RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 ABCC6O95255 1503 aa19.28■□□□□ 0.68
TPM4-205ENST00000586833 MYOM1P52179 1685 aa19.27■□□□□ 0.68
TPM4-205ENST00000586833 PLCH1Q4KWH8 1693 aa19.27■□□□□ 0.68
TPM4-205ENST00000586833 NFAT5O94916 1531 aa19.27■□□□□ 0.68
TPM4-205ENST00000586833 SPATA31A1Q5TZJ5 1347 aa19.26■□□□□ 0.67
TPM4-205ENST00000586833 LARP1Q6PKG0 1096 aaKnown RBP19.26■□□□□ 0.67
TPM4-205ENST00000586833 TCP11L2Q8N4U5 519 aa19.26■□□□□ 0.67
TPM4-205ENST00000586833 IP6K1Q92551 441 aa19.26■□□□□ 0.67
TPM4-205ENST00000586833 COL5A2P05997 1499 aaPredicted RBP19.26■□□□□ 0.67
TPM4-205ENST00000586833 USP54Q70EL1 1684 aa19.26■□□□□ 0.67
TPM4-205ENST00000586833 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
TPM4-205ENST00000586833 RGS12O14924 1447 aa19.25■□□□□ 0.67
TPM4-205ENST00000586833 RTL1A6NKG5 1358 aa19.25■□□□□ 0.67
TPM4-205ENST00000586833 KIF24Q5T7B8 1368 aa19.25■□□□□ 0.67
TPM4-205ENST00000586833 FAM98CQ17RN3 349 aaKnown RBP19.25■□□□□ 0.67
TPM4-205ENST00000586833 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
TPM4-205ENST00000586833 CRB1P82279 1406 aa19.25■□□□□ 0.67
TPM4-205ENST00000586833 CAMTA1Q9Y6Y1 1673 aa19.24■□□□□ 0.67
TPM4-205ENST00000586833 ONECUT3O60422 494 aaPredicted RBP19.24■□□□□ 0.67
TPM4-205ENST00000586833 MORC1Q86VD1 984 aa19.24■□□□□ 0.67
TPM4-205ENST00000586833 SEPT12Q8IYM1 358 aa19.24■□□□□ 0.67
TPM4-205ENST00000586833 USP35Q9P2H5 1018 aa19.24■□□□□ 0.67
TPM4-205ENST00000586833 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
TPM4-205ENST00000586833 BARGINQ6ZT62 677 aa19.23■□□□□ 0.67
TPM4-205ENST00000586833 CDCA7Q9BWT1 371 aaPredicted RBP19.23■□□□□ 0.67
TPM4-205ENST00000586833 AXIN2Q9Y2T1 843 aa19.23■□□□□ 0.67
TPM4-205ENST00000586833 ANKRD24Q8TF21 1146 aa19.22■□□□□ 0.67
TPM4-205ENST00000586833 CARD10Q9BWT7 1032 aa19.22■□□□□ 0.67
TPM4-205ENST00000586833 SMG6Q86US8 1419 aaKnown RBP19.22■□□□□ 0.67
TPM4-205ENST00000586833 LMO7Q8WWI1 1683 aa19.21■□□□□ 0.67
TPM4-205ENST00000586833 HOXC9P31274 260 aa19.21■□□□□ 0.67
TPM4-205ENST00000586833 RRS1Q15050 365 aaKnown RBP19.21■□□□□ 0.67
TPM4-205ENST00000586833 ERBB3P21860 1342 aa19.21■□□□□ 0.67
TPM4-205ENST00000586833 FLT4P35916 1363 aa19.2■□□□□ 0.66
TPM4-205ENST00000586833 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
TPM4-205ENST00000586833 NLRP2Q9NX02 1062 aa19.2■□□□□ 0.66
TPM4-205ENST00000586833 PPM1GO15355 546 aaPredicted RBP19.19■□□□□ 0.66
TPM4-205ENST00000586833 GLI3P10071 1580 aa19.19■□□□□ 0.66
TPM4-205ENST00000586833 KRT27Q7Z3Y8 459 aa19.18■□□□□ 0.66
TPM4-205ENST00000586833 LTV1Q96GA3 475 aaPredicted RBP19.18■□□□□ 0.66
TPM4-205ENST00000586833 TNNT2P45379 298 aaPredicted RBP19.17■□□□□ 0.66
TPM4-205ENST00000586833 PDE3BQ13370 1112 aa19.17■□□□□ 0.66
TPM4-205ENST00000586833 AMER1Q5JTC6 1135 aaPredicted RBP19.17■□□□□ 0.66
TPM4-205ENST00000586833 NPC1L1Q9UHC9 1359 aa19.17■□□□□ 0.66
TPM4-205ENST00000586833 PER1O15534 1290 aaPredicted RBP19.16■□□□□ 0.66
TPM4-205ENST00000586833 KIF20BQ96Q89 1820 aa19.16■□□□□ 0.66
TPM4-205ENST00000586833 FBLN1P23142 703 aa19.15■□□□□ 0.66
TPM4-205ENST00000586833 INSRP06213 1382 aa19.15■□□□□ 0.66
TPM4-205ENST00000586833 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
TPM4-205ENST00000586833 EMILIN1Q9Y6C2 1016 aa19.14■□□□□ 0.65
TPM4-205ENST00000586833 DDB1Q16531 1140 aa19.13■□□□□ 0.65
TPM4-205ENST00000586833 POLKQ9UBT6 870 aa19.13■□□□□ 0.65
TPM4-205ENST00000586833 COL18A1P39060 1754 aa19.11■□□□□ 0.65
TPM4-205ENST00000586833 EXOC5O00471 708 aa19.11■□□□□ 0.65
TPM4-205ENST00000586833 IL2RBP14784 551 aa19.11■□□□□ 0.65
TPM4-205ENST00000586833 HSP90AB2PQ58FF8 381 aa19.11■□□□□ 0.65
TPM4-205ENST00000586833 CCDC125Q86Z20 511 aa19.11■□□□□ 0.65
TPM4-205ENST00000586833 SF3B2Q13435 895 aaKnown RBP19.1■□□□□ 0.65
TPM4-205ENST00000586833 FAM196AQ6ZSG2 479 aa19.08■□□□□ 0.64
TPM4-205ENST00000586833 RAPGEF4Q8WZA2 1011 aa19.08■□□□□ 0.64
TPM4-205ENST00000586833 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
TPM4-205ENST00000586833 UPF1Q92900 1129 aaKnown RBP eCLIP19.07■□□□□ 0.64
TPM4-205ENST00000586833 LTN1O94822 1766 aa19.06■□□□□ 0.64
TPM4-205ENST00000586833 THSD7AQ9UPZ6 1657 aa19.05■□□□□ 0.64
TPM4-205ENST00000586833 TATP17735 454 aaPredicted RBP19.04■□□□□ 0.64
TPM4-205ENST00000586833 DDX10Q13206 875 aaKnown RBP19.04■□□□□ 0.64
TPM4-205ENST00000586833 NBPF6Q5VWK0 638 aa19.04■□□□□ 0.64
TPM4-205ENST00000586833 NBPF4Q96M43 638 aa19.04■□□□□ 0.64
TPM4-205ENST00000586833 CFAP53Q96M91 514 aa19.04■□□□□ 0.64
TPM4-205ENST00000586833 ANKRD26Q9UPS8 1709 aa19.04■□□□□ 0.64
TPM4-205ENST00000586833 DISP2A7MBM2 1401 aa19.03■□□□□ 0.64
TPM4-205ENST00000586833 MTHFSP49914 203 aa19.03■□□□□ 0.64
TPM4-205ENST00000586833 FAM208AQ9UK61 1670 aaKnown RBP19.02■□□□□ 0.64
TPM4-205ENST00000586833 ZNF316A6NFI3 1004 aaPredicted RBP19.02■□□□□ 0.64
TPM4-205ENST00000586833 EIF4A2Q14240 407 aaKnown RBP19.02■□□□□ 0.64
TPM4-205ENST00000586833 OVOS2A0A0G2JMS6 1433 aa19.01■□□□□ 0.63
TPM4-205ENST00000586833 TNS2Q63HR2 1409 aa19■□□□□ 0.63
TPM4-205ENST00000586833 ZCRB1Q8TBF4 217 aaKnown RBP19■□□□□ 0.63
TPM4-205ENST00000586833 USHBP1Q8N6Y0 703 aa18.99■□□□□ 0.63
TPM4-205ENST00000586833 EYA1Q99502 592 aa18.99■□□□□ 0.63
TPM4-205ENST00000586833 DIAPH1O60610 1272 aaKnown RBP18.98■□□□□ 0.63
TPM4-205ENST00000586833 BAG6P46379 1132 aa18.98■□□□□ 0.63
TPM4-205ENST00000586833 RALBP1Q15311 655 aa18.98■□□□□ 0.63
TPM4-205ENST00000586833 SPG7Q9UQ90 795 aa18.97■□□□□ 0.63
TPM4-205ENST00000586833 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
TPM4-205ENST00000586833 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
TPM4-205ENST00000586833 PARP4Q9UKK3 1724 aaKnown RBP18.97■□□□□ 0.63
TPM4-205ENST00000586833 PLEKHG2Q9H7P9 1386 aa18.96■□□□□ 0.63
TPM4-205ENST00000586833 FAM182BQ5T319 152 aa18.96■□□□□ 0.63
TPM4-205ENST00000586833 MARCH10Q8NA82 808 aaPredicted RBP18.96■□□□□ 0.63
TPM4-205ENST00000586833 DDX54Q8TDD1 881 aaKnown RBP18.96■□□□□ 0.63
TPM4-205ENST00000586833 IGSF1Q8N6C5 1336 aa18.96■□□□□ 0.63
TPM4-205ENST00000586833 BCL9O00512 1426 aa18.95■□□□□ 0.62
TPM4-205ENST00000586833 PCDH11XQ9BZA7 1347 aa18.95■□□□□ 0.62
TPM4-205ENST00000586833 PCDH11YQ9BZA8 1340 aa18.95■□□□□ 0.62
TPM4-205ENST00000586833 RGPD5Q99666 1765 aa18.94■□□□□ 0.62
TPM4-205ENST00000586833 TRIM37O94972 964 aa18.94■□□□□ 0.62
TPM4-205ENST00000586833 PPP2R1AP30153 589 aa18.94■□□□□ 0.62
TPM4-205ENST00000586833 IL13P35225 146 aa18.94■□□□□ 0.62
TPM4-205ENST00000586833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.94■□□□□ 0.623e-8■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms