RNA–Protein interactions for RNA: ENST00000567393.5

NEIL1-213, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 1,221 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-213ENST00000567393 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
NEIL1-213ENST00000567393 LARP1Q6PKG0 1096 aaKnown RBP18.35■□□□□ 0.53
NEIL1-213ENST00000567393 FAM98CQ17RN3 349 aaKnown RBP18.34■□□□□ 0.53
NEIL1-213ENST00000567393 SEPT12Q8IYM1 358 aa18.34■□□□□ 0.53
NEIL1-213ENST00000567393 PANK3Q9H999 370 aa18.34■□□□□ 0.53
NEIL1-213ENST00000567393 AXIN2Q9Y2T1 843 aa18.34■□□□□ 0.53
NEIL1-213ENST00000567393 CRB1P82279 1406 aa18.33■□□□□ 0.53
NEIL1-213ENST00000567393 WDR17Q8IZU2 1322 aa18.33■□□□□ 0.53
NEIL1-213ENST00000567393 A0A0G2JS52 829 aa18.33■□□□□ 0.52
NEIL1-213ENST00000567393 MYT1Q01538 1121 aa18.33■□□□□ 0.52
NEIL1-213ENST00000567393 TCP11L2Q8N4U5 519 aa18.32■□□□□ 0.52
NEIL1-213ENST00000567393 THRAP3Q9Y2W1 955 aaKnown RBP18.32■□□□□ 0.52
NEIL1-213ENST00000567393 COL18A1P39060 1754 aa18.32■□□□□ 0.52
NEIL1-213ENST00000567393 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
NEIL1-213ENST00000567393 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
NEIL1-213ENST00000567393 BARGINQ6ZT62 677 aa18.31■□□□□ 0.52
NEIL1-213ENST00000567393 TOM1L2Q6ZVM7 507 aa18.31■□□□□ 0.52
NEIL1-213ENST00000567393 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
NEIL1-213ENST00000567393 BLMP54132 1417 aaPredicted RBP18.31■□□□□ 0.52
NEIL1-213ENST00000567393 MAP3K19Q56UN5 1328 aa18.3■□□□□ 0.52
NEIL1-213ENST00000567393 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
NEIL1-213ENST00000567393 NSD2O96028 1365 aa18.3■□□□□ 0.52
NEIL1-213ENST00000567393 ERBB3P21860 1342 aa18.29■□□□□ 0.52
NEIL1-213ENST00000567393 KIF20BQ96Q89 1820 aa18.29■□□□□ 0.52
NEIL1-213ENST00000567393 IP6K1Q92551 441 aa18.29■□□□□ 0.52
NEIL1-213ENST00000567393 THSD7AQ9UPZ6 1657 aa18.28■□□□□ 0.52
NEIL1-213ENST00000567393 AMPHP49418 695 aa18.28■□□□□ 0.52
NEIL1-213ENST00000567393 WASHC2AQ641Q2 1341 aa18.27■□□□□ 0.52
NEIL1-213ENST00000567393 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
NEIL1-213ENST00000567393 CARD10Q9BWT7 1032 aa18.27■□□□□ 0.52
NEIL1-213ENST00000567393 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.52
NEIL1-213ENST00000567393 KIF24Q5T7B8 1368 aa18.27■□□□□ 0.51
NEIL1-213ENST00000567393 HOXC9P31274 260 aa18.26■□□□□ 0.51
NEIL1-213ENST00000567393 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
NEIL1-213ENST00000567393 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
NEIL1-213ENST00000567393 LTN1O94822 1766 aa18.25■□□□□ 0.51
NEIL1-213ENST00000567393 ZEB1P37275 1124 aaPredicted RBP18.25■□□□□ 0.51
NEIL1-213ENST00000567393 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
NEIL1-213ENST00000567393 FBLN1P23142 703 aa18.24■□□□□ 0.51
NEIL1-213ENST00000567393 CDCA7Q9BWT1 371 aaPredicted RBP18.24■□□□□ 0.51
NEIL1-213ENST00000567393 FLT4P35916 1363 aa18.23■□□□□ 0.51
NEIL1-213ENST00000567393 NLRP2Q9NX02 1062 aa18.23■□□□□ 0.51
NEIL1-213ENST00000567393 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
NEIL1-213ENST00000567393 INSRP06213 1382 aa18.2■□□□□ 0.5
NEIL1-213ENST00000567393 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
NEIL1-213ENST00000567393 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
NEIL1-213ENST00000567393 CCDC125Q86Z20 511 aa18.2■□□□□ 0.5
NEIL1-213ENST00000567393 LTV1Q96GA3 475 aaPredicted RBP18.2■□□□□ 0.5
NEIL1-213ENST00000567393 DISP2A7MBM2 1401 aa18.19■□□□□ 0.5
NEIL1-213ENST00000567393 PER1O15534 1290 aaPredicted RBP18.19■□□□□ 0.5
NEIL1-213ENST00000567393 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
NEIL1-213ENST00000567393 EMILIN1Q9Y6C2 1016 aa18.19■□□□□ 0.5
NEIL1-213ENST00000567393 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
NEIL1-213ENST00000567393 DDB1Q16531 1140 aa18.18■□□□□ 0.5
NEIL1-213ENST00000567393 RGPD5Q99666 1765 aa18.17■□□□□ 0.5
NEIL1-213ENST00000567393 BRWD3Q6RI45 1802 aa18.17■□□□□ 0.5
NEIL1-213ENST00000567393 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
NEIL1-213ENST00000567393 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
NEIL1-213ENST00000567393 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
NEIL1-213ENST00000567393 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
NEIL1-213ENST00000567393 FAM208AQ9UK61 1670 aaKnown RBP18.17■□□□□ 0.5
NEIL1-213ENST00000567393 PARP4Q9UKK3 1724 aaKnown RBP18.17■□□□□ 0.5
NEIL1-213ENST00000567393 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
NEIL1-213ENST00000567393 FAM196AQ6ZSG2 479 aa18.16■□□□□ 0.5
NEIL1-213ENST00000567393 PEAK1Q9H792 1746 aa18.15■□□□□ 0.5
NEIL1-213ENST00000567393 IL2RBP14784 551 aa18.15■□□□□ 0.5
NEIL1-213ENST00000567393 LRRC37A3O60309 1634 aa18.15■□□□□ 0.5
NEIL1-213ENST00000567393 TNS2Q63HR2 1409 aa18.14■□□□□ 0.49
NEIL1-213ENST00000567393 EXOC5O00471 708 aa18.13■□□□□ 0.49
NEIL1-213ENST00000567393 SF3B2Q13435 895 aaKnown RBP18.13■□□□□ 0.49
NEIL1-213ENST00000567393 FAM182BQ5T319 152 aa18.13■□□□□ 0.49
NEIL1-213ENST00000567393 OVOS2A0A0G2JMS6 1433 aa18.13■□□□□ 0.49
NEIL1-213ENST00000567393 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
NEIL1-213ENST00000567393 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
NEIL1-213ENST00000567393 NBPF6Q5VWK0 638 aa18.11■□□□□ 0.49
NEIL1-213ENST00000567393 NBPF4Q96M43 638 aa18.11■□□□□ 0.49
NEIL1-213ENST00000567393 BCL9O00512 1426 aa18.08■□□□□ 0.49
NEIL1-213ENST00000567393 MARCH10Q8NA82 808 aaPredicted RBP18.08■□□□□ 0.48
NEIL1-213ENST00000567393 EIF4A2Q14240 407 aaKnown RBP18.07■□□□□ 0.48
NEIL1-213ENST00000567393 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
NEIL1-213ENST00000567393 RAPGEF4Q8WZA2 1011 aa18.07■□□□□ 0.48
NEIL1-213ENST00000567393 NCAPD2Q15021 1401 aa18.06■□□□□ 0.48
NEIL1-213ENST00000567393 TRIM37O94972 964 aa18.06■□□□□ 0.48
NEIL1-213ENST00000567393 BAG6P46379 1132 aa18.06■□□□□ 0.48
NEIL1-213ENST00000567393 MEGF6O75095 1541 aa18.06■□□□□ 0.48
NEIL1-213ENST00000567393 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
NEIL1-213ENST00000567393 EYA1Q99502 592 aa18.04■□□□□ 0.48
NEIL1-213ENST00000567393 RGPD1P0DJD0 1748 aa18.03■□□□□ 0.48
NEIL1-213ENST00000567393 MTHFSP49914 203 aa18.03■□□□□ 0.48
NEIL1-213ENST00000567393 ZCRB1Q8TBF4 217 aaKnown RBP18.03■□□□□ 0.48
NEIL1-213ENST00000567393 MAP2P11137 1827 aaKnown RBP18.02■□□□□ 0.48
NEIL1-213ENST00000567393 EP400Q96L91 3159 aa18.02■□□□□ 0.48
NEIL1-213ENST00000567393 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.48
NEIL1-213ENST00000567393 DEFB132Q7Z7B7 95 aa18.02■□□□□ 0.48
NEIL1-213ENST00000567393 PLEKHG2Q9H7P9 1386 aa18.02■□□□□ 0.47
NEIL1-213ENST00000567393 IGSF1Q8N6C5 1336 aa18.01■□□□□ 0.47
NEIL1-213ENST00000567393 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
NEIL1-213ENST00000567393 BCL11BQ9C0K0 894 aaPredicted RBP18■□□□□ 0.47
NEIL1-213ENST00000567393 PARD3Q8TEW0 1356 aa18■□□□□ 0.47
NEIL1-213ENST00000567393 RGPD2P0DJD1 1756 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms