3A-204ENST00000595681 MARCH10Q8NA82 808 aaPredicted RBP28.41■■■□□ 2.14
SH2D3A-204ENST00000595681 SMG6Q86US8 1419 aaKnown RBP28.4■■■□□ 2.14
SH2D3A-204ENST00000595681 FAM196AQ6ZSG2 479 aa28.39■■■□□ 2.14
SH2D3A-204ENST00000595681 CCDC125Q86Z20 511 aa28.39■■■□□ 2.14
SH2D3A-204ENST00000595681 EXOC5O00471 708 aa28.38■■■□□ 2.13
SH2D3A-204ENST00000595681 TNS2Q63HR2 1409 aa28.38■■■□□ 2.13
SH2D3A-204ENST00000595681 DEFB132Q7Z7B7 95 aa28.37■■■□□ 2.13
SH2D3A-204ENST00000595681 TRIM37O94972 964 aa28.36■■■□□ 2.13
SH2D3A-204ENST00000595681 MEGF6O75095 1541 aa28.35■■■□□ 2.13
SH2D3A-204ENST00000595681 OVOS2A0A0G2JMS6 1433 aa28.34■■■□□ 2.13
SH2D3A-204ENST00000595681 NPC1L1Q9UHC9 1359 aa28.34■■■□□ 2.13
SH2D3A-204ENST00000595681 EIF4A2Q14240 407 aaKnown RBP28.34■■■□□ 2.13
SH2D3A-204ENST00000595681 SF3B2Q13435 895 aaKnown RBP28.32■■■□□ 2.12
SH2D3A-204ENST00000595681 EYA1Q99502 592 aa28.32■■■□□ 2.12
SH2D3A-204ENST00000595681 PTF1AQ7RTS3 328 aa28.3■■■□□ 2.12
SH2D3A-204ENST00000595681 DDX10Q13206 875 aaKnown RBP28.29■■■□□ 2.12
SH2D3A-204ENST00000595681 TNS1Q9HBL0 1735 aaKnown RBP28.29■■■□□ 2.12
SH2D3A-204ENST00000595681 MTHFSP49914 203 aa28.28■■■□□ 2.12
SH2D3A-204ENST00000595681 NCAPD2Q15021 1401 aa28.28■■■□□ 2.12
SH2D3A-204ENST00000595681 RGPD1P0DJD0 1748 aa28.28■■■□□ 2.12
SH2D3A-204ENST00000595681 DDX54Q8TDD1 881 aaKnown RBP28.27■■■□□ 2.12
SH2D3A-204ENST00000595681 RAPGEF4Q8WZA2 1011 aa28.26■■■□□ 2.11
SH2D3A-204ENST00000595681 BCL9O00512 1426 aa28.25■■■□□ 2.11
SH2D3A-204ENST00000595681 EN1Q05925 392 aaPredicted RBP28.25■■■□□ 2.11
SH2D3A-204ENST00000595681 ZCRB1Q8TBF4 217 aaKnown RBP28.24■■■□□ 2.11
SH2D3A-204ENST00000595681 APBA3O96018 575 aa28.23■■■□□ 2.11
SH2D3A-204ENST00000595681 TATP17735 454 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms