RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 NRKQ7Z2Y5 1582 aa24.59■■□□□ 1.53
RETREG3-205ENST00000586870 EVA1CP58658 441 aa24.59■■□□□ 1.53
RETREG3-205ENST00000586870 RXRBP28702 533 aa24.58■■□□□ 1.53
RETREG3-205ENST00000586870 CPDO75976 1380 aa24.57■■□□□ 1.52
RETREG3-205ENST00000586870 ERICH6BQ5W0A0 696 aa24.57■■□□□ 1.52
RETREG3-205ENST00000586870 PELP1Q8IZL8 1130 aaKnown RBP24.57■■□□□ 1.52
RETREG3-205ENST00000586870 STRN4Q9NRL3 753 aa24.56■■□□□ 1.52
RETREG3-205ENST00000586870 PDE3BQ13370 1112 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 ABCA3Q99758 1704 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 SLIT3O75094 1523 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 SLIT2O94813 1529 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 BCL9LQ86UU0 1499 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 RBM6P78332 1123 aaKnown RBP24.54■■□□□ 1.52
RETREG3-205ENST00000586870 ARHGEF25Q86VW2 580 aa24.54■■□□□ 1.52
RETREG3-205ENST00000586870 PHRF1Q9P1Y6 1649 aaKnown RBP24.54■■□□□ 1.52
RETREG3-205ENST00000586870 WDR43Q15061 677 aaKnown RBP eCLIP24.53■■□□□ 1.52
RETREG3-205ENST00000586870 OVOS2A0A0J9YW53 1432 aa24.52■■□□□ 1.52
RETREG3-205ENST00000586870 OVOS2Q6IE36 1432 aa24.52■■□□□ 1.52
RETREG3-205ENST00000586870 NSD2O96028 1365 aa24.52■■□□□ 1.52
RETREG3-205ENST00000586870 MARF1Q9Y4F3 1742 aaKnown RBP24.51■■□□□ 1.51
RETREG3-205ENST00000586870 VPS72Q15906 364 aa24.51■■□□□ 1.51
RETREG3-205ENST00000586870 GJD4Q96KN9 370 aaPredicted RBP24.51■■□□□ 1.51
RETREG3-205ENST00000586870 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
RETREG3-205ENST00000586870 CRYBG1Q9Y4K1 1723 aa24.51■■□□□ 1.51
RETREG3-205ENST00000586870 AATKQ6ZMQ8 1374 aa24.5■■□□□ 1.51
RETREG3-205ENST00000586870 COL14A1Q05707 1796 aaKnown RBP24.5■■□□□ 1.51
RETREG3-205ENST00000586870 MORC1Q86VD1 984 aa24.5■■□□□ 1.51
RETREG3-205ENST00000586870 FBLN1P23142 703 aa24.48■■□□□ 1.51
RETREG3-205ENST00000586870 AMPHP49418 695 aa24.48■■□□□ 1.51
RETREG3-205ENST00000586870 ATRNO75882 1429 aa24.48■■□□□ 1.51
RETREG3-205ENST00000586870 CSB-PGBD3P0DP91 1061 aa24.47■■□□□ 1.51
RETREG3-205ENST00000586870 TNNT2P45379 298 aaPredicted RBP24.46■■□□□ 1.51
RETREG3-205ENST00000586870 AXIN2Q9Y2T1 843 aa24.46■■□□□ 1.51
RETREG3-205ENST00000586870 RRS1Q15050 365 aaKnown RBP24.45■■□□□ 1.5
RETREG3-205ENST00000586870 USP35Q9P2H5 1018 aa24.45■■□□□ 1.5
RETREG3-205ENST00000586870 NFAT5O94916 1531 aa24.44■■□□□ 1.5
RETREG3-205ENST00000586870 SENP3-EIF4A1A0A087X0R7 540 aa24.44■■□□□ 1.5
RETREG3-205ENST00000586870 RNF123Q5XPI4 1314 aa24.44■■□□□ 1.5
RETREG3-205ENST00000586870 PLCH1Q4KWH8 1693 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 A0A0G2JS52 829 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 MYT1Q01538 1121 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 LARP1Q6PKG0 1096 aaKnown RBP24.43■■□□□ 1.5
RETREG3-205ENST00000586870 TOM1L2Q6ZVM7 507 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 MAP3K19Q56UN5 1328 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 PPM1GO15355 546 aaPredicted RBP24.43■■□□□ 1.5
RETREG3-205ENST00000586870 IP6K1Q92551 441 aa24.42■■□□□ 1.5
RETREG3-205ENST00000586870 CAMTA1Q9Y6Y1 1673 aa24.42■■□□□ 1.5
RETREG3-205ENST00000586870 SPATA31A5Q5VU36 1347 aa24.41■■□□□ 1.5
RETREG3-205ENST00000586870 SPATA31A7Q8IWB4 1347 aa24.41■■□□□ 1.5
RETREG3-205ENST00000586870 NWD2Q9ULI1 1742 aa24.41■■□□□ 1.5
RETREG3-205ENST00000586870 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
RETREG3-205ENST00000586870 SALL2Q9Y467 1007 aaPredicted RBP24.4■■□□□ 1.5
RETREG3-205ENST00000586870 LTV1Q96GA3 475 aaPredicted RBP24.39■■□□□ 1.5
RETREG3-205ENST00000586870 IRX6P78412 446 aaPredicted RBP24.39■■□□□ 1.49
RETREG3-205ENST00000586870 FAM98CQ17RN3 349 aaKnown RBP24.39■■□□□ 1.49
RETREG3-205ENST00000586870 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
RETREG3-205ENST00000586870 SPATA31A1Q5TZJ5 1347 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 WDR17Q8IZU2 1322 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 HOXC9P31274 260 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 ANKRD24Q8TF21 1146 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.36■■□□□ 1.49
RETREG3-205ENST00000586870 TCP11L2Q8N4U5 519 aa24.36■■□□□ 1.49
RETREG3-205ENST00000586870 NLRP2Q9NX02 1062 aa24.36■■□□□ 1.49
RETREG3-205ENST00000586870 PPP4R2Q9NY27 417 aa24.35■■□□□ 1.49
RETREG3-205ENST00000586870 EMILIN1Q9Y6C2 1016 aa24.35■■□□□ 1.49
RETREG3-205ENST00000586870 SEPT12Q8IYM1 358 aa24.35■■□□□ 1.49
RETREG3-205ENST00000586870 NGEFQ8N5V2 710 aa24.35■■□□□ 1.49
RETREG3-205ENST00000586870 LMO7Q8WWI1 1683 aa24.34■■□□□ 1.49
RETREG3-205ENST00000586870 ANKRD26Q9UPS8 1709 aa24.34■■□□□ 1.49
RETREG3-205ENST00000586870 CRB1P82279 1406 aa24.34■■□□□ 1.49
RETREG3-205ENST00000586870 CFAP53Q96M91 514 aa24.34■■□□□ 1.49
RETREG3-205ENST00000586870 THRAP3Q9Y2W1 955 aaKnown RBP24.34■■□□□ 1.49
RETREG3-205ENST00000586870 CDK12Q9NYV4 1490 aaPredicted RBP24.33■■□□□ 1.49
RETREG3-205ENST00000586870 ERBB3P21860 1342 aa24.33■■□□□ 1.49
RETREG3-205ENST00000586870 POLKQ9UBT6 870 aa24.33■■□□□ 1.49
RETREG3-205ENST00000586870 RTL1A6NKG5 1358 aa24.33■■□□□ 1.49
RETREG3-205ENST00000586870 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
RETREG3-205ENST00000586870 HSP90AB2PQ58FF8 381 aa24.32■■□□□ 1.48
RETREG3-205ENST00000586870 CARD10Q9BWT7 1032 aa24.32■■□□□ 1.48
RETREG3-205ENST00000586870 FLT4P35916 1363 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 RGS12O14924 1447 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 ABCC6O95255 1503 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 KIF24Q5T7B8 1368 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 ONECUT3O60422 494 aaPredicted RBP24.31■■□□□ 1.48
RETREG3-205ENST00000586870 MTHFSP49914 203 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 BARGINQ6ZT62 677 aa24.3■■□□□ 1.48
RETREG3-205ENST00000586870 CDCA7LQ96GN5 454 aa24.3■■□□□ 1.48
RETREG3-205ENST00000586870 ZNF521Q96K83 1311 aa24.3■■□□□ 1.48
RETREG3-205ENST00000586870 RCAN3Q9UKA8 241 aa24.29■■□□□ 1.48
RETREG3-205ENST00000586870 GLI3P10071 1580 aa24.29■■□□□ 1.48
RETREG3-205ENST00000586870 COL18A1P39060 1754 aa24.29■■□□□ 1.48
RETREG3-205ENST00000586870 LTN1O94822 1766 aa24.27■■□□□ 1.48
RETREG3-205ENST00000586870 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
RETREG3-205ENST00000586870 CDCA7Q9BWT1 371 aaPredicted RBP24.25■■□□□ 1.47
RETREG3-205ENST00000586870 APAF1O14727 1248 aa24.24■■□□□ 1.47
RETREG3-205ENST00000586870 GOLGA2Q08379 1002 aa24.24■■□□□ 1.47
RETREG3-205ENST00000586870 KRT27Q7Z3Y8 459 aa24.24■■□□□ 1.47
RETREG3-205ENST00000586870 RRP1P56182 461 aaKnown RBP24.22■■□□□ 1.47
RETREG3-205ENST00000586870 RUNDC1Q96C34 613 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 1677 ms