RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	ROCK2	O75116	1388 aa	Known RBP	11.89	□□□□□ -0.51
TSC2-223	ENST00000568566	C11orf95	C9JLR9	678 aa	Predicted RBP	11.88	□□□□□ -0.51
TSC2-223	ENST00000568566	ZBTB7A	O95365	584 aa		11.88	□□□□□ -0.51
TSC2-223	ENST00000568566	DDB1	Q16531	1140 aa		11.88	□□□□□ -0.51
TSC2-223	ENST00000568566	CARD11	Q9BXL7	1154 aa		11.88	□□□□□ -0.51
TSC2-223	ENST00000568566	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.88	□□□□□ -0.51
TSC2-223	ENST00000568566	CABP2	Q9NPB3	220 aa		11.88	□□□□□ -0.51
TSC2-223	ENST00000568566	KIAA1210	Q9ULL0	1709 aa		11.88	□□□□□ -0.51
TSC2-223	ENST00000568566	SLIT3	O75094	1523 aa		11.87	□□□□□ -0.51
TSC2-223	ENST00000568566	TOM1L2	Q6ZVM7	507 aa		11.87	□□□□□ -0.51
TSC2-223	ENST00000568566	AATK	Q6ZMQ8	1374 aa		11.87	□□□□□ -0.51
TSC2-223	ENST00000568566	AKAP12	Q02952	1782 aa		11.87	□□□□□ -0.51
TSC2-223	ENST00000568566	USP6	P35125	1406 aa		11.86	□□□□□ -0.51
TSC2-223	ENST00000568566	PLSCR1	O15162	318 aa		11.86	□□□□□ -0.51
TSC2-223	ENST00000568566	NLRP6	P59044	892 aa		11.86	□□□□□ -0.51
TSC2-223	ENST00000568566	TIMELESS	Q9UNS1	1208 aa		11.86	□□□□□ -0.51
TSC2-223	ENST00000568566	PIK3C2A	O00443	1686 aa		11.86	□□□□□ -0.51
TSC2-223	ENST00000568566	QRICH2	Q9H0J4	1663 aa		11.86	□□□□□ -0.51
TSC2-223	ENST00000568566	COL18A1	P39060	1754 aa		11.85	□□□□□ -0.51
TSC2-223	ENST00000568566	MARCH10	Q8NA82	808 aa	Predicted RBP	11.85	□□□□□ -0.51
TSC2-223	ENST00000568566	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.85	□□□□□ -0.51
TSC2-223	ENST00000568566	PTGER2	P43116	358 aa		11.84	□□□□□ -0.51
TSC2-223	ENST00000568566	PROM2	Q8N271	834 aa		11.84	□□□□□ -0.51
TSC2-223	ENST00000568566	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.84	□□□□□ -0.51
TSC2-223	ENST00000568566	CPSF1	Q10570	1443 aa	Known RBP	11.84	□□□□□ -0.51
TSC2-223	ENST00000568566	WDR17	Q8IZU2	1322 aa		11.84	□□□□□ -0.51
TSC2-223	ENST00000568566	BRD4	O60885	1362 aa	Predicted RBP	11.83	□□□□□ -0.52
TSC2-223	ENST00000568566	ST20-MTHFS	A0A0A6YYL1	179 aa		11.83	□□□□□ -0.52
TSC2-223	ENST00000568566	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.83	□□□□□ -0.52
TSC2-223	ENST00000568566	CABP1	Q9NZU7	370 aa		11.83	□□□□□ -0.52
TSC2-223	ENST00000568566	AXIN2	Q9Y2T1	843 aa		11.83	□□□□□ -0.52
TSC2-223	ENST00000568566	RGPD5	Q99666	1765 aa		11.82	□□□□□ -0.52
TSC2-223	ENST00000568566	SOX12	O15370	315 aa		11.82	□□□□□ -0.52
TSC2-223	ENST00000568566	CSB-PGBD3	P0DP91	1061 aa		11.82	□□□□□ -0.52
TSC2-223	ENST00000568566	STK32B	Q9NY57	414 aa		11.82	□□□□□ -0.52
TSC2-223	ENST00000568566	BCL9	O00512	1426 aa		11.82	□□□□□ -0.52
TSC2-223	ENST00000568566	TXNRD1	Q16881	649 aa		11.81	□□□□□ -0.52
TSC2-223	ENST00000568566	TESK2	Q96S53	571 aa		11.81	□□□□□ -0.52
TSC2-223	ENST00000568566	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.81	□□□□□ -0.52
TSC2-223	ENST00000568566	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.81	□□□□□ -0.52
TSC2-223	ENST00000568566	HSPA5	P11021	654 aa	Known RBP	11.8	□□□□□ -0.52
TSC2-223	ENST00000568566	TNS2	Q63HR2	1409 aa		11.79	□□□□□ -0.52
TSC2-223	ENST00000568566	NHS	Q6T4R5	1651 aa		11.79	□□□□□ -0.52
TSC2-223	ENST00000568566	SLC15A2	Q16348	729 aa		11.79	□□□□□ -0.52
TSC2-223	ENST00000568566	SYT17	Q9BSW7	474 aa		11.79	□□□□□ -0.52
TSC2-223	ENST00000568566	CARD10	Q9BWT7	1032 aa		11.79	□□□□□ -0.52
TSC2-223	ENST00000568566	NFAT5	O94916	1531 aa		11.79	□□□□□ -0.52
TSC2-223	ENST00000568566	USP47	Q96K76	1375 aa		11.79	□□□□□ -0.52
TSC2-223	ENST00000568566	CHD4	Q14839	1912 aa		11.78	□□□□□ -0.52
TSC2-223	ENST00000568566	ARHGEF25	Q86VW2	580 aa		11.78	□□□□□ -0.52
TSC2-223	ENST00000568566	MTFR1L	Q9H019	292 aa		11.78	□□□□□ -0.52
TSC2-223	ENST00000568566	SENP3-EIF4A1	A0A087X0R7	540 aa		11.77	□□□□□ -0.53
TSC2-223	ENST00000568566	EXOC5	O00471	708 aa		11.77	□□□□□ -0.53
TSC2-223	ENST00000568566	SGIP1	Q9BQI5	828 aa		11.77	□□□□□ -0.53
TSC2-223	ENST00000568566	PAPPA	Q13219	1627 aa		11.77	□□□□□ -0.53
TSC2-223	ENST00000568566	TTC21B	Q7Z4L5	1316 aa		11.77	□□□□□ -0.53
TSC2-223	ENST00000568566	ABCC6	O95255	1503 aa		11.76	□□□□□ -0.53
TSC2-223	ENST00000568566	KCNH5	Q8NCM2	988 aa		11.76	□□□□□ -0.53
TSC2-223	ENST00000568566	ACSBG1	Q96GR2	724 aa		11.76	□□□□□ -0.53
TSC2-223	ENST00000568566	EVC2	Q86UK5	1308 aa		11.76	□□□□□ -0.53
TSC2-223	ENST00000568566	CCDC7	Q96M83	1385 aa		11.76	□□□□□ -0.53
TSC2-223	ENST00000568566	GOLGB1	Q14789	3259 aa	Known RBP	11.75	□□□□□ -0.53
TSC2-223	ENST00000568566	BTAF1	O14981	1849 aa		11.75	□□□□□ -0.53
TSC2-223	ENST00000568566	ZNF827	Q17R98	1081 aa		11.74	□□□□□ -0.53
TSC2-223	ENST00000568566	ARX	Q96QS3	562 aa		11.74	□□□□□ -0.53
TSC2-223	ENST00000568566	KAT6B	Q8WYB5	2073 aa		11.74	□□□□□ -0.53
TSC2-223	ENST00000568566	C1QTNF8	P60827	252 aa		11.73	□□□□□ -0.53
TSC2-223	ENST00000568566	TTC21A	Q8NDW8	1320 aa		11.73	□□□□□ -0.53
TSC2-223	ENST00000568566	NLRP2	Q9NX02	1062 aa		11.73	□□□□□ -0.53
TSC2-223	ENST00000568566	MON2	Q7Z3U7	1717 aa		11.72	□□□□□ -0.53
TSC2-223	ENST00000568566	KTN1	Q86UP2	1357 aa	Known RBP	11.72	□□□□□ -0.53
TSC2-223	ENST00000568566	MAP3K5	Q99683	1374 aa		11.72	□□□□□ -0.53
TSC2-223	ENST00000568566	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
TSC2-223	ENST00000568566	KLHL34	Q8N239	644 aa		11.72	□□□□□ -0.53
TSC2-223	ENST00000568566	SLC12A5	Q9H2X9	1139 aa		11.72	□□□□□ -0.53
TSC2-223	ENST00000568566	LTN1	O94822	1766 aa		11.72	□□□□□ -0.53
TSC2-223	ENST00000568566	ERBB3	P21860	1342 aa		11.71	□□□□□ -0.53
TSC2-223	ENST00000568566	GPR162	Q16538	588 aa		11.71	□□□□□ -0.53
TSC2-223	ENST00000568566	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
TSC2-223	ENST00000568566	ZNF692	Q9BU19	519 aa	Predicted RBP	11.71	□□□□□ -0.53
TSC2-223	ENST00000568566	CEP350	Q5VT06	3117 aa		11.71	□□□□□ -0.54
TSC2-223	ENST00000568566	IL2RB	P14784	551 aa		11.7	□□□□□ -0.54
TSC2-223	ENST00000568566	PELP1	Q8IZL8	1130 aa	Known RBP	11.7	□□□□□ -0.54
TSC2-223	ENST00000568566	LRRC4B	Q9NT99	713 aa		11.7	□□□□□ -0.54
TSC2-223	ENST00000568566	USP54	Q70EL1	1684 aa		11.69	□□□□□ -0.54
TSC2-223	ENST00000568566	NME9	Q86XW9	330 aa		11.69	□□□□□ -0.54
TSC2-223	ENST00000568566	POLR3GL	Q9BT43	218 aa		11.69	□□□□□ -0.54
TSC2-223	ENST00000568566	TUBGCP6	Q96RT7	1819 aa		11.69	□□□□□ -0.54
TSC2-223	ENST00000568566	SBNO2	Q9Y2G9	1366 aa		11.68	□□□□□ -0.54
TSC2-223	ENST00000568566	GIGYF1	O75420	1035 aa	Predicted RBP	11.68	□□□□□ -0.54
TSC2-223	ENST00000568566	TMC1	Q8TDI8	760 aa		11.68	□□□□□ -0.54
TSC2-223	ENST00000568566	ANKRD24	Q8TF21	1146 aa		11.68	□□□□□ -0.54
TSC2-223	ENST00000568566	QSER1	Q2KHR3	1735 aa		11.67	□□□□□ -0.54
TSC2-223	ENST00000568566	AKT1S1	Q96B36	256 aa		11.67	□□□□□ -0.54
TSC2-223	ENST00000568566	USP31	Q70CQ4	1352 aa		11.67	□□□□□ -0.54
TSC2-223	ENST00000568566	SHANK3	Q9BYB0	1731 aa		11.66	□□□□□ -0.54
TSC2-223	ENST00000568566	PNPLA7	Q6ZV29	1317 aa		11.66	□□□□□ -0.54
TSC2-223	ENST00000568566	CD163L1	Q9NR16	1453 aa		11.66	□□□□□ -0.54
TSC2-223	ENST00000568566	POLD1	P28340	1107 aa		11.66	□□□□□ -0.54
TSC2-223	ENST00000568566	KCNQ4	P56696	695 aa		11.66	□□□□□ -0.54

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