RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 STRN4Q9NRL3 753 aa24.8■■□□□ 1.56
CROCCP3-205ENST00000591316 USP21Q9UK80 565 aa24.78■■□□□ 1.56
CROCCP3-205ENST00000591316 AFF2P51816 1311 aa24.78■■□□□ 1.56
CROCCP3-205ENST00000591316 FNBP4Q8N3X1 1017 aaPredicted RBP24.77■■□□□ 1.56
CROCCP3-205ENST00000591316 MAP2P11137 1827 aaKnown RBP24.76■■□□□ 1.55
CROCCP3-205ENST00000591316 CSB-PGBD3P0DP91 1061 aa24.75■■□□□ 1.55
CROCCP3-205ENST00000591316 PHF23Q9BUL5 403 aaPredicted RBP24.75■■□□□ 1.55
CROCCP3-205ENST00000591316 UNC5CLQ8IV45 518 aa24.74■■□□□ 1.55
CROCCP3-205ENST00000591316 FLT4P35916 1363 aa24.73■■□□□ 1.55
CROCCP3-205ENST00000591316 ANKRD24Q8TF21 1146 aa24.73■■□□□ 1.55
CROCCP3-205ENST00000591316 LTN1O94822 1766 aa24.73■■□□□ 1.55
CROCCP3-205ENST00000591316 CAMTA1Q9Y6Y1 1673 aa24.73■■□□□ 1.55
CROCCP3-205ENST00000591316 MYBBP1AQ9BQG0 1328 aaKnown RBP24.72■■□□□ 1.55
CROCCP3-205ENST00000591316 CCDC9Q9Y3X0 531 aaKnown RBP24.72■■□□□ 1.55
CROCCP3-205ENST00000591316 COL14A1Q05707 1796 aaKnown RBP24.71■■□□□ 1.55
CROCCP3-205ENST00000591316 LARP1Q6PKG0 1096 aaKnown RBP24.71■■□□□ 1.55
CROCCP3-205ENST00000591316 SLIT2O94813 1529 aa24.7■■□□□ 1.55
CROCCP3-205ENST00000591316 USP35Q9P2H5 1018 aa24.7■■□□□ 1.54
CROCCP3-205ENST00000591316 RTL1A6NKG5 1358 aa24.7■■□□□ 1.54
CROCCP3-205ENST00000591316 KIF24Q5T7B8 1368 aa24.7■■□□□ 1.54
CROCCP3-205ENST00000591316 TOM1L2Q6ZVM7 507 aa24.69■■□□□ 1.54
CROCCP3-205ENST00000591316 QTRT2Q9H974 415 aaKnown RBP24.69■■□□□ 1.54
CROCCP3-205ENST00000591316 INSRP06213 1382 aa24.69■■□□□ 1.54
CROCCP3-205ENST00000591316 PEAK1Q9H792 1746 aa24.69■■□□□ 1.54
CROCCP3-205ENST00000591316 BCL9LQ86UU0 1499 aa24.69■■□□□ 1.54
CROCCP3-205ENST00000591316 COL18A1P39060 1754 aa24.68■■□□□ 1.54
CROCCP3-205ENST00000591316 CFAP53Q96M91 514 aa24.68■■□□□ 1.54
CROCCP3-205ENST00000591316 EIF4A2Q14240 407 aaKnown RBP24.67■■□□□ 1.54
CROCCP3-205ENST00000591316 ZNF772Q68DY9 489 aaPredicted RBP24.67■■□□□ 1.54
CROCCP3-205ENST00000591316 NLRP2Q9NX02 1062 aa24.67■■□□□ 1.54
CROCCP3-205ENST00000591316 ERBB3P21860 1342 aa24.67■■□□□ 1.54
CROCCP3-205ENST00000591316 BLMP54132 1417 aaPredicted RBP24.67■■□□□ 1.54
CROCCP3-205ENST00000591316 RGS17Q9UGC6 210 aaPredicted RBP24.67■■□□□ 1.54
CROCCP3-205ENST00000591316 RGPD5Q99666 1765 aa24.66■■□□□ 1.54
CROCCP3-205ENST00000591316 COL5A2P05997 1499 aaPredicted RBP24.66■■□□□ 1.54
CROCCP3-205ENST00000591316 DIAPH1O60610 1272 aaKnown RBP24.66■■□□□ 1.54
CROCCP3-205ENST00000591316 SMG6Q86US8 1419 aaKnown RBP24.65■■□□□ 1.54
CROCCP3-205ENST00000591316 LMO7Q8WWI1 1683 aa24.65■■□□□ 1.54
CROCCP3-205ENST00000591316 WDR17Q8IZU2 1322 aa24.65■■□□□ 1.54
CROCCP3-205ENST00000591316 PLCH1Q4KWH8 1693 aa24.64■■□□□ 1.54
CROCCP3-205ENST00000591316 TRPC5Q9UL62 973 aaPredicted RBP24.64■■□□□ 1.54
CROCCP3-205ENST00000591316 VPS72Q15906 364 aa24.63■■□□□ 1.53
CROCCP3-205ENST00000591316 IL13P35225 146 aa24.63■■□□□ 1.53
CROCCP3-205ENST00000591316 CCDC184Q52MB2 194 aa24.63■■□□□ 1.53
CROCCP3-205ENST00000591316 NBPF6Q5VWK0 638 aa24.63■■□□□ 1.53
CROCCP3-205ENST00000591316 NBPF4Q96M43 638 aa24.63■■□□□ 1.53
CROCCP3-205ENST00000591316 CDK12Q9NYV4 1490 aaPredicted RBP24.62■■□□□ 1.53
CROCCP3-205ENST00000591316 MIER1Q8N108 512 aa24.62■■□□□ 1.53
CROCCP3-205ENST00000591316 USHBP1Q8N6Y0 703 aa24.62■■□□□ 1.53
CROCCP3-205ENST00000591316 U2SURPO15042 1029 aaKnown RBP24.61■■□□□ 1.53
CROCCP3-205ENST00000591316 EYA1Q99502 592 aa24.61■■□□□ 1.53
CROCCP3-205ENST00000591316 GJD4Q96KN9 370 aaPredicted RBP24.6■■□□□ 1.53
CROCCP3-205ENST00000591316 ABCC6O95255 1503 aa24.6■■□□□ 1.53
CROCCP3-205ENST00000591316 NWD2Q9ULI1 1742 aa24.59■■□□□ 1.53
CROCCP3-205ENST00000591316 POTEAQ6S8J7 498 aa24.59■■□□□ 1.53
CROCCP3-205ENST00000591316 CARD10Q9BWT7 1032 aa24.59■■□□□ 1.53
CROCCP3-205ENST00000591316 SPATA31A5Q5VU36 1347 aa24.58■■□□□ 1.53
CROCCP3-205ENST00000591316 SPATA31A7Q8IWB4 1347 aa24.58■■□□□ 1.53
CROCCP3-205ENST00000591316 NUDCQ9Y266 331 aa24.58■■□□□ 1.52
CROCCP3-205ENST00000591316 SPATA31A1Q5TZJ5 1347 aa24.58■■□□□ 1.52
CROCCP3-205ENST00000591316 CRB1P82279 1406 aa24.58■■□□□ 1.52
CROCCP3-205ENST00000591316 MRS2Q9HD23 443 aa24.57■■□□□ 1.52
CROCCP3-205ENST00000591316 TCP11L2Q8N4U5 519 aa24.56■■□□□ 1.52
CROCCP3-205ENST00000591316 NRAPQ86VF7 1730 aa24.56■■□□□ 1.52
CROCCP3-205ENST00000591316 ATRNO75882 1429 aa24.55■■□□□ 1.52
CROCCP3-205ENST00000591316 HMOX1P09601 288 aa24.54■■□□□ 1.52
CROCCP3-205ENST00000591316 FAM98CQ17RN3 349 aaKnown RBP24.54■■□□□ 1.52
CROCCP3-205ENST00000591316 U2AF1L5P0DN76 240 aaPredicted RBP24.54■■□□□ 1.52
CROCCP3-205ENST00000591316 RXRBP28702 533 aa24.54■■□□□ 1.52
CROCCP3-205ENST00000591316 U2AF1Q01081 240 aaKnown RBP eCLIP24.54■■□□□ 1.52
CROCCP3-205ENST00000591316 SULT6B1Q6IMI4 303 aa24.54■■□□□ 1.52
CROCCP3-205ENST00000591316 A0A0G2JS52 829 aa24.53■■□□□ 1.52
CROCCP3-205ENST00000591316 RBM6P78332 1123 aaKnown RBP24.53■■□□□ 1.52
CROCCP3-205ENST00000591316 MYT1Q01538 1121 aa24.53■■□□□ 1.52
CROCCP3-205ENST00000591316 COL3A1P02461 1466 aaPredicted RBP24.53■■□□□ 1.52
CROCCP3-205ENST00000591316 AEBP1Q8IUX7 1158 aa24.52■■□□□ 1.52
CROCCP3-205ENST00000591316 IGSF1Q8N6C5 1336 aa24.51■■□□□ 1.51
CROCCP3-205ENST00000591316 THRAP3Q9Y2W1 955 aaKnown RBP24.5■■□□□ 1.51
CROCCP3-205ENST00000591316 RGPD2P0DJD1 1756 aa24.5■■□□□ 1.51
CROCCP3-205ENST00000591316 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.49■■□□□ 1.51
CROCCP3-205ENST00000591316 WDR43Q15061 677 aaKnown RBP eCLIP24.49■■□□□ 1.51
CROCCP3-205ENST00000591316 RAPGEF4Q8WZA2 1011 aa24.49■■□□□ 1.51
CROCCP3-205ENST00000591316 IL2RBP14784 551 aa24.48■■□□□ 1.51
CROCCP3-205ENST00000591316 BARGINQ6ZT62 677 aa24.47■■□□□ 1.51
CROCCP3-205ENST00000591316 TATP17735 454 aaPredicted RBP24.46■■□□□ 1.51
CROCCP3-205ENST00000591316 ADAMTS8Q9UP79 889 aa24.46■■□□□ 1.51
CROCCP3-205ENST00000591316 CCER2I3L3R5 266 aa24.45■■□□□ 1.5
CROCCP3-205ENST00000591316 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
CROCCP3-205ENST00000591316 SEPT12Q8IYM1 358 aa24.44■■□□□ 1.5
CROCCP3-205ENST00000591316 PNISRQ8TF01 805 aaKnown RBP24.44■■□□□ 1.5
CROCCP3-205ENST00000591316 GLI3P10071 1580 aa24.44■■□□□ 1.5
CROCCP3-205ENST00000591316 FAM9BQ8IZU0 186 aa24.43■■□□□ 1.5
CROCCP3-205ENST00000591316 ONECUT3O60422 494 aaPredicted RBP24.42■■□□□ 1.5
CROCCP3-205ENST00000591316 EXOC5O00471 708 aa24.42■■□□□ 1.5
CROCCP3-205ENST00000591316 FCHSD2O94868 740 aa24.42■■□□□ 1.5
CROCCP3-205ENST00000591316 PRKAR2BP31323 418 aa24.42■■□□□ 1.5
CROCCP3-205ENST00000591316 CDCA7Q9BWT1 371 aaPredicted RBP24.42■■□□□ 1.5
CROCCP3-205ENST00000591316 FAM208AQ9UK61 1670 aaKnown RBP24.41■■□□□ 1.5
CROCCP3-205ENST00000591316 DDB1Q16531 1140 aa24.41■■□□□ 1.5
CROCCP3-205ENST00000591316 RSPH6AQ9H0K4 717 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms