RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 POLKQ9UBT6 870 aa15.06■□□□□ 0
CDK3-204ENST00000588812 PPM1GO15355 546 aaPredicted RBP15.05■□□□□ -0
CDK3-204ENST00000588812 HOXC9P31274 260 aa15.05■□□□□ -0
CDK3-204ENST00000588812 EVA1CP58658 441 aa15.05■□□□□ -0
CDK3-204ENST00000588812 RALBP1Q15311 655 aa15.05■□□□□ -0
CDK3-204ENST00000588812 AXIN2Q9Y2T1 843 aa15.05■□□□□ -0
CDK3-204ENST00000588812 EMILIN1Q9Y6C2 1016 aa15.05■□□□□ -0
CDK3-204ENST00000588812 NWD2Q9ULI1 1742 aa15.05■□□□□ -0
CDK3-204ENST00000588812 LTN1O94822 1766 aa15.05■□□□□ -0
CDK3-204ENST00000588812 PLCH1Q4KWH8 1693 aa15.04■□□□□ -0
CDK3-204ENST00000588812 LMO7Q8WWI1 1683 aa15.04■□□□□ -0
CDK3-204ENST00000588812 CAMTA1Q9Y6Y1 1673 aa15.04■□□□□ -0
CDK3-204ENST00000588812 BCL9LQ86UU0 1499 aa15.04■□□□□ -0
CDK3-204ENST00000588812 BLMP54132 1417 aaPredicted RBP15.04■□□□□ -0
CDK3-204ENST00000588812 FLT4P35916 1363 aa15.04■□□□□ -0
CDK3-204ENST00000588812 PARD3Q8TEW0 1356 aa15.04■□□□□ -0
CDK3-204ENST00000588812 COL18A1P39060 1754 aa15.03■□□□□ -0
CDK3-204ENST00000588812 MAP2P11137 1827 aaKnown RBP15.03■□□□□ -0
CDK3-204ENST00000588812 SMG6Q86US8 1419 aaKnown RBP15.02■□□□□ -0
CDK3-204ENST00000588812 INSRP06213 1382 aa15.02■□□□□ -0
CDK3-204ENST00000588812 MTHFSP49914 203 aa15.02■□□□□ -0
CDK3-204ENST00000588812 STRN4Q9NRL3 753 aa15.02■□□□□ -0
CDK3-204ENST00000588812 TRPC5Q9UL62 973 aaPredicted RBP15.02■□□□□ -0
CDK3-204ENST00000588812 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
CDK3-204ENST00000588812 CSB-PGBD3P0DP91 1061 aa15.01□□□□□ -0.01
CDK3-204ENST00000588812 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
CDK3-204ENST00000588812 VPS72Q15906 364 aa15.01□□□□□ -0.01
CDK3-204ENST00000588812 HSP90AB2PQ58FF8 381 aa15.01□□□□□ -0.01
CDK3-204ENST00000588812 ANKRD24Q8TF21 1146 aa15.01□□□□□ -0.01
CDK3-204ENST00000588812 QTRT2Q9H974 415 aaKnown RBP15.01□□□□□ -0.01
CDK3-204ENST00000588812 TNKS1BP1Q9C0C2 1729 aaKnown RBP15□□□□□ -0.01
CDK3-204ENST00000588812 ERBB3P21860 1342 aa15□□□□□ -0.01
CDK3-204ENST00000588812 WDR17Q8IZU2 1322 aa15□□□□□ -0.01
CDK3-204ENST00000588812 PRKRIP1Q9H875 184 aaPredicted RBP15□□□□□ -0.01
CDK3-204ENST00000588812 CDK12Q9NYV4 1490 aaPredicted RBP15□□□□□ -0.01
CDK3-204ENST00000588812 ANP32CO43423 234 aa14.99□□□□□ -0.01
CDK3-204ENST00000588812 CCDC9Q9Y3X0 531 aaKnown RBP14.99□□□□□ -0.01
CDK3-204ENST00000588812 NRAPQ86VF7 1730 aa14.99□□□□□ -0.01
CDK3-204ENST00000588812 PEAK1Q9H792 1746 aa14.99□□□□□ -0.01
CDK3-204ENST00000588812 ATRNO75882 1429 aa14.99□□□□□ -0.01
CDK3-204ENST00000588812 LARP1Q6PKG0 1096 aaKnown RBP14.98□□□□□ -0.01
CDK3-204ENST00000588812 TOM1L2Q6ZVM7 507 aa14.98□□□□□ -0.01
CDK3-204ENST00000588812 LTV1Q96GA3 475 aaPredicted RBP14.98□□□□□ -0.01
CDK3-204ENST00000588812 CRB1P82279 1406 aa14.98□□□□□ -0.01
CDK3-204ENST00000588812 RGPD5Q99666 1765 aa14.98□□□□□ -0.01
CDK3-204ENST00000588812 SPATA31A5Q5VU36 1347 aa14.97□□□□□ -0.01
CDK3-204ENST00000588812 SPATA31A7Q8IWB4 1347 aa14.97□□□□□ -0.01
CDK3-204ENST00000588812 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
CDK3-204ENST00000588812 GJD4Q96KN9 370 aaPredicted RBP14.97□□□□□ -0.01
CDK3-204ENST00000588812 CFAP53Q96M91 514 aa14.97□□□□□ -0.01
CDK3-204ENST00000588812 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
CDK3-204ENST00000588812 SPATA31A1Q5TZJ5 1347 aa14.96□□□□□ -0.01
CDK3-204ENST00000588812 RBM6P78332 1123 aaKnown RBP14.96□□□□□ -0.01
CDK3-204ENST00000588812 CARD10Q9BWT7 1032 aa14.96□□□□□ -0.01
CDK3-204ENST00000588812 RXRBP28702 533 aa14.95□□□□□ -0.02
CDK3-204ENST00000588812 EIF4A2Q14240 407 aaKnown RBP14.95□□□□□ -0.02
CDK3-204ENST00000588812 THRAP3Q9Y2W1 955 aaKnown RBP14.95□□□□□ -0.02
CDK3-204ENST00000588812 DIAPH1O60610 1272 aaKnown RBP14.94□□□□□ -0.02
CDK3-204ENST00000588812 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
CDK3-204ENST00000588812 USP35Q9P2H5 1018 aa14.94□□□□□ -0.02
CDK3-204ENST00000588812 FAM208AQ9UK61 1670 aaKnown RBP14.93□□□□□ -0.02
CDK3-204ENST00000588812 NBPF6Q5VWK0 638 aa14.93□□□□□ -0.02
CDK3-204ENST00000588812 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
CDK3-204ENST00000588812 NBPF4Q96M43 638 aa14.93□□□□□ -0.02
CDK3-204ENST00000588812 IL13P35225 146 aa14.92□□□□□ -0.02
CDK3-204ENST00000588812 BARGINQ6ZT62 677 aa14.92□□□□□ -0.02
CDK3-204ENST00000588812 ONECUT3O60422 494 aaPredicted RBP14.91□□□□□ -0.02
CDK3-204ENST00000588812 EYA1Q99502 592 aa14.91□□□□□ -0.02
CDK3-204ENST00000588812 CDCA7Q9BWT1 371 aaPredicted RBP14.91□□□□□ -0.02
CDK3-204ENST00000588812 NUDCQ9Y266 331 aa14.91□□□□□ -0.02
CDK3-204ENST00000588812 GLI3P10071 1580 aa14.9□□□□□ -0.02
CDK3-204ENST00000588812 COL3A1P02461 1466 aaPredicted RBP14.9□□□□□ -0.02
CDK3-204ENST00000588812 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
CDK3-204ENST00000588812 IGSF1Q8N6C5 1336 aa14.9□□□□□ -0.02
CDK3-204ENST00000588812 IL2RBP14784 551 aa14.88□□□□□ -0.03
CDK3-204ENST00000588812 USHBP1Q8N6Y0 703 aa14.88□□□□□ -0.03
CDK3-204ENST00000588812 RGS12O14924 1447 aa14.88□□□□□ -0.03
CDK3-204ENST00000588812 NCAPD2Q15021 1401 aa14.87□□□□□ -0.03
CDK3-204ENST00000588812 A0A0G2JS52 829 aa14.87□□□□□ -0.03
CDK3-204ENST00000588812 U2SURPO15042 1029 aaKnown RBP14.87□□□□□ -0.03
CDK3-204ENST00000588812 MYT1Q01538 1121 aa14.87□□□□□ -0.03
CDK3-204ENST00000588812 RAPGEF4Q8WZA2 1011 aa14.87□□□□□ -0.03
CDK3-204ENST00000588812 RGPD2P0DJD1 1756 aa14.86□□□□□ -0.03
CDK3-204ENST00000588812 SEPT12Q8IYM1 358 aa14.86□□□□□ -0.03
CDK3-204ENST00000588812 DISP2A7MBM2 1401 aa14.85□□□□□ -0.03
CDK3-204ENST00000588812 TATP17735 454 aaPredicted RBP14.85□□□□□ -0.03
CDK3-204ENST00000588812 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
CDK3-204ENST00000588812 KDRP35968 1356 aa14.85□□□□□ -0.03
CDK3-204ENST00000588812 RGPD1P0DJD0 1748 aa14.84□□□□□ -0.03
CDK3-204ENST00000588812 EXOC5O00471 708 aa14.84□□□□□ -0.03
CDK3-204ENST00000588812 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
CDK3-204ENST00000588812 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDK3-204ENST00000588812 DDB1Q16531 1140 aa14.84□□□□□ -0.03
CDK3-204ENST00000588812 PLEKHG2Q9H7P9 1386 aa14.84□□□□□ -0.03
CDK3-204ENST00000588812 THSD7AQ9UPZ6 1657 aa14.84□□□□□ -0.03
CDK3-204ENST00000588812 EP400Q96L91 3159 aa14.83□□□□□ -0.03
CDK3-204ENST00000588812 AEBP1Q8IUX7 1158 aa14.83□□□□□ -0.04
CDK3-204ENST00000588812 FCHSD2O94868 740 aa14.82□□□□□ -0.04
CDK3-204ENST00000588812 HMOX1P09601 288 aa14.82□□□□□ -0.04
CDK3-204ENST00000588812 PDE3BQ13370 1112 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms