RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 NRKQ7Z2Y5 1582 aa24.59■■□□□ 1.53
RETREG3-205ENST00000586870 EVA1CP58658 441 aa24.59■■□□□ 1.53
RETREG3-205ENST00000586870 RXRBP28702 533 aa24.58■■□□□ 1.53
RETREG3-205ENST00000586870 CPDO75976 1380 aa24.57■■□□□ 1.52
RETREG3-205ENST00000586870 ERICH6BQ5W0A0 696 aa24.57■■□□□ 1.52
RETREG3-205ENST00000586870 PELP1Q8IZL8 1130 aaKnown RBP24.57■■□□□ 1.52
RETREG3-205ENST00000586870 STRN4Q9NRL3 753 aa24.56■■□□□ 1.52
RETREG3-205ENST00000586870 PDE3BQ13370 1112 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 ABCA3Q99758 1704 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 SLIT3O75094 1523 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 SLIT2O94813 1529 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 BCL9LQ86UU0 1499 aa24.55■■□□□ 1.52
RETREG3-205ENST00000586870 RBM6P78332 1123 aaKnown RBP24.54■■□□□ 1.52
RETREG3-205ENST00000586870 ARHGEF25Q86VW2 580 aa24.54■■□□□ 1.52
RETREG3-205ENST00000586870 PHRF1Q9P1Y6 1649 aaKnown RBP24.54■■□□□ 1.52
RETREG3-205ENST00000586870 WDR43Q15061 677 aaKnown RBP eCLIP24.53■■□□□ 1.52
RETREG3-205ENST00000586870 OVOS2A0A0J9YW53 1432 aa24.52■■□□□ 1.52
RETREG3-205ENST00000586870 OVOS2Q6IE36 1432 aa24.52■■□□□ 1.52
RETREG3-205ENST00000586870 NSD2O96028 1365 aa24.52■■□□□ 1.52
RETREG3-205ENST00000586870 MARF1Q9Y4F3 1742 aaKnown RBP24.51■■□□□ 1.51
RETREG3-205ENST00000586870 VPS72Q15906 364 aa24.51■■□□□ 1.51
RETREG3-205ENST00000586870 GJD4Q96KN9 370 aaPredicted RBP24.51■■□□□ 1.51
RETREG3-205ENST00000586870 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
RETREG3-205ENST00000586870 CRYBG1Q9Y4K1 1723 aa24.51■■□□□ 1.51
RETREG3-205ENST00000586870 AATKQ6ZMQ8 1374 aa24.5■■□□□ 1.51
RETREG3-205ENST00000586870 COL14A1Q05707 1796 aaKnown RBP24.5■■□□□ 1.51
RETREG3-205ENST00000586870 MORC1Q86VD1 984 aa24.5■■□□□ 1.51
RETREG3-205ENST00000586870 FBLN1P23142 703 aa24.48■■□□□ 1.51
RETREG3-205ENST00000586870 AMPHP49418 695 aa24.48■■□□□ 1.51
RETREG3-205ENST00000586870 ATRNO75882 1429 aa24.48■■□□□ 1.51
RETREG3-205ENST00000586870 CSB-PGBD3P0DP91 1061 aa24.47■■□□□ 1.51
RETREG3-205ENST00000586870 TNNT2P45379 298 aaPredicted RBP24.46■■□□□ 1.51
RETREG3-205ENST00000586870 AXIN2Q9Y2T1 843 aa24.46■■□□□ 1.51
RETREG3-205ENST00000586870 RRS1Q15050 365 aaKnown RBP24.45■■□□□ 1.5
RETREG3-205ENST00000586870 USP35Q9P2H5 1018 aa24.45■■□□□ 1.5
RETREG3-205ENST00000586870 NFAT5O94916 1531 aa24.44■■□□□ 1.5
RETREG3-205ENST00000586870 SENP3-EIF4A1A0A087X0R7 540 aa24.44■■□□□ 1.5
RETREG3-205ENST00000586870 RNF123Q5XPI4 1314 aa24.44■■□□□ 1.5
RETREG3-205ENST00000586870 PLCH1Q4KWH8 1693 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 A0A0G2JS52 829 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 MYT1Q01538 1121 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 LARP1Q6PKG0 1096 aaKnown RBP24.43■■□□□ 1.5
RETREG3-205ENST00000586870 TOM1L2Q6ZVM7 507 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 MAP3K19Q56UN5 1328 aa24.43■■□□□ 1.5
RETREG3-205ENST00000586870 PPM1GO15355 546 aaPredicted RBP24.43■■□□□ 1.5
RETREG3-205ENST00000586870 IP6K1Q92551 441 aa24.42■■□□□ 1.5
RETREG3-205ENST00000586870 CAMTA1Q9Y6Y1 1673 aa24.42■■□□□ 1.5
RETREG3-205ENST00000586870 SPATA31A5Q5VU36 1347 aa24.41■■□□□ 1.5
RETREG3-205ENST00000586870 SPATA31A7Q8IWB4 1347 aa24.41■■□□□ 1.5
RETREG3-205ENST00000586870 NWD2Q9ULI1 1742 aa24.41■■□□□ 1.5
RETREG3-205ENST00000586870 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
RETREG3-205ENST00000586870 SALL2Q9Y467 1007 aaPredicted RBP24.4■■□□□ 1.5
RETREG3-205ENST00000586870 LTV1Q96GA3 475 aaPredicted RBP24.39■■□□□ 1.5
RETREG3-205ENST00000586870 IRX6P78412 446 aaPredicted RBP24.39■■□□□ 1.49
RETREG3-205ENST00000586870 FAM98CQ17RN3 349 aaKnown RBP24.39■■□□□ 1.49
RETREG3-205ENST00000586870 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
RETREG3-205ENST00000586870 SPATA31A1Q5TZJ5 1347 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 WDR17Q8IZU2 1322 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 HOXC9P31274 260 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 ANKRD24Q8TF21 1146 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
RETREG3-205ENST00000586870 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.36■■□□□ 1.49
RETREG3-205ENST00000586870 TCP11L2Q8N4U5 519 aa24.36■■□□□ 1.49
RETREG3-205ENST00000586870 NLRP2Q9NX02 1062 aa24.36■■□□□ 1.49
RETREG3-205ENST00000586870 PPP4R2Q9NY27 417 aa24.35■■□□□ 1.49
RETREG3-205ENST00000586870 EMILIN1Q9Y6C2 1016 aa24.35■■□□□ 1.49
RETREG3-205ENST00000586870 SEPT12Q8IYM1 358 aa24.35■■□□□ 1.49
RETREG3-205ENST00000586870 NGEFQ8N5V2 710 aa24.35■■□□□ 1.49
RETREG3-205ENST00000586870 LMO7Q8WWI1 1683 aa24.34■■□□□ 1.49
RETREG3-205ENST00000586870 ANKRD26Q9UPS8 1709 aa24.34■■□□□ 1.49
RETREG3-205ENST00000586870 CRB1P82279 1406 aa24.34■■□□□ 1.49
RETREG3-205ENST00000586870 CFAP53Q96M91 514 aa24.34■■□□□ 1.49
RETREG3-205ENST00000586870 THRAP3Q9Y2W1 955 aaKnown RBP24.34■■□□□ 1.49
RETREG3-205ENST00000586870 CDK12Q9NYV4 1490 aaPredicted RBP24.33■■□□□ 1.49
RETREG3-205ENST00000586870 ERBB3P21860 1342 aa24.33■■□□□ 1.49
RETREG3-205ENST00000586870 POLKQ9UBT6 870 aa24.33■■□□□ 1.49
RETREG3-205ENST00000586870 RTL1A6NKG5 1358 aa24.33■■□□□ 1.49
RETREG3-205ENST00000586870 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
RETREG3-205ENST00000586870 HSP90AB2PQ58FF8 381 aa24.32■■□□□ 1.48
RETREG3-205ENST00000586870 CARD10Q9BWT7 1032 aa24.32■■□□□ 1.48
RETREG3-205ENST00000586870 FLT4P35916 1363 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 RGS12O14924 1447 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 ABCC6O95255 1503 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 KIF24Q5T7B8 1368 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 ONECUT3O60422 494 aaPredicted RBP24.31■■□□□ 1.48
RETREG3-205ENST00000586870 MTHFSP49914 203 aa24.31■■□□□ 1.48
RETREG3-205ENST00000586870 BARGINQ6ZT62 677 aa24.3■■□□□ 1.48
RETREG3-205ENST00000586870 CDCA7LQ96GN5 454 aa24.3■■□□□ 1.48
RETREG3-205ENST00000586870 ZNF521Q96K83 1311 aa24.3■■□□□ 1.48
RETREG3-205ENST00000586870 RCAN3Q9UKA8 241 aa24.29■■□□□ 1.48
RETREG3-205ENST00000586870 GLI3P10071 1580 aa24.29■■□□□ 1.48
RETREG3-205ENST00000586870 COL18A1P39060 1754 aa24.29■■□□□ 1.48
RETREG3-205ENST00000586870 LTN1O94822 1766 aa24.27■■□□□ 1.48
RETREG3-205ENST00000586870 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
RETREG3-205ENST00000586870 CDCA7Q9BWT1 371 aaPredicted RBP24.25■■□□□ 1.47
RETREG3-205ENST00000586870 APAF1O14727 1248 aa24.24■■□□□ 1.47
RETREG3-205ENST00000586870 GOLGA2Q08379 1002 aa24.24■■□□□ 1.47
RETREG3-205ENST00000586870 KRT27Q7Z3Y8 459 aa24.24■■□□□ 1.47
RETREG3-205ENST00000586870 RRP1P56182 461 aaKnown RBP24.22■■□□□ 1.47
RETREG3-205ENST00000586870 RUNDC1Q96C34 613 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms