RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TXNRD1Q16881 649 aa14.69□□□□□ -0.06
NPLOC4-220ENST00000576940 ZNF784Q8NCA9 323 aaPredicted RBP14.69□□□□□ -0.06
NPLOC4-220ENST00000576940 WDR17Q8IZU2 1322 aa14.68□□□□□ -0.06
NPLOC4-220ENST00000576940 CENPJQ9HC77 1338 aaPredicted RBP14.68□□□□□ -0.06
NPLOC4-220ENST00000576940 SOX12O15370 315 aa14.68□□□□□ -0.06
NPLOC4-220ENST00000576940 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
NPLOC4-220ENST00000576940 SYT17Q9BSW7 474 aa14.68□□□□□ -0.06
NPLOC4-220ENST00000576940 STK32BQ9NY57 414 aa14.68□□□□□ -0.06
NPLOC4-220ENST00000576940 LRRC37A3O60309 1634 aa14.67□□□□□ -0.06
NPLOC4-220ENST00000576940 EXOC5O00471 708 aa14.67□□□□□ -0.06
NPLOC4-220ENST00000576940 CSB-PGBD3P0DP91 1061 aa14.67□□□□□ -0.06
NPLOC4-220ENST00000576940 FHDC1Q9C0D6 1143 aaPredicted RBP14.67□□□□□ -0.06
NPLOC4-220ENST00000576940 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
NPLOC4-220ENST00000576940 USP6P35125 1406 aa14.66□□□□□ -0.06
NPLOC4-220ENST00000576940 BRD4O60885 1362 aaPredicted RBP14.66□□□□□ -0.06
NPLOC4-220ENST00000576940 ARHGEF25Q86VW2 580 aa14.66□□□□□ -0.06
NPLOC4-220ENST00000576940 CDCA7Q9BWT1 371 aaPredicted RBP14.66□□□□□ -0.06
NPLOC4-220ENST00000576940 COL18A1P39060 1754 aa14.65□□□□□ -0.06
NPLOC4-220ENST00000576940 CARD10Q9BWT7 1032 aa14.65□□□□□ -0.06
NPLOC4-220ENST00000576940 SLIT3O75094 1523 aa14.65□□□□□ -0.06
NPLOC4-220ENST00000576940 RGPD3A6NKT7 1758 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-220ENST00000576940 RGPD4Q7Z3J3 1758 aa14.64□□□□□ -0.07
NPLOC4-220ENST00000576940 MYOM1P52179 1685 aa14.64□□□□□ -0.07
NPLOC4-220ENST00000576940 ACSBG1Q96GR2 724 aa14.63□□□□□ -0.07
NPLOC4-220ENST00000576940 SGIP1Q9BQI5 828 aa14.63□□□□□ -0.07
NPLOC4-220ENST00000576940 MTFR1LQ9H019 292 aa14.63□□□□□ -0.07
NPLOC4-220ENST00000576940 BCL9O00512 1426 aa14.63□□□□□ -0.07
NPLOC4-220ENST00000576940 KIAA1210Q9ULL0 1709 aa14.63□□□□□ -0.07
NPLOC4-220ENST00000576940 TTC21BQ7Z4L5 1316 aa14.63□□□□□ -0.07
NPLOC4-220ENST00000576940 KCNH5Q8NCM2 988 aa14.62□□□□□ -0.07
NPLOC4-220ENST00000576940 CPSF1Q10570 1443 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-220ENST00000576940 RGPD5Q99666 1765 aa14.61□□□□□ -0.07
NPLOC4-220ENST00000576940 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
NPLOC4-220ENST00000576940 SENP3-EIF4A1A0A087X0R7 540 aa14.6□□□□□ -0.07
NPLOC4-220ENST00000576940 ARXQ96QS3 562 aa14.6□□□□□ -0.07
NPLOC4-220ENST00000576940 PIK3C2AO00443 1686 aa14.6□□□□□ -0.07
NPLOC4-220ENST00000576940 EVC2Q86UK5 1308 aa14.6□□□□□ -0.07
NPLOC4-220ENST00000576940 AKAP12Q02952 1782 aa14.59□□□□□ -0.07
NPLOC4-220ENST00000576940 WNK3Q9BYP7 1800 aa14.58□□□□□ -0.08
NPLOC4-220ENST00000576940 C1QTNF8P60827 252 aa14.58□□□□□ -0.08
NPLOC4-220ENST00000576940 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.08
NPLOC4-220ENST00000576940 ZNF827Q17R98 1081 aa14.56□□□□□ -0.08
NPLOC4-220ENST00000576940 L3MBTL2Q969R5 705 aa14.56□□□□□ -0.08
NPLOC4-220ENST00000576940 LRRC4BQ9NT99 713 aa14.56□□□□□ -0.08
NPLOC4-220ENST00000576940 NLRP2Q9NX02 1062 aa14.56□□□□□ -0.08
NPLOC4-220ENST00000576940 CCDC7Q96M83 1385 aa14.56□□□□□ -0.08
NPLOC4-220ENST00000576940 GPR162Q16538 588 aa14.55□□□□□ -0.08
NPLOC4-220ENST00000576940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.55□□□□□ -0.08
NPLOC4-220ENST00000576940 TTC21AQ8NDW8 1320 aa14.55□□□□□ -0.08
NPLOC4-220ENST00000576940 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
NPLOC4-220ENST00000576940 KAT6BQ8WYB5 2073 aa14.54□□□□□ -0.08
NPLOC4-220ENST00000576940 CHD4Q14839 1912 aa14.53□□□□□ -0.08
NPLOC4-220ENST00000576940 TNS2Q63HR2 1409 aa14.53□□□□□ -0.08
NPLOC4-220ENST00000576940 KTN1Q86UP2 1357 aaKnown RBP14.53□□□□□ -0.08
NPLOC4-220ENST00000576940 IL2RBP14784 551 aa14.53□□□□□ -0.08
NPLOC4-220ENST00000576940 GOLGB1Q14789 3259 aaKnown RBP14.52□□□□□ -0.08
NPLOC4-220ENST00000576940 NME9Q86XW9 330 aa14.52□□□□□ -0.09
NPLOC4-220ENST00000576940 NFAT5O94916 1531 aa14.51□□□□□ -0.09
NPLOC4-220ENST00000576940 ERBB3P21860 1342 aa14.51□□□□□ -0.09
NPLOC4-220ENST00000576940 KCNQ4P56696 695 aa14.51□□□□□ -0.09
NPLOC4-220ENST00000576940 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
NPLOC4-220ENST00000576940 ANKRD24Q8TF21 1146 aa14.51□□□□□ -0.09
NPLOC4-220ENST00000576940 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
NPLOC4-220ENST00000576940 SIN3AQ96ST3 1273 aa14.51□□□□□ -0.09
NPLOC4-220ENST00000576940 NHSQ6T4R5 1651 aa14.5□□□□□ -0.09
NPLOC4-220ENST00000576940 DDX54Q8TDD1 881 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-220ENST00000576940 TRPM1Q7Z4N2 1603 aa14.5□□□□□ -0.09
NPLOC4-220ENST00000576940 MAP3K5Q99683 1374 aa14.49□□□□□ -0.09
NPLOC4-220ENST00000576940 PAPPAQ13219 1627 aa14.48□□□□□ -0.09
NPLOC4-220ENST00000576940 POLD1P28340 1107 aa14.48□□□□□ -0.09
NPLOC4-220ENST00000576940 TMC1Q8TDI8 760 aa14.48□□□□□ -0.09
NPLOC4-220ENST00000576940 SLC16A10Q8TF71 515 aa14.48□□□□□ -0.09
NPLOC4-220ENST00000576940 BTAF1O14981 1849 aa14.48□□□□□ -0.09
NPLOC4-220ENST00000576940 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
NPLOC4-220ENST00000576940 PNPLA7Q6ZV29 1317 aa14.47□□□□□ -0.09
NPLOC4-220ENST00000576940 GIGYF1O75420 1035 aaPredicted RBP14.47□□□□□ -0.09
NPLOC4-220ENST00000576940 NEUROD1Q13562 356 aa14.47□□□□□ -0.09
NPLOC4-220ENST00000576940 NLGN2Q8NFZ4 835 aa14.47□□□□□ -0.09
NPLOC4-220ENST00000576940 LTV1Q96GA3 475 aaPredicted RBP14.47□□□□□ -0.09
NPLOC4-220ENST00000576940 ROCK2O75116 1388 aaKnown RBP14.47□□□□□ -0.09
NPLOC4-220ENST00000576940 ABCC6O95255 1503 aa14.46□□□□□ -0.09
NPLOC4-220ENST00000576940 SLC27A3Q5K4L6 730 aa14.46□□□□□ -0.09
NPLOC4-220ENST00000576940 SYTL4Q96C24 671 aaPredicted RBP14.46□□□□□ -0.09
NPLOC4-220ENST00000576940 SLC12A5Q9H2X9 1139 aa14.46□□□□□ -0.09
NPLOC4-220ENST00000576940 TFCP2L1Q9NZI6 479 aa14.46□□□□□ -0.09
NPLOC4-220ENST00000576940 PRIM1P49642 420 aaKnown RBP14.45□□□□□ -0.1
NPLOC4-220ENST00000576940 SBNO2Q9Y2G9 1366 aa14.45□□□□□ -0.1
NPLOC4-220ENST00000576940 YBX3P16989 372 aaKnown RBP eCLIP14.43□□□□□ -0.1
NPLOC4-220ENST00000576940 FBLN1P23142 703 aa14.43□□□□□ -0.1
NPLOC4-220ENST00000576940 IP6K1Q92551 441 aa14.43□□□□□ -0.1
NPLOC4-220ENST00000576940 CD163L1Q9NR16 1453 aa14.43□□□□□ -0.1
NPLOC4-220ENST00000576940 IFFO2Q5TF58 517 aa14.42□□□□□ -0.1
NPLOC4-220ENST00000576940 HDGFL2Q7Z4V5 671 aaPredicted RBP14.42□□□□□ -0.1
NPLOC4-220ENST00000576940 LTN1O94822 1766 aa14.42□□□□□ -0.1
NPLOC4-220ENST00000576940 MON2Q7Z3U7 1717 aa14.41□□□□□ -0.1
NPLOC4-220ENST00000576940 MSH5O43196 834 aa14.41□□□□□ -0.1
NPLOC4-220ENST00000576940 COL23A1Q86Y22 540 aaPredicted RBP14.41□□□□□ -0.1
NPLOC4-220ENST00000576940 CEP350Q5VT06 3117 aa14.4□□□□□ -0.1
NPLOC4-220ENST00000576940 GRIN3BO60391 1043 aa14.39□□□□□ -0.11
NPLOC4-220ENST00000576940 ZCRB1Q8TBF4 217 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms