RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 LARP1Q6PKG0 1096 aaKnown RBP28.45■■■□□ 2.14
ERCC2-212ENST00000591309 SEPT12Q8IYM1 358 aa28.45■■■□□ 2.14
ERCC2-212ENST00000591309 KIF7Q2M1P5 1343 aa28.44■■■□□ 2.14
ERCC2-212ENST00000591309 NFAT5O94916 1531 aa28.44■■■□□ 2.14
ERCC2-212ENST00000591309 LMO7Q8WWI1 1683 aa28.44■■■□□ 2.14
ERCC2-212ENST00000591309 SPATA31A1Q5TZJ5 1347 aa28.43■■■□□ 2.14
ERCC2-212ENST00000591309 TOM1L2Q6ZVM7 507 aa28.43■■■□□ 2.14
ERCC2-212ENST00000591309 COL5A2P05997 1499 aaPredicted RBP28.42■■■□□ 2.14
ERCC2-212ENST00000591309 AXIN2Q9Y2T1 843 aa28.42■■■□□ 2.14
ERCC2-212ENST00000591309 ONECUT3O60422 494 aaPredicted RBP28.41■■■□□ 2.14
ERCC2-212ENST00000591309 AMPHP49418 695 aa28.39■■■□□ 2.14
ERCC2-212ENST00000591309 TCP11L2Q8N4U5 519 aa28.39■■■□□ 2.14
ERCC2-212ENST00000591309 CRB1P82279 1406 aa28.38■■■□□ 2.13
ERCC2-212ENST00000591309 THRAP3Q9Y2W1 955 aaKnown RBP28.38■■■□□ 2.13
ERCC2-212ENST00000591309 KIF20BQ96Q89 1820 aa28.38■■■□□ 2.13
ERCC2-212ENST00000591309 WDR17Q8IZU2 1322 aa28.38■■■□□ 2.13
ERCC2-212ENST00000591309 KNSTRNQ9Y448 316 aa28.37■■■□□ 2.13
ERCC2-212ENST00000591309 ABCC6O95255 1503 aa28.36■■■□□ 2.13
ERCC2-212ENST00000591309 COL18A1P39060 1754 aa28.36■■■□□ 2.13
ERCC2-212ENST00000591309 BARGINQ6ZT62 677 aa28.35■■■□□ 2.13
ERCC2-212ENST00000591309 KRT27Q7Z3Y8 459 aa28.35■■■□□ 2.13
ERCC2-212ENST00000591309 IP6K1Q92551 441 aa28.35■■■□□ 2.13
ERCC2-212ENST00000591309 MAP3K19Q56UN5 1328 aa28.34■■■□□ 2.13
ERCC2-212ENST00000591309 LTN1O94822 1766 aa28.34■■■□□ 2.13
ERCC2-212ENST00000591309 FBLN1P23142 703 aa28.33■■■□□ 2.13
ERCC2-212ENST00000591309 ZEB1P37275 1124 aaPredicted RBP28.33■■■□□ 2.13
ERCC2-212ENST00000591309 CCDC7Q96M83 1385 aa28.33■■■□□ 2.13
ERCC2-212ENST00000591309 RRS1Q15050 365 aaKnown RBP28.32■■■□□ 2.12
ERCC2-212ENST00000591309 ANKRD24Q8TF21 1146 aa28.32■■■□□ 2.12
ERCC2-212ENST00000591309 UPF1Q92900 1129 aaKnown RBP eCLIP28.31■■■□□ 2.12
ERCC2-212ENST00000591309 NLRP2Q9NX02 1062 aa28.31■■■□□ 2.12
ERCC2-212ENST00000591309 BLMP54132 1417 aaPredicted RBP28.31■■■□□ 2.12
ERCC2-212ENST00000591309 LTV1Q96GA3 475 aaPredicted RBP28.3■■■□□ 2.12
ERCC2-212ENST00000591309 CARD10Q9BWT7 1032 aa28.3■■■□□ 2.12
ERCC2-212ENST00000591309 RGPD5Q99666 1765 aa28.29■■■□□ 2.12
ERCC2-212ENST00000591309 ERBB3P21860 1342 aa28.29■■■□□ 2.12
ERCC2-212ENST00000591309 WASHC2AQ641Q2 1341 aa28.29■■■□□ 2.12
ERCC2-212ENST00000591309 HOXC9P31274 260 aa28.29■■■□□ 2.12
ERCC2-212ENST00000591309 NSD2O96028 1365 aa28.28■■■□□ 2.12
ERCC2-212ENST00000591309 PDE3BQ13370 1112 aa28.28■■■□□ 2.12
ERCC2-212ENST00000591309 RTL1A6NKG5 1358 aa28.27■■■□□ 2.12
ERCC2-212ENST00000591309 CDCA7Q9BWT1 371 aaPredicted RBP28.26■■■□□ 2.11
ERCC2-212ENST00000591309 PPM1GO15355 546 aaPredicted RBP28.25■■■□□ 2.11
ERCC2-212ENST00000591309 MORC1Q86VD1 984 aa28.25■■■□□ 2.11
ERCC2-212ENST00000591309 BRWD3Q6RI45 1802 aa28.25■■■□□ 2.11
ERCC2-212ENST00000591309 TNNT2P45379 298 aaPredicted RBP28.24■■■□□ 2.11
ERCC2-212ENST00000591309 THSD7AQ9UPZ6 1657 aa28.23■■■□□ 2.11
ERCC2-212ENST00000591309 SMG6Q86US8 1419 aaKnown RBP28.22■■■□□ 2.11
ERCC2-212ENST00000591309 FLT4P35916 1363 aa28.22■■■□□ 2.11
ERCC2-212ENST00000591309 KIF24Q5T7B8 1368 aa28.22■■■□□ 2.11
ERCC2-212ENST00000591309 DDB1Q16531 1140 aa28.21■■■□□ 2.11
ERCC2-212ENST00000591309 CCDC125Q86Z20 511 aa28.21■■■□□ 2.11
ERCC2-212ENST00000591309 SF3B2Q13435 895 aaKnown RBP28.2■■■□□ 2.1
ERCC2-212ENST00000591309 EMILIN1Q9Y6C2 1016 aa28.2■■■□□ 2.1
ERCC2-212ENST00000591309 ANKRD26Q9UPS8 1709 aa28.18■■■□□ 2.1
ERCC2-212ENST00000591309 HSP90AB2PQ58FF8 381 aa28.17■■■□□ 2.1
ERCC2-212ENST00000591309 FAM182BQ5T319 152 aa28.17■■■□□ 2.1
ERCC2-212ENST00000591309 INSRP06213 1382 aa28.16■■■□□ 2.1
ERCC2-212ENST00000591309 EXOC5O00471 708 aa28.16■■■□□ 2.1
ERCC2-212ENST00000591309 FAM196AQ6ZSG2 479 aa28.16■■■□□ 2.1
ERCC2-212ENST00000591309 IL2RBP14784 551 aa28.15■■■□□ 2.1
ERCC2-212ENST00000591309 AMER1Q5JTC6 1135 aaPredicted RBP28.15■■■□□ 2.1
ERCC2-212ENST00000591309 PER1O15534 1290 aaPredicted RBP28.14■■■□□ 2.1
ERCC2-212ENST00000591309 POLKQ9UBT6 870 aa28.14■■■□□ 2.1
ERCC2-212ENST00000591309 CC2D1BQ5T0F9 858 aaKnown RBP28.13■■■□□ 2.09
ERCC2-212ENST00000591309 FAM208AQ9UK61 1670 aaKnown RBP28.13■■■□□ 2.09
ERCC2-212ENST00000591309 CNGB1Q14028 1251 aaPredicted RBP28.12■■■□□ 2.09
ERCC2-212ENST00000591309 PARP4Q9UKK3 1724 aaKnown RBP28.12■■■□□ 2.09
ERCC2-212ENST00000591309 MAP2P11137 1827 aaKnown RBP28.11■■■□□ 2.09
ERCC2-212ENST00000591309 DISP2A7MBM2 1401 aa28.09■■■□□ 2.09
ERCC2-212ENST00000591309 PEAK1Q9H792 1746 aa28.08■■■□□ 2.09
ERCC2-212ENST00000591309 NBPF6Q5VWK0 638 aa28.07■■■□□ 2.08
ERCC2-212ENST00000591309 NBPF4Q96M43 638 aa28.07■■■□□ 2.08
ERCC2-212ENST00000591309 WNK3Q9BYP7 1800 aa28.06■■■□□ 2.08
ERCC2-212ENST00000591309 RAPGEF4Q8WZA2 1011 aa28.06■■■□□ 2.08
ERCC2-212ENST00000591309 OVOS2A0A0G2JMS6 1433 aa28.05■■■□□ 2.08
ERCC2-212ENST00000591309 LRRC37A3O60309 1634 aa28.05■■■□□ 2.08
ERCC2-212ENST00000591309 USHBP1Q8N6Y0 703 aa28.05■■■□□ 2.08
ERCC2-212ENST00000591309 NPC1L1Q9UHC9 1359 aa28.04■■■□□ 2.08
ERCC2-212ENST00000591309 BAG6P46379 1132 aa28.04■■■□□ 2.08
ERCC2-212ENST00000591309 TRIM37O94972 964 aa28.03■■■□□ 2.08
ERCC2-212ENST00000591309 TNS2Q63HR2 1409 aa28.02■■■□□ 2.08
ERCC2-212ENST00000591309 TATP17735 454 aaPredicted RBP28.02■■■□□ 2.08
ERCC2-212ENST00000591309 MARCH10Q8NA82 808 aaPredicted RBP28.02■■■□□ 2.08
ERCC2-212ENST00000591309 RGPD2P0DJD1 1756 aa27.99■■■□□ 2.07
ERCC2-212ENST00000591309 EIF4A2Q14240 407 aaKnown RBP27.99■■■□□ 2.07
ERCC2-212ENST00000591309 ZCRB1Q8TBF4 217 aaKnown RBP27.98■■■□□ 2.07
ERCC2-212ENST00000591309 DDX54Q8TDD1 881 aaKnown RBP27.98■■■□□ 2.07
ERCC2-212ENST00000591309 DEFB132Q7Z7B7 95 aa27.97■■■□□ 2.07
ERCC2-212ENST00000591309 EYA1Q99502 592 aa27.97■■■□□ 2.07
ERCC2-212ENST00000591309 RGPD1P0DJD0 1748 aa27.96■■■□□ 2.07
ERCC2-212ENST00000591309 APBA3O96018 575 aa27.96■■■□□ 2.07
ERCC2-212ENST00000591309 MTHFSP49914 203 aa27.96■■■□□ 2.07
ERCC2-212ENST00000591309 MEGF6O75095 1541 aa27.92■■■□□ 2.06
ERCC2-212ENST00000591309 EN1Q05925 392 aaPredicted RBP27.91■■■□□ 2.06
ERCC2-212ENST00000591309 DDX10Q13206 875 aaKnown RBP27.91■■■□□ 2.06
ERCC2-212ENST00000591309 EP400Q96L91 3159 aa27.91■■■□□ 2.06
ERCC2-212ENST00000591309 BCL11BQ9C0K0 894 aaPredicted RBP27.9■■■□□ 2.06
ERCC2-212ENST00000591309 BCL9O00512 1426 aa27.9■■■□□ 2.06
ERCC2-212ENST00000591309 ACSBG1Q96GR2 724 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms