RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.19
MKS1-212ENST00000583577 ATP7BP35670 1465 aa13.89□□□□□ -0.19
MKS1-212ENST00000583577 ZNF526Q8TF50 670 aaPredicted RBP13.89□□□□□ -0.19
MKS1-212ENST00000583577 PRR36Q9H6K5 1346 aa13.89□□□□□ -0.19
MKS1-212ENST00000583577 DDB1Q16531 1140 aa13.88□□□□□ -0.19
MKS1-212ENST00000583577 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
MKS1-212ENST00000583577 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
MKS1-212ENST00000583577 TOPAZ1Q8N9V7 1692 aa13.87□□□□□ -0.19
MKS1-212ENST00000583577 MIER1Q8N108 512 aa13.86□□□□□ -0.19
MKS1-212ENST00000583577 NLGN2Q8NFZ4 835 aa13.86□□□□□ -0.19
MKS1-212ENST00000583577 GRIN3BO60391 1043 aa13.85□□□□□ -0.19
MKS1-212ENST00000583577 YBX3P16989 372 aaKnown RBP eCLIP13.85□□□□□ -0.19
MKS1-212ENST00000583577 COL13A1Q5TAT6 717 aaPredicted RBP13.85□□□□□ -0.19
MKS1-212ENST00000583577 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
MKS1-212ENST00000583577 WNK3Q9BYP7 1800 aa13.85□□□□□ -0.19
MKS1-212ENST00000583577 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
MKS1-212ENST00000583577 CFAP70Q5T0N1 1121 aa13.84□□□□□ -0.19
MKS1-212ENST00000583577 MARCH10Q8NA82 808 aaPredicted RBP13.84□□□□□ -0.19
MKS1-212ENST00000583577 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
MKS1-212ENST00000583577 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
MKS1-212ENST00000583577 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.19
MKS1-212ENST00000583577 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
MKS1-212ENST00000583577 POLD1P28340 1107 aa13.83□□□□□ -0.2
MKS1-212ENST00000583577 C14orf93Q9H972 538 aaKnown RBP13.83□□□□□ -0.2
MKS1-212ENST00000583577 CRB1P82279 1406 aa13.82□□□□□ -0.2
MKS1-212ENST00000583577 PRELPP51888 382 aa13.81□□□□□ -0.2
MKS1-212ENST00000583577 TNS4Q8IZW8 715 aa13.81□□□□□ -0.2
MKS1-212ENST00000583577 PAPPAQ13219 1627 aa13.8□□□□□ -0.2
MKS1-212ENST00000583577 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
MKS1-212ENST00000583577 APLP1P51693 650 aa13.8□□□□□ -0.2
MKS1-212ENST00000583577 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
MKS1-212ENST00000583577 STAC3Q96MF2 364 aa13.8□□□□□ -0.2
MKS1-212ENST00000583577 SIN3AQ96ST3 1273 aa13.8□□□□□ -0.2
MKS1-212ENST00000583577 CPDO75976 1380 aa13.8□□□□□ -0.2
MKS1-212ENST00000583577 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
MKS1-212ENST00000583577 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
MKS1-212ENST00000583577 TOM1L2Q6ZVM7 507 aa13.79□□□□□ -0.2
MKS1-212ENST00000583577 DNAJC5GQ8N7S2 189 aa13.79□□□□□ -0.2
MKS1-212ENST00000583577 ABTB2Q8N961 1025 aa13.79□□□□□ -0.2
MKS1-212ENST00000583577 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
MKS1-212ENST00000583577 AATKQ6ZMQ8 1374 aa13.79□□□□□ -0.2
MKS1-212ENST00000583577 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
MKS1-212ENST00000583577 TUBGCP6Q96RT7 1819 aa13.78□□□□□ -0.2
MKS1-212ENST00000583577 BCL9O00512 1426 aa13.77□□□□□ -0.21
MKS1-212ENST00000583577 BTAF1O14981 1849 aa13.77□□□□□ -0.21
MKS1-212ENST00000583577 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
MKS1-212ENST00000583577 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
MKS1-212ENST00000583577 NHSQ6T4R5 1651 aa13.76□□□□□ -0.21
MKS1-212ENST00000583577 SLC34A2O95436 690 aa13.76□□□□□ -0.21
MKS1-212ENST00000583577 ADCY9O60503 1353 aa13.75□□□□□ -0.21
MKS1-212ENST00000583577 GCP02774 474 aa13.75□□□□□ -0.21
MKS1-212ENST00000583577 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
MKS1-212ENST00000583577 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
MKS1-212ENST00000583577 ACSBG1Q96GR2 724 aa13.75□□□□□ -0.21
MKS1-212ENST00000583577 KIAA1210Q9ULL0 1709 aa13.75□□□□□ -0.21
MKS1-212ENST00000583577 USP19O94966 1318 aa13.74□□□□□ -0.21
MKS1-212ENST00000583577 WDR90Q96KV7 1748 aa13.74□□□□□ -0.21
MKS1-212ENST00000583577 KIF3CO14782 793 aa13.74□□□□□ -0.21
MKS1-212ENST00000583577 TONSLQ96HA7 1378 aa13.73□□□□□ -0.21
MKS1-212ENST00000583577 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
MKS1-212ENST00000583577 ACEP12821 1306 aa13.72□□□□□ -0.21
MKS1-212ENST00000583577 EXOC5O00471 708 aa13.72□□□□□ -0.21
MKS1-212ENST00000583577 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
MKS1-212ENST00000583577 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
MKS1-212ENST00000583577 LRRC4BQ9NT99 713 aa13.72□□□□□ -0.21
MKS1-212ENST00000583577 PNPLA7Q6ZV29 1317 aa13.71□□□□□ -0.21
MKS1-212ENST00000583577 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
MKS1-212ENST00000583577 COL18A1P39060 1754 aa13.7□□□□□ -0.22
MKS1-212ENST00000583577 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
MKS1-212ENST00000583577 HTRA3P83110 453 aa13.69□□□□□ -0.22
MKS1-212ENST00000583577 TFCP2L1Q9NZI6 479 aa13.69□□□□□ -0.22
MKS1-212ENST00000583577 ARHGEF28Q8N1W1 1705 aaKnown RBP13.69□□□□□ -0.22
MKS1-212ENST00000583577 BRD4O60885 1362 aaPredicted RBP13.69□□□□□ -0.22
MKS1-212ENST00000583577 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
MKS1-212ENST00000583577 USP6P35125 1406 aa13.68□□□□□ -0.22
MKS1-212ENST00000583577 POLR3AO14802 1390 aaPredicted RBP13.68□□□□□ -0.22
MKS1-212ENST00000583577 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
MKS1-212ENST00000583577 MSH5O43196 834 aa13.67□□□□□ -0.22
MKS1-212ENST00000583577 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
MKS1-212ENST00000583577 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
MKS1-212ENST00000583577 YTHDC1Q96MU7 727 aaKnown RBP13.67□□□□□ -0.22
MKS1-212ENST00000583577 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
MKS1-212ENST00000583577 AXIN2Q9Y2T1 843 aa13.67□□□□□ -0.22
MKS1-212ENST00000583577 TOMM70O94826 608 aa13.66□□□□□ -0.22
MKS1-212ENST00000583577 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
MKS1-212ENST00000583577 KCNQ4P56696 695 aa13.65□□□□□ -0.22
MKS1-212ENST00000583577 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
MKS1-212ENST00000583577 JMYQ8N9B5 988 aa13.65□□□□□ -0.22
MKS1-212ENST00000583577 CARD10Q9BWT7 1032 aa13.65□□□□□ -0.22
MKS1-212ENST00000583577 TNS2Q63HR2 1409 aa13.64□□□□□ -0.23
MKS1-212ENST00000583577 NLRP6P59044 892 aa13.64□□□□□ -0.23
MKS1-212ENST00000583577 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
MKS1-212ENST00000583577 PLEKHG3A1L390 1219 aa13.63□□□□□ -0.23
MKS1-212ENST00000583577 CCER2I3L3R5 266 aa13.62□□□□□ -0.23
MKS1-212ENST00000583577 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
MKS1-212ENST00000583577 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
MKS1-212ENST00000583577 SLIT3O75094 1523 aa13.6□□□□□ -0.23
MKS1-212ENST00000583577 NBPF1Q3BBV0 1214 aa13.6□□□□□ -0.23
MKS1-212ENST00000583577 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
MKS1-212ENST00000583577 ABCC6O95255 1503 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms