RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 ZC3H6P61129 1189 aaKnown RBP24.2■■□□□ 1.46
NDEL1-217ENST00000583683 IP6K1Q92551 441 aa24.19■■□□□ 1.46
NDEL1-217ENST00000583683 EIF4A2Q14240 407 aaKnown RBP24.19■■□□□ 1.46
NDEL1-217ENST00000583683 U2SURPO15042 1029 aaKnown RBP24.18■■□□□ 1.46
NDEL1-217ENST00000583683 U2AF1L5P0DN76 240 aaPredicted RBP24.17■■□□□ 1.46
NDEL1-217ENST00000583683 U2AF1Q01081 240 aaKnown RBP eCLIP24.17■■□□□ 1.461e-9■□□□□ 8.6
NDEL1-217ENST00000583683 CPDO75976 1380 aa24.17■■□□□ 1.46
NDEL1-217ENST00000583683 COL18A1P39060 1754 aa24.17■■□□□ 1.46
NDEL1-217ENST00000583683 RGPD5Q99666 1765 aa24.17■■□□□ 1.46
NDEL1-217ENST00000583683 RGPD1P0DJD0 1748 aa24.17■■□□□ 1.46
NDEL1-217ENST00000583683 ZBTB7CA1YPR0 619 aa24.17■■□□□ 1.46
NDEL1-217ENST00000583683 HNRNPUQ00839 825 aaKnown RBP eCLIP24.16■■□□□ 1.46
NDEL1-217ENST00000583683 KIAA0232Q92628 1395 aa24.15■■□□□ 1.46
NDEL1-217ENST00000583683 HAP1P54257 671 aaPredicted RBP24.13■■□□□ 1.45
NDEL1-217ENST00000583683 ABCC6O95255 1503 aa24.13■■□□□ 1.45
NDEL1-217ENST00000583683 CCDC146Q8IYE0 955 aa24.12■■□□□ 1.45
NDEL1-217ENST00000583683 AXIN2Q9Y2T1 843 aa24.12■■□□□ 1.45
NDEL1-217ENST00000583683 CHRNA2Q15822 529 aa24.1■■□□□ 1.45
NDEL1-217ENST00000583683 LTV1Q96GA3 475 aaPredicted RBP24.09■■□□□ 1.45
NDEL1-217ENST00000583683 LMO7Q8WWI1 1683 aa24.08■■□□□ 1.45
NDEL1-217ENST00000583683 RGPD2P0DJD1 1756 aa24.08■■□□□ 1.45
NDEL1-217ENST00000583683 SENP3-EIF4A1A0A087X0R7 540 aa24.08■■□□□ 1.45
NDEL1-217ENST00000583683 FCHSD2O94868 740 aa24.08■■□□□ 1.45
NDEL1-217ENST00000583683 HMOX1P09601 288 aa24.08■■□□□ 1.45
NDEL1-217ENST00000583683 PRDM11Q9NQV5 511 aa24.08■■□□□ 1.45
NDEL1-217ENST00000583683 PLEKHF1Q96S99 279 aa24.07■■□□□ 1.44
NDEL1-217ENST00000583683 RSPH6AQ9H0K4 717 aa24.07■■□□□ 1.44
NDEL1-217ENST00000583683 RUNDC1Q96C34 613 aa24.07■■□□□ 1.44
NDEL1-217ENST00000583683 EYA1Q99502 592 aa24.07■■□□□ 1.44
NDEL1-217ENST00000583683 IGSF1Q8N6C5 1336 aa24.07■■□□□ 1.44
NDEL1-217ENST00000583683 ANKRD24Q8TF21 1146 aa24.05■■□□□ 1.44
NDEL1-217ENST00000583683 JCADQ9P266 1359 aa24.05■■□□□ 1.44
NDEL1-217ENST00000583683 ERBB3P21860 1342 aa24.05■■□□□ 1.44
NDEL1-217ENST00000583683 SULT6B1Q6IMI4 303 aa24.05■■□□□ 1.44
NDEL1-217ENST00000583683 CAMTA1Q9Y6Y1 1673 aa24.04■■□□□ 1.44
NDEL1-217ENST00000583683 ZBED9Q6R2W3 1325 aa24.04■■□□□ 1.44
NDEL1-217ENST00000583683 APAF1O14727 1248 aa24.04■■□□□ 1.44
NDEL1-217ENST00000583683 AEBP1Q8IUX7 1158 aa24.04■■□□□ 1.44
NDEL1-217ENST00000583683 PNNQ9H307 717 aaKnown RBP24.04■■□□□ 1.44
NDEL1-217ENST00000583683 KDRP35968 1356 aa24.03■■□□□ 1.44
NDEL1-217ENST00000583683 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
NDEL1-217ENST00000583683 HSPA1LP34931 641 aa24.03■■□□□ 1.44
NDEL1-217ENST00000583683 FAM83GA6ND36 823 aa24.03■■□□□ 1.44
NDEL1-217ENST00000583683 NBPF6Q5VWK0 638 aa24.02■■□□□ 1.44
NDEL1-217ENST00000583683 NBPF4Q96M43 638 aa24.02■■□□□ 1.44
NDEL1-217ENST00000583683 FAM208AQ9UK61 1670 aaKnown RBP24.02■■□□□ 1.44
NDEL1-217ENST00000583683 COL14A1Q05707 1796 aaKnown RBP24.01■■□□□ 1.43
NDEL1-217ENST00000583683 TCP11L2Q8N4U5 519 aa24■■□□□ 1.43
NDEL1-217ENST00000583683 SALL2Q9Y467 1007 aaPredicted RBP24■■□□□ 1.43
NDEL1-217ENST00000583683 COL5A2P05997 1499 aaPredicted RBP23.99■■□□□ 1.43
NDEL1-217ENST00000583683 MAPK8IP3Q9UPT6 1336 aa23.99■■□□□ 1.43
NDEL1-217ENST00000583683 NCAPD2Q15021 1401 aa23.98■■□□□ 1.43
NDEL1-217ENST00000583683 PHACTR3Q96KR7 559 aa23.98■■□□□ 1.43
NDEL1-217ENST00000583683 NUTM2BA6NNL0 878 aaPredicted RBP23.97■■□□□ 1.43
NDEL1-217ENST00000583683 NUTM2EB1AL46 878 aaPredicted RBP23.97■■□□□ 1.43
NDEL1-217ENST00000583683 NUTM2AQ8IVF1 878 aaPredicted RBP23.97■■□□□ 1.43
NDEL1-217ENST00000583683 USHBP1Q8N6Y0 703 aa23.97■■□□□ 1.43
NDEL1-217ENST00000583683 ADAMTS2O95450 1211 aa23.96■■□□□ 1.43
NDEL1-217ENST00000583683 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
NDEL1-217ENST00000583683 NEFMP07197 916 aa23.95■■□□□ 1.42
NDEL1-217ENST00000583683 RRP7AQ9Y3A4 280 aaKnown RBP23.95■■□□□ 1.42
NDEL1-217ENST00000583683 CSB-PGBD3P0DP91 1061 aa23.94■■□□□ 1.42
NDEL1-217ENST00000583683 NGEFQ8N5V2 710 aa23.94■■□□□ 1.42
NDEL1-217ENST00000583683 SPATA31A6Q5VVP1 1343 aa23.94■■□□□ 1.42
NDEL1-217ENST00000583683 TMPOP42166 694 aaKnown RBP23.94■■□□□ 1.42
NDEL1-217ENST00000583683 BTG4Q9NY30 223 aa23.94■■□□□ 1.42
NDEL1-217ENST00000583683 WDR17Q8IZU2 1322 aa23.93■■□□□ 1.42
NDEL1-217ENST00000583683 NEUROD2Q15784 382 aa23.93■■□□□ 1.42
NDEL1-217ENST00000583683 NLRP2Q9NX02 1062 aa23.93■■□□□ 1.42
NDEL1-217ENST00000583683 DLG5Q8TDM6 1919 aa23.92■■□□□ 1.42
NDEL1-217ENST00000583683 NCBP3Q53F19 620 aaKnown RBP23.91■■□□□ 1.42
NDEL1-217ENST00000583683 ZNF521Q96K83 1311 aa23.91■■□□□ 1.42
NDEL1-217ENST00000583683 CENPBP07199 599 aaPredicted RBP23.91■■□□□ 1.42
NDEL1-217ENST00000583683 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
NDEL1-217ENST00000583683 LRP6O75581 1613 aa23.9■■□□□ 1.42
NDEL1-217ENST00000583683 NFE2L2Q16236 605 aa23.89■■□□□ 1.42
NDEL1-217ENST00000583683 STRN4Q9NRL3 753 aa23.89■■□□□ 1.42
NDEL1-217ENST00000583683 NRAPQ86VF7 1730 aa23.89■■□□□ 1.42
NDEL1-217ENST00000583683 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
NDEL1-217ENST00000583683 EVA1CP58658 441 aa23.89■■□□□ 1.41
NDEL1-217ENST00000583683 CCDC27Q2M243 656 aa23.89■■□□□ 1.41
NDEL1-217ENST00000583683 RIPK4P57078 832 aa23.88■■□□□ 1.41
NDEL1-217ENST00000583683 LARP1Q6PKG0 1096 aaKnown RBP23.88■■□□□ 1.41
NDEL1-217ENST00000583683 WWC1Q8IX03 1113 aa23.88■■□□□ 1.41
NDEL1-217ENST00000583683 TOM1L2Q6ZVM7 507 aa23.87■■□□□ 1.41
NDEL1-217ENST00000583683 SLIT2O94813 1529 aa23.86■■□□□ 1.41
NDEL1-217ENST00000583683 TRIM35Q9UPQ4 493 aa23.86■■□□□ 1.41
NDEL1-217ENST00000583683 CRB1P82279 1406 aa23.85■■□□□ 1.41
NDEL1-217ENST00000583683 MTHFSDQ2M296 383 aaKnown RBP23.85■■□□□ 1.41
NDEL1-217ENST00000583683 CARD10Q9BWT7 1032 aa23.84■■□□□ 1.41
NDEL1-217ENST00000583683 PDE3BQ13370 1112 aa23.84■■□□□ 1.41
NDEL1-217ENST00000583683 MEGF6O75095 1541 aa23.83■■□□□ 1.4
NDEL1-217ENST00000583683 RAPGEF4Q8WZA2 1011 aa23.82■■□□□ 1.4
NDEL1-217ENST00000583683 CDCA7LQ96GN5 454 aa23.82■■□□□ 1.4
NDEL1-217ENST00000583683 C8orf37Q96NL8 207 aa23.82■■□□□ 1.4
NDEL1-217ENST00000583683 GAS2L2Q8NHY3 880 aa23.81■■□□□ 1.4
NDEL1-217ENST00000583683 GOLGA2Q08379 1002 aa23.8■■□□□ 1.4
NDEL1-217ENST00000583683 PARP4Q9UKK3 1724 aaKnown RBP23.8■■□□□ 1.4
NDEL1-217ENST00000583683 NGLY1Q96IV0 654 aa23.8■■□□□ 1.4
NDEL1-217ENST00000583683 PLEKHG2Q9H7P9 1386 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms