RNA–Protein interactions for RNA: ENST00000570773.5

ATP2A3-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 989 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-207ENST00000570773 PHRF1Q9P1Y6 1649 aaKnown RBP19.88■□□□□ 0.77
ATP2A3-207ENST00000570773 YTHDC1Q96MU7 727 aaKnown RBP19.88■□□□□ 0.77
ATP2A3-207ENST00000570773 ZBTB7CA1YPR0 619 aa19.87■□□□□ 0.77
ATP2A3-207ENST00000570773 U2SURPO15042 1029 aaKnown RBP19.87■□□□□ 0.77
ATP2A3-207ENST00000570773 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
ATP2A3-207ENST00000570773 KIAA0232Q92628 1395 aa19.86■□□□□ 0.77
ATP2A3-207ENST00000570773 U2AF1L5P0DN76 240 aaPredicted RBP19.86■□□□□ 0.77
ATP2A3-207ENST00000570773 HAP1P54257 671 aaPredicted RBP19.86■□□□□ 0.77
ATP2A3-207ENST00000570773 U2AF1Q01081 240 aaKnown RBP eCLIP19.86■□□□□ 0.77
ATP2A3-207ENST00000570773 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
ATP2A3-207ENST00000570773 COL22A1Q8NFW1 1626 aaPredicted RBP19.84■□□□□ 0.77
ATP2A3-207ENST00000570773 AXIN2Q9Y2T1 843 aa19.83■□□□□ 0.77
ATP2A3-207ENST00000570773 HSPA1LP34931 641 aa19.82■□□□□ 0.76
ATP2A3-207ENST00000570773 CHRNA2Q15822 529 aa19.82■□□□□ 0.76
ATP2A3-207ENST00000570773 PRDM11Q9NQV5 511 aa19.82■□□□□ 0.76
ATP2A3-207ENST00000570773 JCADQ9P266 1359 aa19.82■□□□□ 0.76
ATP2A3-207ENST00000570773 ABCC6O95255 1503 aa19.81■□□□□ 0.76
ATP2A3-207ENST00000570773 LTN1O94822 1766 aa19.8■□□□□ 0.76
ATP2A3-207ENST00000570773 ABCA3Q99758 1704 aa19.8■□□□□ 0.76
ATP2A3-207ENST00000570773 FCHSD2O94868 740 aa19.8■□□□□ 0.76
ATP2A3-207ENST00000570773 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
ATP2A3-207ENST00000570773 LTV1Q96GA3 475 aaPredicted RBP19.8■□□□□ 0.76
ATP2A3-207ENST00000570773 CCDC146Q8IYE0 955 aa19.79■□□□□ 0.76
ATP2A3-207ENST00000570773 ANKRD24Q8TF21 1146 aa19.79■□□□□ 0.76
ATP2A3-207ENST00000570773 EYA1Q99502 592 aa19.79■□□□□ 0.76
ATP2A3-207ENST00000570773 IGSF1Q8N6C5 1336 aa19.78■□□□□ 0.76
ATP2A3-207ENST00000570773 FAM83GA6ND36 823 aa19.78■□□□□ 0.76
ATP2A3-207ENST00000570773 RUNDC1Q96C34 613 aa19.78■□□□□ 0.76
ATP2A3-207ENST00000570773 PLEKHF1Q96S99 279 aa19.78■□□□□ 0.76
ATP2A3-207ENST00000570773 RSPH6AQ9H0K4 717 aa19.78■□□□□ 0.76
ATP2A3-207ENST00000570773 HMOX1P09601 288 aa19.77■□□□□ 0.76
ATP2A3-207ENST00000570773 SULT6B1Q6IMI4 303 aa19.77■□□□□ 0.76
ATP2A3-207ENST00000570773 PNNQ9H307 717 aaKnown RBP19.77■□□□□ 0.76
ATP2A3-207ENST00000570773 COL18A1P39060 1754 aa19.77■□□□□ 0.76
ATP2A3-207ENST00000570773 ERBB3P21860 1342 aa19.76■□□□□ 0.75
ATP2A3-207ENST00000570773 PRKAR2BP31323 418 aa19.75■□□□□ 0.75
ATP2A3-207ENST00000570773 AEBP1Q8IUX7 1158 aa19.75■□□□□ 0.75
ATP2A3-207ENST00000570773 RGPD1P0DJD0 1748 aa19.74■□□□□ 0.75
ATP2A3-207ENST00000570773 KDRP35968 1356 aa19.74■□□□□ 0.75
ATP2A3-207ENST00000570773 NUTM2BA6NNL0 878 aaPredicted RBP19.74■□□□□ 0.75
ATP2A3-207ENST00000570773 NUTM2EB1AL46 878 aaPredicted RBP19.74■□□□□ 0.75
ATP2A3-207ENST00000570773 NBPF6Q5VWK0 638 aa19.74■□□□□ 0.75
ATP2A3-207ENST00000570773 NUTM2AQ8IVF1 878 aaPredicted RBP19.74■□□□□ 0.75
ATP2A3-207ENST00000570773 NBPF4Q96M43 638 aa19.74■□□□□ 0.75
ATP2A3-207ENST00000570773 SPATA31A6Q5VVP1 1343 aa19.74■□□□□ 0.75
ATP2A3-207ENST00000570773 LMO7Q8WWI1 1683 aa19.73■□□□□ 0.75
ATP2A3-207ENST00000570773 CAMTA1Q9Y6Y1 1673 aa19.73■□□□□ 0.75
ATP2A3-207ENST00000570773 APAF1O14727 1248 aa19.73■□□□□ 0.75
ATP2A3-207ENST00000570773 ADAMTS2O95450 1211 aa19.72■□□□□ 0.75
ATP2A3-207ENST00000570773 NCAPD2Q15021 1401 aa19.71■□□□□ 0.75
ATP2A3-207ENST00000570773 SENP3-EIF4A1A0A087X0R7 540 aa19.71■□□□□ 0.75
ATP2A3-207ENST00000570773 CSB-PGBD3P0DP91 1061 aa19.71■□□□□ 0.75
ATP2A3-207ENST00000570773 TCP11L2Q8N4U5 519 aa19.71■□□□□ 0.75
ATP2A3-207ENST00000570773 ZBED9Q6R2W3 1325 aa19.71■□□□□ 0.75
ATP2A3-207ENST00000570773 MAPK8IP3Q9UPT6 1336 aa19.71■□□□□ 0.75
ATP2A3-207ENST00000570773 USHBP1Q8N6Y0 703 aa19.7■□□□□ 0.74
ATP2A3-207ENST00000570773 PHACTR3Q96KR7 559 aa19.7■□□□□ 0.74
ATP2A3-207ENST00000570773 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
ATP2A3-207ENST00000570773 WDR17Q8IZU2 1322 aa19.7■□□□□ 0.74
ATP2A3-207ENST00000570773 NGEFQ8N5V2 710 aa19.69■□□□□ 0.74
ATP2A3-207ENST00000570773 NLRP2Q9NX02 1062 aa19.69■□□□□ 0.74
ATP2A3-207ENST00000570773 BTG4Q9NY30 223 aa19.69■□□□□ 0.74
ATP2A3-207ENST00000570773 NEFMP07197 916 aa19.68■□□□□ 0.74
ATP2A3-207ENST00000570773 NCBP3Q53F19 620 aaKnown RBP19.68■□□□□ 0.74
ATP2A3-207ENST00000570773 COL14A1Q05707 1796 aaKnown RBP19.67■□□□□ 0.74
ATP2A3-207ENST00000570773 EVA1CP58658 441 aa19.67■□□□□ 0.74
ATP2A3-207ENST00000570773 SALL2Q9Y467 1007 aaPredicted RBP19.67■□□□□ 0.74
ATP2A3-207ENST00000570773 TMPOP42166 694 aaKnown RBP19.66■□□□□ 0.74
ATP2A3-207ENST00000570773 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
ATP2A3-207ENST00000570773 RRP7AQ9Y3A4 280 aaKnown RBP19.66■□□□□ 0.74
ATP2A3-207ENST00000570773 NFE2L2Q16236 605 aa19.65■□□□□ 0.74
ATP2A3-207ENST00000570773 LARP1Q6PKG0 1096 aaKnown RBP19.65■□□□□ 0.74
ATP2A3-207ENST00000570773 CARD10Q9BWT7 1032 aa19.65■□□□□ 0.74
ATP2A3-207ENST00000570773 LRP6O75581 1613 aa19.65■□□□□ 0.74
ATP2A3-207ENST00000570773 CCDC27Q2M243 656 aa19.64■□□□□ 0.73
ATP2A3-207ENST00000570773 TOM1L2Q6ZVM7 507 aa19.64■□□□□ 0.73
ATP2A3-207ENST00000570773 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
ATP2A3-207ENST00000570773 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
ATP2A3-207ENST00000570773 ZNF521Q96K83 1311 aa19.63■□□□□ 0.73
ATP2A3-207ENST00000570773 SLIT2O94813 1529 aa19.62■□□□□ 0.73
ATP2A3-207ENST00000570773 NEUROD2Q15784 382 aa19.62■□□□□ 0.73
ATP2A3-207ENST00000570773 CRB1P82279 1406 aa19.61■□□□□ 0.73
ATP2A3-207ENST00000570773 RIPK4P57078 832 aa19.61■□□□□ 0.73
ATP2A3-207ENST00000570773 MTHFSDQ2M296 383 aaKnown RBP19.61■□□□□ 0.73
ATP2A3-207ENST00000570773 C8orf37Q96NL8 207 aa19.61■□□□□ 0.73
ATP2A3-207ENST00000570773 FAM208AQ9UK61 1670 aaKnown RBP19.61■□□□□ 0.73
ATP2A3-207ENST00000570773 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
ATP2A3-207ENST00000570773 FNBP4Q8N3X1 1017 aaPredicted RBP19.6■□□□□ 0.73
ATP2A3-207ENST00000570773 NGLY1Q96IV0 654 aa19.6■□□□□ 0.73
ATP2A3-207ENST00000570773 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
ATP2A3-207ENST00000570773 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
ATP2A3-207ENST00000570773 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
ATP2A3-207ENST00000570773 PLEKHG2Q9H7P9 1386 aa19.58■□□□□ 0.73
ATP2A3-207ENST00000570773 RGPD2P0DJD1 1756 aa19.58■□□□□ 0.73
ATP2A3-207ENST00000570773 CENPBP07199 599 aaPredicted RBP19.58■□□□□ 0.72
ATP2A3-207ENST00000570773 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.72
ATP2A3-207ENST00000570773 PDE3BQ13370 1112 aa19.58■□□□□ 0.72
ATP2A3-207ENST00000570773 AMOTQ4VCS5 1084 aa19.58■□□□□ 0.72
ATP2A3-207ENST00000570773 PLEKHO1Q53GL0 409 aaPredicted RBP19.58■□□□□ 0.72
ATP2A3-207ENST00000570773 PLCH1Q4KWH8 1693 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms