RNA–Protein interactions for RNA: ENST00000569316.1

CMTM2-204, Transcript of CKLF like MARVEL transmembrane domain containing 2, humanhuman

TSL 5

Gene CMTM2, Length 454 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM2-204ENST00000569316 MAP2P11137 1827 aaKnown RBP13.61□□□□□ -0.23
CMTM2-204ENST00000569316 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
CMTM2-204ENST00000569316 SPATA31A1Q5TZJ5 1347 aa13.61□□□□□ -0.23
CMTM2-204ENST00000569316 SOX12O15370 315 aa13.6□□□□□ -0.23
CMTM2-204ENST00000569316 COG3Q96JB2 828 aa13.6□□□□□ -0.23
CMTM2-204ENST00000569316 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
CMTM2-204ENST00000569316 STRN4Q9NRL3 753 aa13.59□□□□□ -0.23
CMTM2-204ENST00000569316 CCDC9Q9Y3X0 531 aaKnown RBP13.59□□□□□ -0.23
CMTM2-204ENST00000569316 CCDC7Q96M83 1385 aa13.58□□□□□ -0.23
CMTM2-204ENST00000569316 CRB1P82279 1406 aa13.58□□□□□ -0.24
CMTM2-204ENST00000569316 EVA1CP58658 441 aa13.58□□□□□ -0.24
CMTM2-204ENST00000569316 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
CMTM2-204ENST00000569316 PANK3Q9H999 370 aa13.58□□□□□ -0.24
CMTM2-204ENST00000569316 FAM208AQ9UK61 1670 aaKnown RBP13.58□□□□□ -0.24
CMTM2-204ENST00000569316 PARP4Q9UKK3 1724 aaKnown RBP13.57□□□□□ -0.24
CMTM2-204ENST00000569316 ZBTB7CA1YPR0 619 aa13.57□□□□□ -0.24
CMTM2-204ENST00000569316 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
CMTM2-204ENST00000569316 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
CMTM2-204ENST00000569316 WDR17Q8IZU2 1322 aa13.57□□□□□ -0.24
CMTM2-204ENST00000569316 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
CMTM2-204ENST00000569316 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
CMTM2-204ENST00000569316 RGPD2P0DJD1 1756 aa13.56□□□□□ -0.24
CMTM2-204ENST00000569316 FBLN1P23142 703 aa13.56□□□□□ -0.24
CMTM2-204ENST00000569316 FAM98CQ17RN3 349 aaKnown RBP13.56□□□□□ -0.24
CMTM2-204ENST00000569316 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
CMTM2-204ENST00000569316 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
CMTM2-204ENST00000569316 WASHC2AQ641Q2 1341 aa13.56□□□□□ -0.24
CMTM2-204ENST00000569316 EP400Q96L91 3159 aa13.55□□□□□ -0.24
CMTM2-204ENST00000569316 IP6K1Q92551 441 aa13.55□□□□□ -0.24
CMTM2-204ENST00000569316 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
CMTM2-204ENST00000569316 ERBB3P21860 1342 aa13.55□□□□□ -0.24
CMTM2-204ENST00000569316 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
CMTM2-204ENST00000569316 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
CMTM2-204ENST00000569316 NSD2O96028 1365 aa13.54□□□□□ -0.24
CMTM2-204ENST00000569316 UPF1Q92900 1129 aaKnown RBP eCLIP13.53□□□□□ -0.24
CMTM2-204ENST00000569316 CARD10Q9BWT7 1032 aa13.53□□□□□ -0.24
CMTM2-204ENST00000569316 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
CMTM2-204ENST00000569316 PER1O15534 1290 aaPredicted RBP13.52□□□□□ -0.25
CMTM2-204ENST00000569316 HOXC9P31274 260 aa13.52□□□□□ -0.25
CMTM2-204ENST00000569316 RRS1Q15050 365 aaKnown RBP13.52□□□□□ -0.25
CMTM2-204ENST00000569316 TOM1L2Q6ZVM7 507 aa13.52□□□□□ -0.25
CMTM2-204ENST00000569316 USP35Q9P2H5 1018 aa13.52□□□□□ -0.25
CMTM2-204ENST00000569316 DISP2A7MBM2 1401 aa13.52□□□□□ -0.25
CMTM2-204ENST00000569316 LRRC37A3O60309 1634 aa13.52□□□□□ -0.25
CMTM2-204ENST00000569316 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
CMTM2-204ENST00000569316 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
CMTM2-204ENST00000569316 AMPHP49418 695 aa13.5□□□□□ -0.25
CMTM2-204ENST00000569316 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
CMTM2-204ENST00000569316 KNSTRNQ9Y448 316 aa13.5□□□□□ -0.25
CMTM2-204ENST00000569316 FLT4P35916 1363 aa13.49□□□□□ -0.25
CMTM2-204ENST00000569316 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
CMTM2-204ENST00000569316 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
CMTM2-204ENST00000569316 INSRP06213 1382 aa13.48□□□□□ -0.25
CMTM2-204ENST00000569316 NPC1L1Q9UHC9 1359 aa13.48□□□□□ -0.25
CMTM2-204ENST00000569316 A0A0G2JS52 829 aa13.48□□□□□ -0.25
CMTM2-204ENST00000569316 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
CMTM2-204ENST00000569316 MYT1Q01538 1121 aa13.48□□□□□ -0.25
CMTM2-204ENST00000569316 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
CMTM2-204ENST00000569316 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
CMTM2-204ENST00000569316 POLKQ9UBT6 870 aa13.47□□□□□ -0.25
CMTM2-204ENST00000569316 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
CMTM2-204ENST00000569316 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
CMTM2-204ENST00000569316 CDCA7Q9BWT1 371 aaPredicted RBP13.46□□□□□ -0.25
CMTM2-204ENST00000569316 NLRP2Q9NX02 1062 aa13.46□□□□□ -0.25
CMTM2-204ENST00000569316 TNS1Q9HBL0 1735 aaKnown RBP13.46□□□□□ -0.25
CMTM2-204ENST00000569316 SHANK3Q9BYB0 1731 aa13.45□□□□□ -0.26
CMTM2-204ENST00000569316 NCAPD2Q15021 1401 aa13.45□□□□□ -0.26
CMTM2-204ENST00000569316 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
CMTM2-204ENST00000569316 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
CMTM2-204ENST00000569316 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
CMTM2-204ENST00000569316 KAT6BQ8WYB5 2073 aa13.43□□□□□ -0.26
CMTM2-204ENST00000569316 PDE3BQ13370 1112 aa13.43□□□□□ -0.26
CMTM2-204ENST00000569316 FAM182BQ5T319 152 aa13.43□□□□□ -0.26
CMTM2-204ENST00000569316 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
CMTM2-204ENST00000569316 BCL9O00512 1426 aa13.42□□□□□ -0.26
CMTM2-204ENST00000569316 IL2RBP14784 551 aa13.42□□□□□ -0.26
CMTM2-204ENST00000569316 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
CMTM2-204ENST00000569316 DDB1Q16531 1140 aa13.42□□□□□ -0.26
CMTM2-204ENST00000569316 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
CMTM2-204ENST00000569316 FAM196AQ6ZSG2 479 aa13.42□□□□□ -0.26
CMTM2-204ENST00000569316 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
CMTM2-204ENST00000569316 OVOS2A0A0G2JMS6 1433 aa13.41□□□□□ -0.26
CMTM2-204ENST00000569316 MEGF6O75095 1541 aa13.4□□□□□ -0.26
CMTM2-204ENST00000569316 PKD1L3Q7Z443 1732 aa13.4□□□□□ -0.26
CMTM2-204ENST00000569316 EXOC5O00471 708 aa13.4□□□□□ -0.26
CMTM2-204ENST00000569316 PPM1GO15355 546 aaPredicted RBP13.4□□□□□ -0.26
CMTM2-204ENST00000569316 MARCH10Q8NA82 808 aaPredicted RBP13.4□□□□□ -0.26
CMTM2-204ENST00000569316 CC2D1BQ5T0F9 858 aaKnown RBP13.39□□□□□ -0.27
CMTM2-204ENST00000569316 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
CMTM2-204ENST00000569316 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
CMTM2-204ENST00000569316 EYA1Q99502 592 aa13.37□□□□□ -0.27
CMTM2-204ENST00000569316 RGPD3A6NKT7 1758 aaPredicted RBP13.37□□□□□ -0.27
CMTM2-204ENST00000569316 RGPD4Q7Z3J3 1758 aa13.37□□□□□ -0.27
CMTM2-204ENST00000569316 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
CMTM2-204ENST00000569316 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
CMTM2-204ENST00000569316 TRIM37O94972 964 aa13.35□□□□□ -0.27
CMTM2-204ENST00000569316 MTHFSP49914 203 aa13.35□□□□□ -0.27
CMTM2-204ENST00000569316 COL3A1P02461 1466 aaPredicted RBP13.35□□□□□ -0.27
CMTM2-204ENST00000569316 RREB1Q92766 1687 aa13.34□□□□□ -0.27
CMTM2-204ENST00000569316 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms