RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 ZNF710Q8N1W2 664 aa6.25□□□□□ -1.41
LINC00649-204ENST00000593977 TBC1D2BQ9UPU7 963 aa6.25□□□□□ -1.41
LINC00649-204ENST00000593977 ATP10BO94823 1461 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 SENP3-EIF4A1A0A087X0R7 540 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 UNCXA6NJT0 531 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 KDM4AO75164 1064 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 USP17L8P0C7I0 530 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 NDUFV2P19404 249 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 COL9A1P20849 921 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 GPR153Q6NV75 609 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 PACS2Q86VP3 889 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 ZBTB3Q9H5J0 574 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 TSKSQ9UJT2 592 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 NDUFB9Q9Y6M9 179 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 CEP350Q5VT06 3117 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 FAM135BQ49AJ0 1406 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 ERBB3P21860 1342 aa6.24□□□□□ -1.41
LINC00649-204ENST00000593977 VWDEQ8N2E2 1590 aa6.23□□□□□ -1.41
LINC00649-204ENST00000593977 POM121CA8CG34 1229 aa6.23□□□□□ -1.41
LINC00649-204ENST00000593977 TRIM6-TRIM34B2RNG4 842 aa6.23□□□□□ -1.41
LINC00649-204ENST00000593977 PTPREP23469 700 aa6.23□□□□□ -1.41
LINC00649-204ENST00000593977 WASHC4Q2M389 1173 aa6.23□□□□□ -1.41
LINC00649-204ENST00000593977 RTL5Q5HYW3 569 aaPredicted RBP6.23□□□□□ -1.41
LINC00649-204ENST00000593977 KHSRPQ92945 711 aaKnown RBP eCLIP6.23□□□□□ -1.41
LINC00649-204ENST00000593977 TATDN2Q93075 761 aa6.23□□□□□ -1.41
LINC00649-204ENST00000593977 PCDHB15Q9Y5E8 787 aa6.23□□□□□ -1.41
LINC00649-204ENST00000593977 HOXB3P14651 431 aaPredicted RBP6.22□□□□□ -1.41
LINC00649-204ENST00000593977 CCDC27Q2M243 656 aa6.22□□□□□ -1.41
LINC00649-204ENST00000593977 DHX37Q8IY37 1157 aaKnown RBP6.22□□□□□ -1.41
LINC00649-204ENST00000593977 RDH13Q8NBN7 331 aa6.22□□□□□ -1.41
LINC00649-204ENST00000593977 PBXIP1Q96AQ6 731 aa6.22□□□□□ -1.41
LINC00649-204ENST00000593977 ESF1Q9H501 851 aaKnown RBP6.22□□□□□ -1.41
LINC00649-204ENST00000593977 IGSF5Q9NSI5 407 aa6.22□□□□□ -1.41
LINC00649-204ENST00000593977 PNMA3Q9UL41 463 aa6.22□□□□□ -1.41
LINC00649-204ENST00000593977 LHX6Q9UPM6 363 aa6.22□□□□□ -1.41
LINC00649-204ENST00000593977 CARMIL1Q5VZK9 1371 aa6.21□□□□□ -1.41
LINC00649-204ENST00000593977 BRD1O95696 1058 aa6.21□□□□□ -1.42
LINC00649-204ENST00000593977 HOXB1P14653 301 aaPredicted RBP6.21□□□□□ -1.42
LINC00649-204ENST00000593977 CABLES1Q8TDN4 633 aa6.21□□□□□ -1.42
LINC00649-204ENST00000593977 GJD4Q96KN9 370 aaPredicted RBP6.21□□□□□ -1.42
LINC00649-204ENST00000593977 LRP5O75197 1615 aa6.21□□□□□ -1.42
LINC00649-204ENST00000593977 HOXA2O43364 376 aa6.2□□□□□ -1.42
LINC00649-204ENST00000593977 FDX1P10109 184 aa6.2□□□□□ -1.42
LINC00649-204ENST00000593977 GCGRP47871 477 aa6.2□□□□□ -1.42
LINC00649-204ENST00000593977 RNF17Q9BXT8 1623 aaKnown RBP6.2□□□□□ -1.42
LINC00649-204ENST00000593977 AGLP35573 1532 aa6.2□□□□□ -1.42
LINC00649-204ENST00000593977 ZMYM3Q14202 1370 aa6.19□□□□□ -1.42
LINC00649-204ENST00000593977 NEURL4Q96JN8 1562 aa6.19□□□□□ -1.42
LINC00649-204ENST00000593977 SCAPERQ9BY12 1400 aa6.19□□□□□ -1.42
LINC00649-204ENST00000593977 CNTLNQ9NXG0 1405 aa6.19□□□□□ -1.42
LINC00649-204ENST00000593977 C3orf80F5H4A9 247 aa6.19□□□□□ -1.42
LINC00649-204ENST00000593977 HDGFL1Q5TGJ6 251 aa6.19□□□□□ -1.42
LINC00649-204ENST00000593977 CCDC125Q86Z20 511 aa6.19□□□□□ -1.42
LINC00649-204ENST00000593977 HELBQ8NG08 1087 aaPredicted RBP6.19□□□□□ -1.42
LINC00649-204ENST00000593977 USTQ9Y2C2 406 aa6.19□□□□□ -1.42
LINC00649-204ENST00000593977 ZNF142P52746 1687 aaPredicted RBP6.19□□□□□ -1.42
LINC00649-204ENST00000593977 CEP170BQ9Y4F5 1589 aaPredicted RBP6.18□□□□□ -1.42
LINC00649-204ENST00000593977 POLR3GLQ9BT43 218 aa6.18□□□□□ -1.42
LINC00649-204ENST00000593977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.18□□□□□ -1.42
LINC00649-204ENST00000593977 JCADQ9P266 1359 aa6.18□□□□□ -1.42
LINC00649-204ENST00000593977 LRP6O75581 1613 aa6.17□□□□□ -1.42
LINC00649-204ENST00000593977 RGS12O14924 1447 aa6.17□□□□□ -1.42
LINC00649-204ENST00000593977 MTMR2Q13614 643 aa6.17□□□□□ -1.42
LINC00649-204ENST00000593977 SND1Q7KZF4 910 aaKnown RBP eCLIP6.17□□□□□ -1.42
LINC00649-204ENST00000593977 IVNS1ABPQ9Y6Y0 642 aa6.17□□□□□ -1.42
LINC00649-204ENST00000593977 EP400Q96L91 3159 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 CARNS1A5YM72 827 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 PPM1GO15355 546 aaPredicted RBP6.16□□□□□ -1.42
LINC00649-204ENST00000593977 CSB-PGBD3P0DP91 1061 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 BRD2P25440 801 aaKnown RBP6.16□□□□□ -1.42
LINC00649-204ENST00000593977 C1QTNF8P60827 252 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 CTDSPL2Q05D32 466 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 ADAMTS19Q8TE59 1207 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 TRIM34Q9BYJ4 488 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 PLA2G2EQ9NZK7 142 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 PCDHGC3Q9UN70 934 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 ATAD2Q6PL18 1390 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 STRCP1A6NGW2 1772 aa6.16□□□□□ -1.42
LINC00649-204ENST00000593977 CFAP74Q9C0B2 1584 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 REREQ9P2R6 1566 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 MYO3AQ8NEV4 1616 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 RAPGEF6Q8TEU7 1601 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 SMAPO00193 183 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 GPR37L1O60883 481 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 SOX11P35716 441 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 SLC4A3P48751 1232 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 GRIPAP1Q4V328 841 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 VARS2Q5ST30 1063 aaKnown RBP6.15□□□□□ -1.42
LINC00649-204ENST00000593977 CFAP70Q5T0N1 1121 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 PPP1R12CQ9BZL4 782 aa6.15□□□□□ -1.42
LINC00649-204ENST00000593977 HMX1Q9NP08 348 aaPredicted RBP6.15□□□□□ -1.42
LINC00649-204ENST00000593977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.15□□□□□ -1.43
LINC00649-204ENST00000593977 KIF27Q86VH2 1401 aa6.15□□□□□ -1.43
LINC00649-204ENST00000593977 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.14□□□□□ -1.43
LINC00649-204ENST00000593977 RFX1P22670 979 aa6.14□□□□□ -1.43
LINC00649-204ENST00000593977 RBM6P78332 1123 aaKnown RBP6.14□□□□□ -1.43
LINC00649-204ENST00000593977 SRPK2P78362 688 aaKnown RBP6.14□□□□□ -1.43
LINC00649-204ENST00000593977 PROX2Q3B8N5 592 aa6.14□□□□□ -1.43
LINC00649-204ENST00000593977 MEX3CQ5U5Q3 659 aaKnown RBP6.14□□□□□ -1.43
LINC00649-204ENST00000593977 ANKLE2Q86XL3 938 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms