RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 LINC00528Q8N1L1 170 aa7.77□□□□□ -1.17
LINC01539-206ENST00000593282 FAM117AQ9C073 453 aa7.77□□□□□ -1.17
LINC01539-206ENST00000593282 ERBB4Q15303 1308 aa7.77□□□□□ -1.17
LINC01539-206ENST00000593282 GPKOWQ92917 476 aaPredicted RBP eCLIP7.76□□□□□ -1.17
LINC01539-206ENST00000593282 SH3BP5LQ7L8J4 393 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 SH3RF1Q7Z6J0 888 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 CCDC116Q8IYX3 515 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 MEIOBQ8N635 442 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 MAP4K5Q9Y4K4 846 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 EMILIN1Q9Y6C2 1016 aa7.75□□□□□ -1.17
LINC01539-206ENST00000593282 TRMT44Q8IYL2 757 aaKnown RBP7.74□□□□□ -1.17
LINC01539-206ENST00000593282 CTDSPL2Q05D32 466 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 SLC10A4Q96EP9 437 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 ARHGAP9Q9BRR9 750 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
LINC01539-206ENST00000593282 ZMYND15Q9H091 742 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
LINC01539-206ENST00000593282 ERFEQ4G0M1 354 aa7.72□□□□□ -1.17
LINC01539-206ENST00000593282 ZBTB33Q86T24 672 aa7.72□□□□□ -1.17
LINC01539-206ENST00000593282 PPFIA3O75145 1194 aa7.7□□□□□ -1.18
LINC01539-206ENST00000593282 LRRN4Q8WUT4 740 aa7.7□□□□□ -1.18
LINC01539-206ENST00000593282 FKBPLQ9UIM3 349 aa7.7□□□□□ -1.18
LINC01539-206ENST00000593282 CDV3Q9UKY7 258 aaKnown RBP7.7□□□□□ -1.18
LINC01539-206ENST00000593282 SOS2Q07890 1332 aaPredicted RBP7.7□□□□□ -1.18
LINC01539-206ENST00000593282 TTLL8A6PVC2 850 aa7.69□□□□□ -1.18
LINC01539-206ENST00000593282 VSIG8P0DPA2 414 aa7.69□□□□□ -1.18
LINC01539-206ENST00000593282 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.69□□□□□ -1.18
LINC01539-206ENST00000593282 PPP1R26Q5T8A7 1209 aaPredicted RBP7.69□□□□□ -1.18
LINC01539-206ENST00000593282 PDXDC2PQ6P474 469 aa7.69□□□□□ -1.18
LINC01539-206ENST00000593282 DNMT3LQ9UJW3 386 aa7.69□□□□□ -1.18
LINC01539-206ENST00000593282 DHX9Q08211 1270 aaKnown RBP7.68□□□□□ -1.18
LINC01539-206ENST00000593282 NR6A1Q15406 480 aa7.68□□□□□ -1.18
LINC01539-206ENST00000593282 SKIV2LQ15477 1246 aaKnown RBP7.68□□□□□ -1.18
LINC01539-206ENST00000593282 PNMA1Q8ND90 353 aa7.68□□□□□ -1.18
LINC01539-206ENST00000593282 DDRGK1Q96HY6 314 aa7.68□□□□□ -1.18
LINC01539-206ENST00000593282 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
LINC01539-206ENST00000593282 AP1G2O75843 785 aa7.67□□□□□ -1.18
LINC01539-206ENST00000593282 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
LINC01539-206ENST00000593282 PTK2Q05397 1052 aa7.67□□□□□ -1.18
LINC01539-206ENST00000593282 CBLBQ13191 982 aa7.67□□□□□ -1.18
LINC01539-206ENST00000593282 SH3D19Q5HYK7 790 aa7.67□□□□□ -1.18
LINC01539-206ENST00000593282 ZC3H4Q9UPT8 1303 aaKnown RBP7.67□□□□□ -1.18
LINC01539-206ENST00000593282 FIGNL2A6NMB9 653 aa7.66□□□□□ -1.18
LINC01539-206ENST00000593282 PROCA1Q8NCQ7 364 aaPredicted RBP7.65□□□□□ -1.18
LINC01539-206ENST00000593282 RAB15P59190 212 aa7.64□□□□□ -1.19
LINC01539-206ENST00000593282 PTSQ03393 145 aa7.64□□□□□ -1.19
LINC01539-206ENST00000593282 RELBQ01201 579 aa7.63□□□□□ -1.19
LINC01539-206ENST00000593282 NBPF20Q3BBV1 942 aa7.63□□□□□ -1.19
LINC01539-206ENST00000593282 INTS6LQ5JSJ4 861 aaKnown RBP7.63□□□□□ -1.19
LINC01539-206ENST00000593282 Q6ZVU0 165 aa7.63□□□□□ -1.19
LINC01539-206ENST00000593282 SPINT1O43278 529 aa7.62□□□□□ -1.19
LINC01539-206ENST00000593282 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
LINC01539-206ENST00000593282 ADAM32Q8TC27 787 aa7.62□□□□□ -1.19
LINC01539-206ENST00000593282 AGBL1Q96MI9 1066 aa7.62□□□□□ -1.19
LINC01539-206ENST00000593282 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.62□□□□□ -1.19
LINC01539-206ENST00000593282 POLMQ9NP87 494 aaPredicted RBP7.62□□□□□ -1.19
LINC01539-206ENST00000593282 PPP2R2DQ66LE6 453 aa7.61□□□□□ -1.19
LINC01539-206ENST00000593282 CNTNAP3BQ96NU0 1288 aa7.61□□□□□ -1.19
LINC01539-206ENST00000593282 CNTNAP3Q9BZ76 1288 aa7.61□□□□□ -1.19
LINC01539-206ENST00000593282 GPSM3Q9Y4H4 160 aa7.61□□□□□ -1.19
LINC01539-206ENST00000593282 CDC14CA4D256 554 aa7.6□□□□□ -1.19
LINC01539-206ENST00000593282 USP17L8P0C7I0 530 aa7.6□□□□□ -1.19
LINC01539-206ENST00000593282 FBXO31Q5XUX0 539 aaPredicted RBP7.6□□□□□ -1.19
LINC01539-206ENST00000593282 CCDC155Q8N6L0 562 aa7.6□□□□□ -1.19
LINC01539-206ENST00000593282 INSM2Q96T92 566 aaPredicted RBP7.59□□□□□ -1.19
LINC01539-206ENST00000593282 C1orf115Q9H7X2 142 aa7.59□□□□□ -1.19
LINC01539-206ENST00000593282 CTSOP43234 321 aaPredicted RBP7.58□□□□□ -1.2
LINC01539-206ENST00000593282 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
LINC01539-206ENST00000593282 ZNF395Q9H8N7 513 aaPredicted RBP7.58□□□□□ -1.2
LINC01539-206ENST00000593282 TMPRSS4Q9NRS4 437 aa7.58□□□□□ -1.2
LINC01539-206ENST00000593282 GPR161Q8N6U8 529 aaKnown RBP7.57□□□□□ -1.2
LINC01539-206ENST00000593282 ZNF784Q8NCA9 323 aaPredicted RBP7.57□□□□□ -1.2
LINC01539-206ENST00000593282 TRIM52Q96A61 297 aa7.57□□□□□ -1.2
LINC01539-206ENST00000593282 OCSTAMPQ9BR26 566 aa7.57□□□□□ -1.2
LINC01539-206ENST00000593282 COL25A1Q9BXS0 654 aaPredicted RBP7.57□□□□□ -1.2
LINC01539-206ENST00000593282 GOPCQ9HD26 462 aa7.57□□□□□ -1.2
LINC01539-206ENST00000593282 HMX1Q9NP08 348 aaPredicted RBP7.57□□□□□ -1.2
LINC01539-206ENST00000593282 ADH1AP07327 375 aa7.56□□□□□ -1.2
LINC01539-206ENST00000593282 ITGA6P23229 1130 aa7.56□□□□□ -1.2
LINC01539-206ENST00000593282 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
LINC01539-206ENST00000593282 ARID3AQ99856 593 aa7.56□□□□□ -1.2
LINC01539-206ENST00000593282 SLC35F4A4IF30 521 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 ERVH48-1M5A8F1 160 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 RFC5P40937 340 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 KRT76Q01546 638 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 SV2AQ7L0J3 742 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
LINC01539-206ENST00000593282 RNF225M0QZC1 329 aaPredicted RBP7.54□□□□□ -1.2
LINC01539-206ENST00000593282 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
LINC01539-206ENST00000593282 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
LINC01539-206ENST00000593282 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
LINC01539-206ENST00000593282 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
LINC01539-206ENST00000593282 ZBTB7CA1YPR0 619 aa7.53□□□□□ -1.2
LINC01539-206ENST00000593282 CYLDQ9NQC7 956 aa7.53□□□□□ -1.2
LINC01539-206ENST00000593282 PTGIRP43119 386 aa7.52□□□□□ -1.21
LINC01539-206ENST00000593282 PCDHB9Q9Y5E1 797 aa7.52□□□□□ -1.21
LINC01539-206ENST00000593282 KCNMA1Q12791 1236 aa7.51□□□□□ -1.21
LINC01539-206ENST00000593282 RNFT1Q5M7Z0 435 aa7.51□□□□□ -1.21
LINC01539-206ENST00000593282 LYSMD3Q7Z3D4 306 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms