RNA–Protein interactions for RNA: ENST00000576069.5

SPNS3-206, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-206ENST00000576069 AXIN2Q9Y2T1 843 aa26.68■■□□□ 1.86
SPNS3-206ENST00000576069 RGS12O14924 1447 aa26.66■■□□□ 1.86
SPNS3-206ENST00000576069 GLI3P10071 1580 aa26.66■■□□□ 1.86
SPNS3-206ENST00000576069 LARP1Q6PKG0 1096 aaKnown RBP26.65■■□□□ 1.86
SPNS3-206ENST00000576069 COL5A2P05997 1499 aaPredicted RBP26.65■■□□□ 1.86
SPNS3-206ENST00000576069 COL18A1P39060 1754 aa26.65■■□□□ 1.86
SPNS3-206ENST00000576069 ABCC6O95255 1503 aa26.65■■□□□ 1.86
SPNS3-206ENST00000576069 SPATA31A1Q5TZJ5 1347 aa26.65■■□□□ 1.86
SPNS3-206ENST00000576069 KNSTRNQ9Y448 316 aa26.62■■□□□ 1.85
SPNS3-206ENST00000576069 KIF20BQ96Q89 1820 aa26.61■■□□□ 1.85
SPNS3-206ENST00000576069 IP6K1Q92551 441 aa26.61■■□□□ 1.85
SPNS3-206ENST00000576069 FBLN1P23142 703 aa26.6■■□□□ 1.85
SPNS3-206ENST00000576069 MAP3K19Q56UN5 1328 aa26.6■■□□□ 1.85
SPNS3-206ENST00000576069 WDR17Q8IZU2 1322 aa26.6■■□□□ 1.85
SPNS3-206ENST00000576069 FAM98CQ17RN3 349 aaKnown RBP26.59■■□□□ 1.85
SPNS3-206ENST00000576069 SEPT12Q8IYM1 358 aa26.59■■□□□ 1.85
SPNS3-206ENST00000576069 THRAP3Q9Y2W1 955 aaKnown RBP26.59■■□□□ 1.85
SPNS3-206ENST00000576069 NSD2O96028 1365 aa26.58■■□□□ 1.85
SPNS3-206ENST00000576069 CRB1P82279 1406 aa26.58■■□□□ 1.85
SPNS3-206ENST00000576069 PER1O15534 1290 aaPredicted RBP26.58■■□□□ 1.85
SPNS3-206ENST00000576069 AMPHP49418 695 aa26.57■■□□□ 1.84
SPNS3-206ENST00000576069 BARGINQ6ZT62 677 aa26.57■■□□□ 1.84
SPNS3-206ENST00000576069 TOM1L2Q6ZVM7 507 aa26.57■■□□□ 1.84
SPNS3-206ENST00000576069 TCP11L2Q8N4U5 519 aa26.57■■□□□ 1.84
SPNS3-206ENST00000576069 BLMP54132 1417 aaPredicted RBP26.56■■□□□ 1.84
SPNS3-206ENST00000576069 RRS1Q15050 365 aaKnown RBP26.56■■□□□ 1.84
SPNS3-206ENST00000576069 USP35Q9P2H5 1018 aa26.56■■□□□ 1.84
SPNS3-206ENST00000576069 CSB-PGBD3P0DP91 1061 aa26.55■■□□□ 1.84
SPNS3-206ENST00000576069 HOXC9P31274 260 aa26.55■■□□□ 1.84
SPNS3-206ENST00000576069 LTN1O94822 1766 aa26.55■■□□□ 1.84
SPNS3-206ENST00000576069 AMER1Q5JTC6 1135 aaPredicted RBP26.54■■□□□ 1.84
SPNS3-206ENST00000576069 CARD10Q9BWT7 1032 aa26.54■■□□□ 1.84
SPNS3-206ENST00000576069 ERBB3P21860 1342 aa26.54■■□□□ 1.84
SPNS3-206ENST00000576069 RTL1A6NKG5 1358 aa26.54■■□□□ 1.84
SPNS3-206ENST00000576069 ANKRD24Q8TF21 1146 aa26.53■■□□□ 1.84
SPNS3-206ENST00000576069 KIF24Q5T7B8 1368 aa26.53■■□□□ 1.84
SPNS3-206ENST00000576069 A0A0G2JS52 829 aa26.51■■□□□ 1.83
SPNS3-206ENST00000576069 MYT1Q01538 1121 aa26.51■■□□□ 1.83
SPNS3-206ENST00000576069 MORC1Q86VD1 984 aa26.5■■□□□ 1.83
SPNS3-206ENST00000576069 RGPD5Q99666 1765 aa26.5■■□□□ 1.83
SPNS3-206ENST00000576069 KRT27Q7Z3Y8 459 aa26.48■■□□□ 1.83
SPNS3-206ENST00000576069 FLT4P35916 1363 aa26.47■■□□□ 1.83
SPNS3-206ENST00000576069 NLRP2Q9NX02 1062 aa26.47■■□□□ 1.83
SPNS3-206ENST00000576069 POLKQ9UBT6 870 aa26.47■■□□□ 1.83
SPNS3-206ENST00000576069 EMILIN1Q9Y6C2 1016 aa26.47■■□□□ 1.83
SPNS3-206ENST00000576069 ANKRD26Q9UPS8 1709 aa26.46■■□□□ 1.83
SPNS3-206ENST00000576069 TNNT2P45379 298 aaPredicted RBP26.46■■□□□ 1.83
SPNS3-206ENST00000576069 CDCA7Q9BWT1 371 aaPredicted RBP26.46■■□□□ 1.83
SPNS3-206ENST00000576069 THSD7AQ9UPZ6 1657 aa26.46■■□□□ 1.83
SPNS3-206ENST00000576069 INSRP06213 1382 aa26.46■■□□□ 1.83
SPNS3-206ENST00000576069 NPC1L1Q9UHC9 1359 aa26.46■■□□□ 1.83
SPNS3-206ENST00000576069 HSP90AB2PQ58FF8 381 aa26.45■■□□□ 1.82
SPNS3-206ENST00000576069 LTV1Q96GA3 475 aaPredicted RBP26.45■■□□□ 1.82
SPNS3-206ENST00000576069 UPF1Q92900 1129 aaKnown RBP eCLIP26.43■■□□□ 1.82
SPNS3-206ENST00000576069 PPM1GO15355 546 aaPredicted RBP26.42■■□□□ 1.82
SPNS3-206ENST00000576069 BRWD3Q6RI45 1802 aa26.4■■□□□ 1.82
SPNS3-206ENST00000576069 CC2D1BQ5T0F9 858 aaKnown RBP26.4■■□□□ 1.82
SPNS3-206ENST00000576069 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.82
SPNS3-206ENST00000576069 PDE3BQ13370 1112 aa26.39■■□□□ 1.82
SPNS3-206ENST00000576069 PEAK1Q9H792 1746 aa26.39■■□□□ 1.81
SPNS3-206ENST00000576069 DDB1Q16531 1140 aa26.38■■□□□ 1.81
SPNS3-206ENST00000576069 DISP2A7MBM2 1401 aa26.38■■□□□ 1.81
SPNS3-206ENST00000576069 MAP2P11137 1827 aaKnown RBP26.37■■□□□ 1.81
SPNS3-206ENST00000576069 FAM208AQ9UK61 1670 aaKnown RBP26.36■■□□□ 1.81
SPNS3-206ENST00000576069 IL2RBP14784 551 aa26.36■■□□□ 1.81
SPNS3-206ENST00000576069 NBPF6Q5VWK0 638 aa26.36■■□□□ 1.81
SPNS3-206ENST00000576069 CCDC125Q86Z20 511 aa26.36■■□□□ 1.81
SPNS3-206ENST00000576069 NBPF4Q96M43 638 aa26.36■■□□□ 1.81
SPNS3-206ENST00000576069 EP400Q96L91 3159 aa26.36■■□□□ 1.81
SPNS3-206ENST00000576069 PARP4Q9UKK3 1724 aaKnown RBP26.34■■□□□ 1.81
SPNS3-206ENST00000576069 EXOC5O00471 708 aa26.34■■□□□ 1.81
SPNS3-206ENST00000576069 FAM196AQ6ZSG2 479 aa26.32■■□□□ 1.8
SPNS3-206ENST00000576069 FAM182BQ5T319 152 aa26.31■■□□□ 1.8
SPNS3-206ENST00000576069 EIF4A2Q14240 407 aaKnown RBP26.29■■□□□ 1.8
SPNS3-206ENST00000576069 WNK3Q9BYP7 1800 aa26.28■■□□□ 1.8
SPNS3-206ENST00000576069 MTHFSP49914 203 aa26.28■■□□□ 1.8
SPNS3-206ENST00000576069 CNGB1Q14028 1251 aaPredicted RBP26.28■■□□□ 1.8
SPNS3-206ENST00000576069 DDX10Q13206 875 aaKnown RBP26.27■■□□□ 1.8
SPNS3-206ENST00000576069 LRRC37A3O60309 1634 aa26.27■■□□□ 1.8
SPNS3-206ENST00000576069 USHBP1Q8N6Y0 703 aa26.26■■□□□ 1.79
SPNS3-206ENST00000576069 MARCH10Q8NA82 808 aaPredicted RBP26.26■■□□□ 1.79
SPNS3-206ENST00000576069 EYA1Q99502 592 aa26.26■■□□□ 1.79
SPNS3-206ENST00000576069 TNS2Q63HR2 1409 aa26.25■■□□□ 1.79
SPNS3-206ENST00000576069 RAPGEF4Q8WZA2 1011 aa26.25■■□□□ 1.79
SPNS3-206ENST00000576069 OVOS2A0A0G2JMS6 1433 aa26.23■■□□□ 1.79
SPNS3-206ENST00000576069 NCAPD2Q15021 1401 aa26.23■■□□□ 1.79
SPNS3-206ENST00000576069 RGPD2P0DJD1 1756 aa26.23■■□□□ 1.79
SPNS3-206ENST00000576069 SF3B2Q13435 895 aaKnown RBP26.23■■□□□ 1.79
SPNS3-206ENST00000576069 TATP17735 454 aaPredicted RBP26.22■■□□□ 1.79
SPNS3-206ENST00000576069 BCL9O00512 1426 aa26.22■■□□□ 1.79
SPNS3-206ENST00000576069 ZCRB1Q8TBF4 217 aaKnown RBP26.21■■□□□ 1.79
SPNS3-206ENST00000576069 IL13P35225 146 aa26.2■■□□□ 1.78
SPNS3-206ENST00000576069 MEGF6O75095 1541 aa26.19■■□□□ 1.78
SPNS3-206ENST00000576069 IGSF1Q8N6C5 1336 aa26.19■■□□□ 1.78
SPNS3-206ENST00000576069 ZNF316A6NFI3 1004 aaPredicted RBP26.19■■□□□ 1.78
SPNS3-206ENST00000576069 TRIM37O94972 964 aa26.18■■□□□ 1.78
SPNS3-206ENST00000576069 PPP2R1AP30153 589 aa26.16■■□□□ 1.78
SPNS3-206ENST00000576069 DDX54Q8TDD1 881 aaKnown RBP26.16■■□□□ 1.78
SPNS3-206ENST00000576069 DIAPH1O60610 1272 aaKnown RBP26.15■■□□□ 1.78
SPNS3-206ENST00000576069 PARD3Q8TEW0 1356 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms