RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 USP19O94966 1318 aa17.84■□□□□ 0.45
GFAP-221ENST00000592065 A0A0G2JS52 829 aa17.84■□□□□ 0.45
GFAP-221ENST00000592065 FAM182BQ5T319 152 aa17.82■□□□□ 0.44
GFAP-221ENST00000592065 NRAPQ86VF7 1730 aa17.82■□□□□ 0.44
GFAP-221ENST00000592065 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
GFAP-221ENST00000592065 HDGFL2Q7Z4V5 671 aaPredicted RBP17.82■□□□□ 0.44
GFAP-221ENST00000592065 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
GFAP-221ENST00000592065 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
GFAP-221ENST00000592065 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
GFAP-221ENST00000592065 AXIN2Q9Y2T1 843 aa17.81■□□□□ 0.44
GFAP-221ENST00000592065 COL14A1Q05707 1796 aaKnown RBP17.81■□□□□ 0.44
GFAP-221ENST00000592065 MYOM1P52179 1685 aa17.8■□□□□ 0.44
GFAP-221ENST00000592065 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
GFAP-221ENST00000592065 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
GFAP-221ENST00000592065 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
GFAP-221ENST00000592065 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.79■□□□□ 0.44
GFAP-221ENST00000592065 RALBP1Q15311 655 aa17.79■□□□□ 0.44
GFAP-221ENST00000592065 MYBBP1AQ9BQG0 1328 aaKnown RBP17.79■□□□□ 0.44
GFAP-221ENST00000592065 NWD2Q9ULI1 1742 aa17.79■□□□□ 0.44
GFAP-221ENST00000592065 GGNBP2Q9H3C7 697 aa17.78■□□□□ 0.44
GFAP-221ENST00000592065 VPS72Q15906 364 aa17.78■□□□□ 0.44
GFAP-221ENST00000592065 CARD14Q9BXL6 1004 aa17.77■□□□□ 0.44
GFAP-221ENST00000592065 SLIT3O75094 1523 aa17.77■□□□□ 0.44
GFAP-221ENST00000592065 CCDC136Q96JN2 1154 aa17.77■□□□□ 0.44
GFAP-221ENST00000592065 RGPD5Q99666 1765 aa17.77■□□□□ 0.44
GFAP-221ENST00000592065 EDC4Q6P2E9 1401 aaKnown RBP17.76■□□□□ 0.43
GFAP-221ENST00000592065 SEPT12Q8IYM1 358 aa17.76■□□□□ 0.43
GFAP-221ENST00000592065 BRWD3Q6RI45 1802 aa17.76■□□□□ 0.43
GFAP-221ENST00000592065 TTC21AQ8NDW8 1320 aa17.76■□□□□ 0.43
GFAP-221ENST00000592065 EVA1CP58658 441 aa17.76■□□□□ 0.43
GFAP-221ENST00000592065 ANKRD36BQ8N2N9 1353 aa17.76■□□□□ 0.43
GFAP-221ENST00000592065 LMO7Q8WWI1 1683 aa17.75■□□□□ 0.43
GFAP-221ENST00000592065 NFAT5O94916 1531 aa17.74■□□□□ 0.43
GFAP-221ENST00000592065 UPF1Q92900 1129 aaKnown RBP eCLIP17.73■□□□□ 0.43
GFAP-221ENST00000592065 CPDO75976 1380 aa17.73■□□□□ 0.43
GFAP-221ENST00000592065 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
GFAP-221ENST00000592065 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
GFAP-221ENST00000592065 COL5A2P05997 1499 aaPredicted RBP17.73■□□□□ 0.43
GFAP-221ENST00000592065 ARHGEF25Q86VW2 580 aa17.73■□□□□ 0.43
GFAP-221ENST00000592065 CDK12Q9NYV4 1490 aaPredicted RBP17.73■□□□□ 0.43
GFAP-221ENST00000592065 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
GFAP-221ENST00000592065 PARD3Q8TEW0 1356 aa17.72■□□□□ 0.43
GFAP-221ENST00000592065 OVOS2A0A0J9YW53 1432 aa17.72■□□□□ 0.43
GFAP-221ENST00000592065 OVOS2Q6IE36 1432 aa17.72■□□□□ 0.43
GFAP-221ENST00000592065 FYB1O15117 783 aa17.72■□□□□ 0.43
GFAP-221ENST00000592065 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
GFAP-221ENST00000592065 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
GFAP-221ENST00000592065 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.43
GFAP-221ENST00000592065 LTN1O94822 1766 aa17.71■□□□□ 0.43
GFAP-221ENST00000592065 COL18A1P39060 1754 aa17.7■□□□□ 0.42
GFAP-221ENST00000592065 LTV1Q96GA3 475 aaPredicted RBP17.7■□□□□ 0.42
GFAP-221ENST00000592065 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
GFAP-221ENST00000592065 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
GFAP-221ENST00000592065 NINLQ9Y2I6 1382 aa17.69■□□□□ 0.42
GFAP-221ENST00000592065 CDCA8Q53HL2 280 aa17.69■□□□□ 0.42
GFAP-221ENST00000592065 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
GFAP-221ENST00000592065 USP31Q70CQ4 1352 aa17.68■□□□□ 0.42
GFAP-221ENST00000592065 SENP3-EIF4A1A0A087X0R7 540 aa17.68■□□□□ 0.42
GFAP-221ENST00000592065 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
GFAP-221ENST00000592065 KCNH5Q8NCM2 988 aa17.68■□□□□ 0.42
GFAP-221ENST00000592065 COG3Q96JB2 828 aa17.68■□□□□ 0.42
GFAP-221ENST00000592065 AATKQ6ZMQ8 1374 aa17.68■□□□□ 0.42
GFAP-221ENST00000592065 PANK3Q9H999 370 aa17.67■□□□□ 0.42
GFAP-221ENST00000592065 RRP1P56182 461 aaKnown RBP17.67■□□□□ 0.42
GFAP-221ENST00000592065 PER1O15534 1290 aaPredicted RBP17.66■□□□□ 0.42
GFAP-221ENST00000592065 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
GFAP-221ENST00000592065 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
GFAP-221ENST00000592065 KRT27Q7Z3Y8 459 aa17.65■□□□□ 0.42
GFAP-221ENST00000592065 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
GFAP-221ENST00000592065 INSRP06213 1382 aa17.65■□□□□ 0.42
GFAP-221ENST00000592065 ONECUT3O60422 494 aaPredicted RBP17.64■□□□□ 0.41
GFAP-221ENST00000592065 KIF20BQ96Q89 1820 aa17.64■□□□□ 0.41
GFAP-221ENST00000592065 PPM1GO15355 546 aaPredicted RBP17.63■□□□□ 0.41
GFAP-221ENST00000592065 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
GFAP-221ENST00000592065 USP54Q70EL1 1684 aa17.63■□□□□ 0.41
GFAP-221ENST00000592065 CRB1P82279 1406 aa17.63■□□□□ 0.41
GFAP-221ENST00000592065 WDR17Q8IZU2 1322 aa17.63■□□□□ 0.41
GFAP-221ENST00000592065 RCAN3Q9UKA8 241 aa17.63■□□□□ 0.41
GFAP-221ENST00000592065 EMILIN1Q9Y6C2 1016 aa17.63■□□□□ 0.41
GFAP-221ENST00000592065 THSD7AQ9UPZ6 1657 aa17.62■□□□□ 0.41
GFAP-221ENST00000592065 ERBB3P21860 1342 aa17.62■□□□□ 0.41
GFAP-221ENST00000592065 DEFB132Q7Z7B7 95 aa17.62■□□□□ 0.41
GFAP-221ENST00000592065 IPO9Q96P70 1041 aaKnown RBP17.62■□□□□ 0.41
GFAP-221ENST00000592065 NLRP2Q9NX02 1062 aa17.62■□□□□ 0.41
GFAP-221ENST00000592065 ANP32AP39687 249 aaKnown RBP17.61■□□□□ 0.41
GFAP-221ENST00000592065 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
GFAP-221ENST00000592065 AMPHP49418 695 aa17.6■□□□□ 0.41
GFAP-221ENST00000592065 USHBP1Q8N6Y0 703 aa17.6■□□□□ 0.41
GFAP-221ENST00000592065 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
GFAP-221ENST00000592065 HOXC9P31274 260 aa17.59■□□□□ 0.41
GFAP-221ENST00000592065 HSP90AB2PQ58FF8 381 aa17.59■□□□□ 0.41
GFAP-221ENST00000592065 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
GFAP-221ENST00000592065 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
GFAP-221ENST00000592065 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
GFAP-221ENST00000592065 ANO8Q9HCE9 1232 aaPredicted RBP17.58■□□□□ 0.4
GFAP-221ENST00000592065 CGNL1Q0VF96 1302 aa17.57■□□□□ 0.4
GFAP-221ENST00000592065 PTF1AQ7RTS3 328 aa17.57■□□□□ 0.4
GFAP-221ENST00000592065 IP6K1Q92551 441 aa17.56■□□□□ 0.4
GFAP-221ENST00000592065 BARGINQ6ZT62 677 aa17.56■□□□□ 0.4
GFAP-221ENST00000592065 TCERG1O14776 1098 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms