RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 SLIT3O75094 1523 aa17.4■□□□□ 0.38
KLHDC4-216ENST00000566561 CLSPNQ9HAW4 1339 aa17.4■□□□□ 0.38
KLHDC4-216ENST00000566561 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
KLHDC4-216ENST00000566561 TCP11L2Q8N4U5 519 aa17.39■□□□□ 0.37
KLHDC4-216ENST00000566561 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
KLHDC4-216ENST00000566561 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
KLHDC4-216ENST00000566561 PIK3C2AO00443 1686 aa17.39■□□□□ 0.37
KLHDC4-216ENST00000566561 NBPF14Q5TI25 921 aa17.38■□□□□ 0.37
KLHDC4-216ENST00000566561 BARGINQ6ZT62 677 aa17.38■□□□□ 0.37
KLHDC4-216ENST00000566561 NME9Q86XW9 330 aa17.37■□□□□ 0.37
KLHDC4-216ENST00000566561 SBF2Q86WG5 1849 aa17.37■□□□□ 0.37
KLHDC4-216ENST00000566561 USP47Q96K76 1375 aa17.37■□□□□ 0.37
KLHDC4-216ENST00000566561 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
KLHDC4-216ENST00000566561 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
KLHDC4-216ENST00000566561 THRAP3Q9Y2W1 955 aaKnown RBP17.36■□□□□ 0.37
KLHDC4-216ENST00000566561 CD163L1Q9NR16 1453 aa17.36■□□□□ 0.37
KLHDC4-216ENST00000566561 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
KLHDC4-216ENST00000566561 WNK3Q9BYP7 1800 aa17.35■□□□□ 0.37
KLHDC4-216ENST00000566561 YY1P25490 414 aa17.35■□□□□ 0.37
KLHDC4-216ENST00000566561 TMF1P82094 1093 aa17.35■□□□□ 0.37
KLHDC4-216ENST00000566561 TOM1L2Q6ZVM7 507 aa17.35■□□□□ 0.37
KLHDC4-216ENST00000566561 CCER1Q8TC90 406 aaPredicted RBP17.35■□□□□ 0.37
KLHDC4-216ENST00000566561 PPP1R1BQ9UD71 204 aaPredicted RBP17.35■□□□□ 0.37
KLHDC4-216ENST00000566561 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
KLHDC4-216ENST00000566561 A0A1W2PP64 1363 aa17.34■□□□□ 0.37
KLHDC4-216ENST00000566561 LRRC37A3O60309 1634 aa17.34■□□□□ 0.37
KLHDC4-216ENST00000566561 CRB1P82279 1406 aa17.34■□□□□ 0.37
KLHDC4-216ENST00000566561 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
KLHDC4-216ENST00000566561 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
KLHDC4-216ENST00000566561 NINLQ9Y2I6 1382 aa17.33■□□□□ 0.36
KLHDC4-216ENST00000566561 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.36
KLHDC4-216ENST00000566561 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
KLHDC4-216ENST00000566561 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.36
KLHDC4-216ENST00000566561 PEAK1Q9H792 1746 aa17.33■□□□□ 0.36
KLHDC4-216ENST00000566561 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
KLHDC4-216ENST00000566561 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
KLHDC4-216ENST00000566561 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
KLHDC4-216ENST00000566561 SPON1Q9HCB6 807 aa17.32■□□□□ 0.36
KLHDC4-216ENST00000566561 MON2Q7Z3U7 1717 aa17.32■□□□□ 0.36
KLHDC4-216ENST00000566561 WDR17Q8IZU2 1322 aa17.31■□□□□ 0.36
KLHDC4-216ENST00000566561 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
KLHDC4-216ENST00000566561 CASZ1Q86V15 1759 aa17.3■□□□□ 0.36
KLHDC4-216ENST00000566561 NFAT5O94916 1531 aa17.29■□□□□ 0.36
KLHDC4-216ENST00000566561 KCNQ2O43526 872 aa17.28■□□□□ 0.36
KLHDC4-216ENST00000566561 DDB1Q16531 1140 aa17.27■□□□□ 0.36
KLHDC4-216ENST00000566561 COG3Q96JB2 828 aa17.27■□□□□ 0.36
KLHDC4-216ENST00000566561 CARD10Q9BWT7 1032 aa17.27■□□□□ 0.36
KLHDC4-216ENST00000566561 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
KLHDC4-216ENST00000566561 COL18A1P39060 1754 aa17.25■□□□□ 0.35
KLHDC4-216ENST00000566561 CDCA7Q9BWT1 371 aaPredicted RBP17.25■□□□□ 0.35
KLHDC4-216ENST00000566561 CHD4Q14839 1912 aa17.23■□□□□ 0.35
KLHDC4-216ENST00000566561 MYOM1P52179 1685 aa17.23■□□□□ 0.35
KLHDC4-216ENST00000566561 NLRP2Q9NX02 1062 aa17.23■□□□□ 0.35
KLHDC4-216ENST00000566561 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
KLHDC4-216ENST00000566561 ABCC6O95255 1503 aa17.22■□□□□ 0.35
KLHDC4-216ENST00000566561 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
KLHDC4-216ENST00000566561 CCDC7Q96M83 1385 aa17.22■□□□□ 0.35
KLHDC4-216ENST00000566561 ERBB3P21860 1342 aa17.21■□□□□ 0.35
KLHDC4-216ENST00000566561 USP54Q70EL1 1684 aa17.21■□□□□ 0.35
KLHDC4-216ENST00000566561 PLSCR1O15162 318 aa17.21■□□□□ 0.35
KLHDC4-216ENST00000566561 GGNBP2Q9H3C7 697 aa17.21■□□□□ 0.35
KLHDC4-216ENST00000566561 EXOC5O00471 708 aa17.2■□□□□ 0.34
KLHDC4-216ENST00000566561 IP6K1Q92551 441 aa17.2■□□□□ 0.34
KLHDC4-216ENST00000566561 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
KLHDC4-216ENST00000566561 FYB1O15117 783 aa17.19■□□□□ 0.34
KLHDC4-216ENST00000566561 AMPHP49418 695 aa17.19■□□□□ 0.34
KLHDC4-216ENST00000566561 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
KLHDC4-216ENST00000566561 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
KLHDC4-216ENST00000566561 FBLN1P23142 703 aa17.18■□□□□ 0.34
KLHDC4-216ENST00000566561 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
KLHDC4-216ENST00000566561 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
KLHDC4-216ENST00000566561 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
KLHDC4-216ENST00000566561 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
KLHDC4-216ENST00000566561 BCL9O00512 1426 aa17.17■□□□□ 0.34
KLHDC4-216ENST00000566561 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
KLHDC4-216ENST00000566561 IL2RBP14784 551 aa17.16■□□□□ 0.34
KLHDC4-216ENST00000566561 HOXC9P31274 260 aa17.16■□□□□ 0.34
KLHDC4-216ENST00000566561 KAT6BQ8WYB5 2073 aa17.16■□□□□ 0.34
KLHDC4-216ENST00000566561 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
KLHDC4-216ENST00000566561 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
KLHDC4-216ENST00000566561 NHSQ6T4R5 1651 aa17.15■□□□□ 0.34
KLHDC4-216ENST00000566561 LTN1O94822 1766 aa17.14■□□□□ 0.33
KLHDC4-216ENST00000566561 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
KLHDC4-216ENST00000566561 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
KLHDC4-216ENST00000566561 STK32BQ9NY57 414 aa17.13■□□□□ 0.33
KLHDC4-216ENST00000566561 TNS2Q63HR2 1409 aa17.13■□□□□ 0.33
KLHDC4-216ENST00000566561 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
KLHDC4-216ENST00000566561 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
KLHDC4-216ENST00000566561 UTRNP46939 3433 aa17.1■□□□□ 0.33
KLHDC4-216ENST00000566561 BTAF1O14981 1849 aa17.1■□□□□ 0.33
KLHDC4-216ENST00000566561 PTGER2P43116 358 aa17.09■□□□□ 0.33
KLHDC4-216ENST00000566561 TXNRD1Q16881 649 aa17.09■□□□□ 0.33
KLHDC4-216ENST00000566561 PDGFDQ9GZP0 370 aaPredicted RBP17.09■□□□□ 0.33
KLHDC4-216ENST00000566561 CGNL1Q0VF96 1302 aa17.09■□□□□ 0.33
KLHDC4-216ENST00000566561 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
KLHDC4-216ENST00000566561 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
KLHDC4-216ENST00000566561 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.32
KLHDC4-216ENST00000566561 SMG6Q86US8 1419 aaKnown RBP17.07■□□□□ 0.32
KLHDC4-216ENST00000566561 SLC15A2Q16348 729 aa17.07■□□□□ 0.32
KLHDC4-216ENST00000566561 PROM2Q8N271 834 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms