RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 STRN4Q9NRL3 753 aa21.11■□□□□ 0.97
SLC6A4-205ENST00000579221 HOXC9P31274 260 aa21.1■□□□□ 0.97
SLC6A4-205ENST00000579221 EMILIN1Q9Y6C2 1016 aa21.1■□□□□ 0.97
SLC6A4-205ENST00000579221 KIF24Q5T7B8 1368 aa21.1■□□□□ 0.97
SLC6A4-205ENST00000579221 VPS72Q15906 364 aa21.09■□□□□ 0.97
SLC6A4-205ENST00000579221 CCDC9Q9Y3X0 531 aaKnown RBP21.09■□□□□ 0.97
SLC6A4-205ENST00000579221 ANKRD26Q9UPS8 1709 aa21.09■□□□□ 0.97
SLC6A4-205ENST00000579221 CSB-PGBD3P0DP91 1061 aa21.08■□□□□ 0.97
SLC6A4-205ENST00000579221 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
SLC6A4-205ENST00000579221 RTL1A6NKG5 1358 aa21.08■□□□□ 0.96
SLC6A4-205ENST00000579221 BLMP54132 1417 aaPredicted RBP21.06■□□□□ 0.96
SLC6A4-205ENST00000579221 ABCC6O95255 1503 aa21.06■□□□□ 0.96
SLC6A4-205ENST00000579221 RALBP1Q15311 655 aa21.06■□□□□ 0.96
SLC6A4-205ENST00000579221 POTEAQ6S8J7 498 aa21.06■□□□□ 0.96
SLC6A4-205ENST00000579221 ANKRD24Q8TF21 1146 aa21.06■□□□□ 0.96
SLC6A4-205ENST00000579221 FLT4P35916 1363 aa21.06■□□□□ 0.96
SLC6A4-205ENST00000579221 NWD2Q9ULI1 1742 aa21.05■□□□□ 0.96
SLC6A4-205ENST00000579221 MTHFSP49914 203 aa21.05■□□□□ 0.96
SLC6A4-205ENST00000579221 HSP90AB2PQ58FF8 381 aa21.05■□□□□ 0.96
SLC6A4-205ENST00000579221 LARP1Q6PKG0 1096 aaKnown RBP21.05■□□□□ 0.96
SLC6A4-205ENST00000579221 LTV1Q96GA3 475 aaPredicted RBP21.05■□□□□ 0.96
SLC6A4-205ENST00000579221 GJD4Q96KN9 370 aaPredicted RBP21.05■□□□□ 0.96
SLC6A4-205ENST00000579221 PLCH1Q4KWH8 1693 aa21.05■□□□□ 0.96
SLC6A4-205ENST00000579221 LMO7Q8WWI1 1683 aa21.05■□□□□ 0.96
SLC6A4-205ENST00000579221 ATRNO75882 1429 aa21.04■□□□□ 0.96
SLC6A4-205ENST00000579221 RXRBP28702 533 aa21.04■□□□□ 0.96
SLC6A4-205ENST00000579221 RBM6P78332 1123 aaKnown RBP21.04■□□□□ 0.96
SLC6A4-205ENST00000579221 TOM1L2Q6ZVM7 507 aa21.04■□□□□ 0.96
SLC6A4-205ENST00000579221 COL5A2P05997 1499 aaPredicted RBP21.04■□□□□ 0.96
SLC6A4-205ENST00000579221 COL18A1P39060 1754 aa21.04■□□□□ 0.96
SLC6A4-205ENST00000579221 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
SLC6A4-205ENST00000579221 INSRP06213 1382 aa21.03■□□□□ 0.96
SLC6A4-205ENST00000579221 PPP2R1AP30153 589 aa21.02■□□□□ 0.96
SLC6A4-205ENST00000579221 LTN1O94822 1766 aa21.02■□□□□ 0.96
SLC6A4-205ENST00000579221 ERBB3P21860 1342 aa21.02■□□□□ 0.95
SLC6A4-205ENST00000579221 SPATA31A5Q5VU36 1347 aa21.02■□□□□ 0.95
SLC6A4-205ENST00000579221 SPATA31A7Q8IWB4 1347 aa21.02■□□□□ 0.95
SLC6A4-205ENST00000579221 PARD3Q8TEW0 1356 aa21.01■□□□□ 0.95
SLC6A4-205ENST00000579221 NLRP2Q9NX02 1062 aa21.01■□□□□ 0.95
SLC6A4-205ENST00000579221 CARD10Q9BWT7 1032 aa21■□□□□ 0.95
SLC6A4-205ENST00000579221 USP35Q9P2H5 1018 aa21■□□□□ 0.95
SLC6A4-205ENST00000579221 SPATA31A1Q5TZJ5 1347 aa21■□□□□ 0.95
SLC6A4-205ENST00000579221 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
SLC6A4-205ENST00000579221 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.99■□□□□ 0.95
SLC6A4-205ENST00000579221 CRB1P82279 1406 aa20.99■□□□□ 0.95
SLC6A4-205ENST00000579221 SMG6Q86US8 1419 aaKnown RBP20.99■□□□□ 0.95
SLC6A4-205ENST00000579221 THRAP3Q9Y2W1 955 aaKnown RBP20.99■□□□□ 0.95
SLC6A4-205ENST00000579221 TCP11L2Q8N4U5 519 aa20.98■□□□□ 0.95
SLC6A4-205ENST00000579221 CFAP53Q96M91 514 aa20.98■□□□□ 0.95
SLC6A4-205ENST00000579221 PRKRIP1Q9H875 184 aaPredicted RBP20.98■□□□□ 0.95
SLC6A4-205ENST00000579221 NRAPQ86VF7 1730 aa20.98■□□□□ 0.95
SLC6A4-205ENST00000579221 ANP32CO43423 234 aa20.97■□□□□ 0.95
SLC6A4-205ENST00000579221 PEAK1Q9H792 1746 aa20.96■□□□□ 0.95
SLC6A4-205ENST00000579221 EIF4A2Q14240 407 aaKnown RBP20.96■□□□□ 0.95
SLC6A4-205ENST00000579221 BARGINQ6ZT62 677 aa20.95■□□□□ 0.94
SLC6A4-205ENST00000579221 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.94
SLC6A4-205ENST00000579221 RGPD5Q99666 1765 aa20.95■□□□□ 0.94
SLC6A4-205ENST00000579221 CDK12Q9NYV4 1490 aaPredicted RBP20.94■□□□□ 0.94
SLC6A4-205ENST00000579221 ONECUT3O60422 494 aaPredicted RBP20.94■□□□□ 0.94
SLC6A4-205ENST00000579221 DIAPH1O60610 1272 aaKnown RBP20.94■□□□□ 0.94
SLC6A4-205ENST00000579221 FAM98CQ17RN3 349 aaKnown RBP20.94■□□□□ 0.94
SLC6A4-205ENST00000579221 NBPF6Q5VWK0 638 aa20.94■□□□□ 0.94
SLC6A4-205ENST00000579221 NBPF4Q96M43 638 aa20.94■□□□□ 0.94
SLC6A4-205ENST00000579221 IL13P35225 146 aa20.92■□□□□ 0.94
SLC6A4-205ENST00000579221 EYA1Q99502 592 aa20.92■□□□□ 0.94
SLC6A4-205ENST00000579221 A0A0G2JS52 829 aa20.91■□□□□ 0.94
SLC6A4-205ENST00000579221 MYT1Q01538 1121 aa20.91■□□□□ 0.94
SLC6A4-205ENST00000579221 CDCA7Q9BWT1 371 aaPredicted RBP20.91■□□□□ 0.94
SLC6A4-205ENST00000579221 SEPT12Q8IYM1 358 aa20.9■□□□□ 0.94
SLC6A4-205ENST00000579221 GLI3P10071 1580 aa20.89■□□□□ 0.94
SLC6A4-205ENST00000579221 NUDCQ9Y266 331 aa20.89■□□□□ 0.93
SLC6A4-205ENST00000579221 IL2RBP14784 551 aa20.88■□□□□ 0.93
SLC6A4-205ENST00000579221 USHBP1Q8N6Y0 703 aa20.88■□□□□ 0.93
SLC6A4-205ENST00000579221 RAPGEF4Q8WZA2 1011 aa20.86■□□□□ 0.93
SLC6A4-205ENST00000579221 IGSF1Q8N6C5 1336 aa20.85■□□□□ 0.93
SLC6A4-205ENST00000579221 EXOC5O00471 708 aa20.85■□□□□ 0.93
SLC6A4-205ENST00000579221 U2SURPO15042 1029 aaKnown RBP20.85■□□□□ 0.93
SLC6A4-205ENST00000579221 TATP17735 454 aaPredicted RBP20.85■□□□□ 0.93
SLC6A4-205ENST00000579221 DIEXFQ68CQ4 756 aaKnown RBP20.85■□□□□ 0.93
SLC6A4-205ENST00000579221 FAM208AQ9UK61 1670 aaKnown RBP20.85■□□□□ 0.93
SLC6A4-205ENST00000579221 PDE3BQ13370 1112 aa20.83■□□□□ 0.93
SLC6A4-205ENST00000579221 DDB1Q16531 1140 aa20.83■□□□□ 0.93
SLC6A4-205ENST00000579221 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
SLC6A4-205ENST00000579221 RGS12O14924 1447 aa20.82■□□□□ 0.92
SLC6A4-205ENST00000579221 COL3A1P02461 1466 aaPredicted RBP20.81■□□□□ 0.92
SLC6A4-205ENST00000579221 KRT27Q7Z3Y8 459 aa20.81■□□□□ 0.92
SLC6A4-205ENST00000579221 DISP2A7MBM2 1401 aa20.8■□□□□ 0.92
SLC6A4-205ENST00000579221 U2AF1L5P0DN76 240 aaPredicted RBP20.8■□□□□ 0.92
SLC6A4-205ENST00000579221 U2AF1Q01081 240 aaKnown RBP eCLIP20.8■□□□□ 0.92
SLC6A4-205ENST00000579221 ILDR2Q71H61 639 aa20.8■□□□□ 0.92
SLC6A4-205ENST00000579221 NCAPD2Q15021 1401 aa20.79■□□□□ 0.92
SLC6A4-205ENST00000579221 HMOX1P09601 288 aa20.79■□□□□ 0.92
SLC6A4-205ENST00000579221 ZCRB1Q8TBF4 217 aaKnown RBP20.79■□□□□ 0.92
SLC6A4-205ENST00000579221 RGPD2P0DJD1 1756 aa20.78■□□□□ 0.92
SLC6A4-205ENST00000579221 AEBP1Q8IUX7 1158 aa20.78■□□□□ 0.92
SLC6A4-205ENST00000579221 SPG7Q9UQ90 795 aa20.77■□□□□ 0.92
SLC6A4-205ENST00000579221 PLEKHO1Q53GL0 409 aaPredicted RBP20.76■□□□□ 0.91
SLC6A4-205ENST00000579221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.91
SLC6A4-205ENST00000579221 THSD7AQ9UPZ6 1657 aa20.76■□□□□ 0.91
SLC6A4-205ENST00000579221 KDRP35968 1356 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms