RNA–Protein interactions for RNA: ENST00000591259.5

HKR1-220, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 1 (best) BASIC

Gene HKR1, Length 734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-220ENST00000591259 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
HKR1-220ENST00000591259 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
HKR1-220ENST00000591259 AXIN2Q9Y2T1 843 aa18.82■□□□□ 0.6
HKR1-220ENST00000591259 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
HKR1-220ENST00000591259 COL5A2P05997 1499 aaPredicted RBP18.81■□□□□ 0.6
HKR1-220ENST00000591259 CGNL1Q0VF96 1302 aa18.8■□□□□ 0.6
HKR1-220ENST00000591259 FBLN1P23142 703 aa18.8■□□□□ 0.6
HKR1-220ENST00000591259 FAM98CQ17RN3 349 aaKnown RBP18.8■□□□□ 0.6
HKR1-220ENST00000591259 CCDC7Q96M83 1385 aa18.8■□□□□ 0.6
HKR1-220ENST00000591259 USP35Q9P2H5 1018 aa18.79■□□□□ 0.6
HKR1-220ENST00000591259 SPATA31A1Q5TZJ5 1347 aa18.78■□□□□ 0.6
HKR1-220ENST00000591259 WASHC2AQ641Q2 1341 aa18.78■□□□□ 0.6
HKR1-220ENST00000591259 A0A0G2JS52 829 aa18.78■□□□□ 0.6
HKR1-220ENST00000591259 MYT1Q01538 1121 aa18.78■□□□□ 0.6
HKR1-220ENST00000591259 SEPT12Q8IYM1 358 aa18.78■□□□□ 0.6
HKR1-220ENST00000591259 COL18A1P39060 1754 aa18.76■□□□□ 0.59
HKR1-220ENST00000591259 MAP3K19Q56UN5 1328 aa18.75■□□□□ 0.59
HKR1-220ENST00000591259 KIF20BQ96Q89 1820 aa18.75■□□□□ 0.59
HKR1-220ENST00000591259 ONECUT3O60422 494 aaPredicted RBP18.75■□□□□ 0.59
HKR1-220ENST00000591259 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
HKR1-220ENST00000591259 RRS1Q15050 365 aaKnown RBP18.75■□□□□ 0.59
HKR1-220ENST00000591259 TOM1L2Q6ZVM7 507 aa18.75■□□□□ 0.59
HKR1-220ENST00000591259 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
HKR1-220ENST00000591259 CRB1P82279 1406 aa18.74■□□□□ 0.59
HKR1-220ENST00000591259 ABCC6O95255 1503 aa18.74■□□□□ 0.59
HKR1-220ENST00000591259 AMPHP49418 695 aa18.73■□□□□ 0.59
HKR1-220ENST00000591259 TCP11L2Q8N4U5 519 aa18.73■□□□□ 0.59
HKR1-220ENST00000591259 IP6K1Q92551 441 aa18.73■□□□□ 0.59
HKR1-220ENST00000591259 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
HKR1-220ENST00000591259 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
HKR1-220ENST00000591259 ANKRD24Q8TF21 1146 aa18.71■□□□□ 0.59
HKR1-220ENST00000591259 ERBB3P21860 1342 aa18.71■□□□□ 0.59
HKR1-220ENST00000591259 LTN1O94822 1766 aa18.7■□□□□ 0.58
HKR1-220ENST00000591259 HOXC9P31274 260 aa18.7■□□□□ 0.58
HKR1-220ENST00000591259 BLMP54132 1417 aaPredicted RBP18.7■□□□□ 0.58
HKR1-220ENST00000591259 BARGINQ6ZT62 677 aa18.7■□□□□ 0.58
HKR1-220ENST00000591259 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
HKR1-220ENST00000591259 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
HKR1-220ENST00000591259 NSD2O96028 1365 aa18.69■□□□□ 0.58
HKR1-220ENST00000591259 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
HKR1-220ENST00000591259 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
HKR1-220ENST00000591259 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
HKR1-220ENST00000591259 CARD10Q9BWT7 1032 aa18.68■□□□□ 0.58
HKR1-220ENST00000591259 NLRP2Q9NX02 1062 aa18.68■□□□□ 0.58
HKR1-220ENST00000591259 EMILIN1Q9Y6C2 1016 aa18.68■□□□□ 0.58
HKR1-220ENST00000591259 THSD7AQ9UPZ6 1657 aa18.68■□□□□ 0.58
HKR1-220ENST00000591259 AMER1Q5JTC6 1135 aaPredicted RBP18.67■□□□□ 0.58
HKR1-220ENST00000591259 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.58
HKR1-220ENST00000591259 RGPD5Q99666 1765 aa18.67■□□□□ 0.58
HKR1-220ENST00000591259 PPM1GO15355 546 aaPredicted RBP18.66■□□□□ 0.58
HKR1-220ENST00000591259 PER1O15534 1290 aaPredicted RBP18.66■□□□□ 0.58
HKR1-220ENST00000591259 MORC1Q86VD1 984 aa18.66■□□□□ 0.58
HKR1-220ENST00000591259 FLT4P35916 1363 aa18.65■□□□□ 0.58
HKR1-220ENST00000591259 HSP90AB2PQ58FF8 381 aa18.64■□□□□ 0.57
HKR1-220ENST00000591259 FAM182BQ5T319 152 aa18.64■□□□□ 0.57
HKR1-220ENST00000591259 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
HKR1-220ENST00000591259 POLKQ9UBT6 870 aa18.63■□□□□ 0.57
HKR1-220ENST00000591259 KIF24Q5T7B8 1368 aa18.63■□□□□ 0.57
HKR1-220ENST00000591259 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
HKR1-220ENST00000591259 BRWD3Q6RI45 1802 aa18.63■□□□□ 0.57
HKR1-220ENST00000591259 PDE3BQ13370 1112 aa18.62■□□□□ 0.57
HKR1-220ENST00000591259 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
HKR1-220ENST00000591259 INSRP06213 1382 aa18.62■□□□□ 0.57
HKR1-220ENST00000591259 ANKRD26Q9UPS8 1709 aa18.62■□□□□ 0.57
HKR1-220ENST00000591259 DISP2A7MBM2 1401 aa18.61■□□□□ 0.57
HKR1-220ENST00000591259 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
HKR1-220ENST00000591259 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
HKR1-220ENST00000591259 CACNB1Q02641 598 aaPredicted RBP18.59■□□□□ 0.57
HKR1-220ENST00000591259 DDB1Q16531 1140 aa18.59■□□□□ 0.57
HKR1-220ENST00000591259 IL2RBP14784 551 aa18.58■□□□□ 0.56
HKR1-220ENST00000591259 NBPF6Q5VWK0 638 aa18.58■□□□□ 0.56
HKR1-220ENST00000591259 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
HKR1-220ENST00000591259 NBPF4Q96M43 638 aa18.58■□□□□ 0.56
HKR1-220ENST00000591259 EP400Q96L91 3159 aa18.57■□□□□ 0.56
HKR1-220ENST00000591259 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
HKR1-220ENST00000591259 LRRC37A3O60309 1634 aa18.56■□□□□ 0.56
HKR1-220ENST00000591259 NPC1L1Q9UHC9 1359 aa18.56■□□□□ 0.56
HKR1-220ENST00000591259 FAM208AQ9UK61 1670 aaKnown RBP18.55■□□□□ 0.56
HKR1-220ENST00000591259 EXOC5O00471 708 aa18.55■□□□□ 0.56
HKR1-220ENST00000591259 WNK3Q9BYP7 1800 aa18.54■□□□□ 0.56
HKR1-220ENST00000591259 FAM196AQ6ZSG2 479 aa18.54■□□□□ 0.56
HKR1-220ENST00000591259 TNS2Q63HR2 1409 aa18.54■□□□□ 0.56
HKR1-220ENST00000591259 EIF4A2Q14240 407 aaKnown RBP18.53■□□□□ 0.56
HKR1-220ENST00000591259 CCDC125Q86Z20 511 aa18.52■□□□□ 0.56
HKR1-220ENST00000591259 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
HKR1-220ENST00000591259 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
HKR1-220ENST00000591259 OVOS2A0A0G2JMS6 1433 aa18.51■□□□□ 0.55
HKR1-220ENST00000591259 MEGF6O75095 1541 aa18.51■□□□□ 0.55
HKR1-220ENST00000591259 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
HKR1-220ENST00000591259 TRIM37O94972 964 aa18.5■□□□□ 0.55
HKR1-220ENST00000591259 MTHFSP49914 203 aa18.5■□□□□ 0.55
HKR1-220ENST00000591259 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
HKR1-220ENST00000591259 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
HKR1-220ENST00000591259 EYA1Q99502 592 aa18.5■□□□□ 0.55
HKR1-220ENST00000591259 RGPD2P0DJD1 1756 aa18.5■□□□□ 0.55
HKR1-220ENST00000591259 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
HKR1-220ENST00000591259 DEFB132Q7Z7B7 95 aa18.47■□□□□ 0.55
HKR1-220ENST00000591259 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
HKR1-220ENST00000591259 NCAPD2Q15021 1401 aa18.47■□□□□ 0.55
HKR1-220ENST00000591259 ZCRB1Q8TBF4 217 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms