RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GCP02774 474 aa18.87■□□□□ 0.61
H3F3B-213ENST00000593254 CRB1P82279 1406 aa18.87■□□□□ 0.61
H3F3B-213ENST00000593254 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
H3F3B-213ENST00000593254 EVC2Q86UK5 1308 aa18.84■□□□□ 0.61
H3F3B-213ENST00000593254 NLRP13Q86W25 1043 aa18.84■□□□□ 0.61
H3F3B-213ENST00000593254 PDGFDQ9GZP0 370 aaPredicted RBP18.84■□□□□ 0.61
H3F3B-213ENST00000593254 MYOM1P52179 1685 aa18.84■□□□□ 0.61
H3F3B-213ENST00000593254 PTGER2P43116 358 aa18.83■□□□□ 0.6
H3F3B-213ENST00000593254 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.6
H3F3B-213ENST00000593254 PROM2Q8N271 834 aa18.83■□□□□ 0.6
H3F3B-213ENST00000593254 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.6
H3F3B-213ENST00000593254 WNK3Q9BYP7 1800 aa18.83■□□□□ 0.6
H3F3B-213ENST00000593254 GOLGB1Q14789 3259 aaKnown RBP18.83■□□□□ 0.6
H3F3B-213ENST00000593254 BCL9O00512 1426 aa18.83■□□□□ 0.6
H3F3B-213ENST00000593254 BRD4O60885 1362 aaPredicted RBP18.82■□□□□ 0.6
H3F3B-213ENST00000593254 ZNF784Q8NCA9 323 aaPredicted RBP18.82■□□□□ 0.6
H3F3B-213ENST00000593254 AATKQ6ZMQ8 1374 aa18.81■□□□□ 0.6
H3F3B-213ENST00000593254 COL18A1P39060 1754 aa18.81■□□□□ 0.6
H3F3B-213ENST00000593254 DDB1Q16531 1140 aa18.81■□□□□ 0.6
H3F3B-213ENST00000593254 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
H3F3B-213ENST00000593254 USP6P35125 1406 aa18.81■□□□□ 0.6
H3F3B-213ENST00000593254 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
H3F3B-213ENST00000593254 CHD4Q14839 1912 aa18.8■□□□□ 0.6
H3F3B-213ENST00000593254 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
H3F3B-213ENST00000593254 SLIT3O75094 1523 aa18.79■□□□□ 0.6
H3F3B-213ENST00000593254 ZBTB7AO95365 584 aa18.79■□□□□ 0.6
H3F3B-213ENST00000593254 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
H3F3B-213ENST00000593254 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
H3F3B-213ENST00000593254 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
H3F3B-213ENST00000593254 CEP350Q5VT06 3117 aa18.76■□□□□ 0.59
H3F3B-213ENST00000593254 TOM1L2Q6ZVM7 507 aa18.75■□□□□ 0.59
H3F3B-213ENST00000593254 SYT17Q9BSW7 474 aa18.75■□□□□ 0.59
H3F3B-213ENST00000593254 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
H3F3B-213ENST00000593254 SGIP1Q9BQI5 828 aa18.74■□□□□ 0.59
H3F3B-213ENST00000593254 CDCA7Q9BWT1 371 aaPredicted RBP18.74■□□□□ 0.59
H3F3B-213ENST00000593254 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
H3F3B-213ENST00000593254 AXIN2Q9Y2T1 843 aa18.74■□□□□ 0.59
H3F3B-213ENST00000593254 NLRP6P59044 892 aa18.73■□□□□ 0.59
H3F3B-213ENST00000593254 SLC15A2Q16348 729 aa18.73■□□□□ 0.59
H3F3B-213ENST00000593254 FHDC1Q9C0D6 1143 aaPredicted RBP18.73■□□□□ 0.59
H3F3B-213ENST00000593254 MON2Q7Z3U7 1717 aa18.73■□□□□ 0.59
H3F3B-213ENST00000593254 CPSF1Q10570 1443 aaKnown RBP18.73■□□□□ 0.59
H3F3B-213ENST00000593254 RGPD5Q99666 1765 aa18.73■□□□□ 0.59
H3F3B-213ENST00000593254 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
H3F3B-213ENST00000593254 TXNRD1Q16881 649 aa18.72■□□□□ 0.59
H3F3B-213ENST00000593254 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
H3F3B-213ENST00000593254 STK32BQ9NY57 414 aa18.72■□□□□ 0.59
H3F3B-213ENST00000593254 MTFR1LQ9H019 292 aa18.71■□□□□ 0.59
H3F3B-213ENST00000593254 TTC21BQ7Z4L5 1316 aa18.7■□□□□ 0.58
H3F3B-213ENST00000593254 CARD10Q9BWT7 1032 aa18.69■□□□□ 0.58
H3F3B-213ENST00000593254 C1QTNF8P60827 252 aa18.68■□□□□ 0.58
H3F3B-213ENST00000593254 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
H3F3B-213ENST00000593254 TTC21AQ8NDW8 1320 aa18.68■□□□□ 0.58
H3F3B-213ENST00000593254 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
H3F3B-213ENST00000593254 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
H3F3B-213ENST00000593254 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
H3F3B-213ENST00000593254 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
H3F3B-213ENST00000593254 CD163L1Q9NR16 1453 aa18.67■□□□□ 0.58
H3F3B-213ENST00000593254 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
H3F3B-213ENST00000593254 USP54Q70EL1 1684 aa18.66■□□□□ 0.58
H3F3B-213ENST00000593254 EXOC5O00471 708 aa18.65■□□□□ 0.58
H3F3B-213ENST00000593254 TNS2Q63HR2 1409 aa18.65■□□□□ 0.58
H3F3B-213ENST00000593254 PUS7Q96PZ0 661 aaKnown RBP18.64■□□□□ 0.57
H3F3B-213ENST00000593254 TESK2Q96S53 571 aa18.64■□□□□ 0.57
H3F3B-213ENST00000593254 NFAT5O94916 1531 aa18.64■□□□□ 0.57
H3F3B-213ENST00000593254 KCNH5Q8NCM2 988 aa18.63■□□□□ 0.57
H3F3B-213ENST00000593254 ARXQ96QS3 562 aa18.63■□□□□ 0.57
H3F3B-213ENST00000593254 CCDC7Q96M83 1385 aa18.63■□□□□ 0.57
H3F3B-213ENST00000593254 ABCC6O95255 1503 aa18.63■□□□□ 0.57
H3F3B-213ENST00000593254 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
H3F3B-213ENST00000593254 CLSPNQ9HAW4 1339 aa18.61■□□□□ 0.57
H3F3B-213ENST00000593254 TMC1Q8TDI8 760 aa18.61■□□□□ 0.57
H3F3B-213ENST00000593254 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
H3F3B-213ENST00000593254 BTAF1O14981 1849 aa18.6■□□□□ 0.57
H3F3B-213ENST00000593254 USP31Q70CQ4 1352 aa18.6■□□□□ 0.57
H3F3B-213ENST00000593254 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
H3F3B-213ENST00000593254 COL24A1Q17RW2 1714 aa18.6■□□□□ 0.57
H3F3B-213ENST00000593254 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
H3F3B-213ENST00000593254 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
H3F3B-213ENST00000593254 A0A1W2PP64 1363 aa18.59■□□□□ 0.57
H3F3B-213ENST00000593254 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
H3F3B-213ENST00000593254 HDGFL2Q7Z4V5 671 aaPredicted RBP18.59■□□□□ 0.57
H3F3B-213ENST00000593254 QSER1Q2KHR3 1735 aa18.58■□□□□ 0.57
H3F3B-213ENST00000593254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.58■□□□□ 0.56
H3F3B-213ENST00000593254 TIMELESSQ9UNS1 1208 aa18.58■□□□□ 0.56
H3F3B-213ENST00000593254 USP47Q96K76 1375 aa18.57■□□□□ 0.56
H3F3B-213ENST00000593254 ZNF827Q17R98 1081 aa18.57■□□□□ 0.56
H3F3B-213ENST00000593254 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
H3F3B-213ENST00000593254 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
H3F3B-213ENST00000593254 LTN1O94822 1766 aa18.56■□□□□ 0.56
H3F3B-213ENST00000593254 SOX12O15370 315 aa18.56■□□□□ 0.56
H3F3B-213ENST00000593254 NME9Q86XW9 330 aa18.56■□□□□ 0.56
H3F3B-213ENST00000593254 PCGF6Q9BYE7 350 aa18.56■□□□□ 0.56
H3F3B-213ENST00000593254 LRRC4BQ9NT99 713 aa18.56■□□□□ 0.56
H3F3B-213ENST00000593254 IFFO2Q5TF58 517 aa18.55■□□□□ 0.56
H3F3B-213ENST00000593254 GPR162Q16538 588 aa18.54■□□□□ 0.56
H3F3B-213ENST00000593254 ERBB3P21860 1342 aa18.53■□□□□ 0.56
H3F3B-213ENST00000593254 GIGYF1O75420 1035 aaPredicted RBP18.53■□□□□ 0.56
H3F3B-213ENST00000593254 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
H3F3B-213ENST00000593254 SHANK3Q9BYB0 1731 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms