RNA–Protein interactions for RNA: ENST00000594216.1

RAB11B-202, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11B, Length 894 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-202ENST00000594216 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
RAB11B-202ENST00000594216 FYB1O15117 783 aa21.29■■□□□ 1
RAB11B-202ENST00000594216 ONECUT3O60422 494 aaPredicted RBP21.29■■□□□ 1
RAB11B-202ENST00000594216 GGNBP2Q9H3C7 697 aa21.29■■□□□ 1
RAB11B-202ENST00000594216 AXIN2Q9Y2T1 843 aa21.29■■□□□ 1
RAB11B-202ENST00000594216 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
RAB11B-202ENST00000594216 KIF7Q2M1P5 1343 aa21.25■□□□□ 0.99
RAB11B-202ENST00000594216 CRB1P82279 1406 aa21.24■□□□□ 0.99
RAB11B-202ENST00000594216 TOM1L2Q6ZVM7 507 aa21.24■□□□□ 0.99
RAB11B-202ENST00000594216 TCP11L2Q8N4U5 519 aa21.24■□□□□ 0.99
RAB11B-202ENST00000594216 UPF1Q92900 1129 aaKnown RBP eCLIP21.24■□□□□ 0.99
RAB11B-202ENST00000594216 PANK3Q9H999 370 aa21.24■□□□□ 0.99
RAB11B-202ENST00000594216 CGNL1Q0VF96 1302 aa21.24■□□□□ 0.99
RAB11B-202ENST00000594216 ABCC6O95255 1503 aa21.24■□□□□ 0.99
RAB11B-202ENST00000594216 COL18A1P39060 1754 aa21.23■□□□□ 0.99
RAB11B-202ENST00000594216 WDR17Q8IZU2 1322 aa21.23■□□□□ 0.99
RAB11B-202ENST00000594216 KRT27Q7Z3Y8 459 aa21.22■□□□□ 0.99
RAB11B-202ENST00000594216 BARGINQ6ZT62 677 aa21.21■□□□□ 0.99
RAB11B-202ENST00000594216 THRAP3Q9Y2W1 955 aaKnown RBP21.21■□□□□ 0.99
RAB11B-202ENST00000594216 FBLN1P23142 703 aa21.2■□□□□ 0.98
RAB11B-202ENST00000594216 MAP3K19Q56UN5 1328 aa21.2■□□□□ 0.98
RAB11B-202ENST00000594216 AMPHP49418 695 aa21.19■□□□□ 0.98
RAB11B-202ENST00000594216 IP6K1Q92551 441 aa21.19■□□□□ 0.98
RAB11B-202ENST00000594216 KIF20BQ96Q89 1820 aa21.19■□□□□ 0.98
RAB11B-202ENST00000594216 RRS1Q15050 365 aaKnown RBP21.18■□□□□ 0.98
RAB11B-202ENST00000594216 ERBB3P21860 1342 aa21.18■□□□□ 0.98
RAB11B-202ENST00000594216 BLMP54132 1417 aaPredicted RBP21.18■□□□□ 0.98
RAB11B-202ENST00000594216 THSD7AQ9UPZ6 1657 aa21.18■□□□□ 0.98
RAB11B-202ENST00000594216 ANKRD24Q8TF21 1146 aa21.17■□□□□ 0.98
RAB11B-202ENST00000594216 LTN1O94822 1766 aa21.17■□□□□ 0.98
RAB11B-202ENST00000594216 CARD10Q9BWT7 1032 aa21.16■□□□□ 0.98
RAB11B-202ENST00000594216 CCDC7Q96M83 1385 aa21.15■□□□□ 0.98
RAB11B-202ENST00000594216 HOXC9P31274 260 aa21.15■□□□□ 0.98
RAB11B-202ENST00000594216 NLRP2Q9NX02 1062 aa21.15■□□□□ 0.98
RAB11B-202ENST00000594216 KNSTRNQ9Y448 316 aa21.15■□□□□ 0.98
RAB11B-202ENST00000594216 RTL1A6NKG5 1358 aa21.14■□□□□ 0.98
RAB11B-202ENST00000594216 WASHC2AQ641Q2 1341 aa21.14■□□□□ 0.97
RAB11B-202ENST00000594216 BRWD3Q6RI45 1802 aa21.14■□□□□ 0.97
RAB11B-202ENST00000594216 LTV1Q96GA3 475 aaPredicted RBP21.14■□□□□ 0.97
RAB11B-202ENST00000594216 PDE3BQ13370 1112 aa21.13■□□□□ 0.97
RAB11B-202ENST00000594216 RGPD5Q99666 1765 aa21.13■□□□□ 0.97
RAB11B-202ENST00000594216 EP400Q96L91 3159 aa21.12■□□□□ 0.97
RAB11B-202ENST00000594216 FAM182BQ5T319 152 aa21.12■□□□□ 0.97
RAB11B-202ENST00000594216 CDCA7Q9BWT1 371 aaPredicted RBP21.11■□□□□ 0.97
RAB11B-202ENST00000594216 NSD2O96028 1365 aa21.1■□□□□ 0.97
RAB11B-202ENST00000594216 TNNT2P45379 298 aaPredicted RBP21.1■□□□□ 0.97
RAB11B-202ENST00000594216 CCDC125Q86Z20 511 aa21.1■□□□□ 0.97
RAB11B-202ENST00000594216 FLT4P35916 1363 aa21.1■□□□□ 0.97
RAB11B-202ENST00000594216 PPM1GO15355 546 aaPredicted RBP21.09■□□□□ 0.97
RAB11B-202ENST00000594216 EMILIN1Q9Y6C2 1016 aa21.09■□□□□ 0.97
RAB11B-202ENST00000594216 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
RAB11B-202ENST00000594216 DDB1Q16531 1140 aa21.08■□□□□ 0.97
RAB11B-202ENST00000594216 SMG6Q86US8 1419 aaKnown RBP21.07■□□□□ 0.96
RAB11B-202ENST00000594216 SF3B2Q13435 895 aaKnown RBP21.07■□□□□ 0.96
RAB11B-202ENST00000594216 DISP2A7MBM2 1401 aa21.06■□□□□ 0.96
RAB11B-202ENST00000594216 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
RAB11B-202ENST00000594216 FAM196AQ6ZSG2 479 aa21.06■□□□□ 0.96
RAB11B-202ENST00000594216 MORC1Q86VD1 984 aa21.06■□□□□ 0.96
RAB11B-202ENST00000594216 PARP4Q9UKK3 1724 aaKnown RBP21.06■□□□□ 0.96
RAB11B-202ENST00000594216 INSRP06213 1382 aa21.05■□□□□ 0.96
RAB11B-202ENST00000594216 IL2RBP14784 551 aa21.04■□□□□ 0.96
RAB11B-202ENST00000594216 AMER1Q5JTC6 1135 aaPredicted RBP21.04■□□□□ 0.96
RAB11B-202ENST00000594216 POLKQ9UBT6 870 aa21.04■□□□□ 0.96
RAB11B-202ENST00000594216 LRRC37A3O60309 1634 aa21.04■□□□□ 0.96
RAB11B-202ENST00000594216 EXOC5O00471 708 aa21.03■□□□□ 0.96
RAB11B-202ENST00000594216 PER1O15534 1290 aaPredicted RBP21.03■□□□□ 0.96
RAB11B-202ENST00000594216 PEAK1Q9H792 1746 aa21.03■□□□□ 0.96
RAB11B-202ENST00000594216 ANKRD26Q9UPS8 1709 aa21.03■□□□□ 0.96
RAB11B-202ENST00000594216 FAM208AQ9UK61 1670 aaKnown RBP21.02■□□□□ 0.95
RAB11B-202ENST00000594216 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
RAB11B-202ENST00000594216 ZEB1P37275 1124 aaPredicted RBP21■□□□□ 0.95
RAB11B-202ENST00000594216 CC2D1BQ5T0F9 858 aaKnown RBP21■□□□□ 0.95
RAB11B-202ENST00000594216 NBPF6Q5VWK0 638 aa21■□□□□ 0.95
RAB11B-202ENST00000594216 NBPF4Q96M43 638 aa21■□□□□ 0.95
RAB11B-202ENST00000594216 OVOS2A0A0G2JMS6 1433 aa21■□□□□ 0.95
RAB11B-202ENST00000594216 TNS2Q63HR2 1409 aa20.99■□□□□ 0.95
RAB11B-202ENST00000594216 TRIM37O94972 964 aa20.99■□□□□ 0.95
RAB11B-202ENST00000594216 USHBP1Q8N6Y0 703 aa20.99■□□□□ 0.95
RAB11B-202ENST00000594216 MARCH10Q8NA82 808 aaPredicted RBP20.98■□□□□ 0.95
RAB11B-202ENST00000594216 CNGB1Q14028 1251 aaPredicted RBP20.97■□□□□ 0.95
RAB11B-202ENST00000594216 DEFB132Q7Z7B7 95 aa20.97■□□□□ 0.95
RAB11B-202ENST00000594216 BAG6P46379 1132 aa20.96■□□□□ 0.95
RAB11B-202ENST00000594216 RAPGEF4Q8WZA2 1011 aa20.94■□□□□ 0.94
RAB11B-202ENST00000594216 NPC1L1Q9UHC9 1359 aa20.94■□□□□ 0.94
RAB11B-202ENST00000594216 EIF4A2Q14240 407 aaKnown RBP20.93■□□□□ 0.94
RAB11B-202ENST00000594216 MEGF6O75095 1541 aa20.93■□□□□ 0.94
RAB11B-202ENST00000594216 RGPD1P0DJD0 1748 aa20.92■□□□□ 0.94
RAB11B-202ENST00000594216 MAP2P11137 1827 aaKnown RBP20.92■□□□□ 0.94
RAB11B-202ENST00000594216 BCL9O00512 1426 aa20.91■□□□□ 0.94
RAB11B-202ENST00000594216 APBA3O96018 575 aa20.91■□□□□ 0.94
RAB11B-202ENST00000594216 TATP17735 454 aaPredicted RBP20.91■□□□□ 0.94
RAB11B-202ENST00000594216 DDX54Q8TDD1 881 aaKnown RBP20.91■□□□□ 0.94
RAB11B-202ENST00000594216 EYA1Q99502 592 aa20.91■□□□□ 0.94
RAB11B-202ENST00000594216 RGPD2P0DJD1 1756 aa20.9■□□□□ 0.94
RAB11B-202ENST00000594216 EN1Q05925 392 aaPredicted RBP20.9■□□□□ 0.94
RAB11B-202ENST00000594216 ZCRB1Q8TBF4 217 aaKnown RBP20.9■□□□□ 0.94
RAB11B-202ENST00000594216 TNS1Q9HBL0 1735 aaKnown RBP20.88■□□□□ 0.93
RAB11B-202ENST00000594216 MTHFSP49914 203 aa20.88■□□□□ 0.93
RAB11B-202ENST00000594216 BCL11BQ9C0K0 894 aaPredicted RBP20.87■□□□□ 0.93
RAB11B-202ENST00000594216 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms