RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 HOXC9P31274 260 aa17.27■□□□□ 0.36
CDH11-205ENST00000562882 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
CDH11-205ENST00000562882 USP21Q9UK80 565 aa17.27■□□□□ 0.36
CDH11-205ENST00000562882 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
CDH11-205ENST00000562882 ATRNO75882 1429 aa17.27■□□□□ 0.35
CDH11-205ENST00000562882 LTN1O94822 1766 aa17.27■□□□□ 0.35
CDH11-205ENST00000562882 COL18A1P39060 1754 aa17.27■□□□□ 0.35
CDH11-205ENST00000562882 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.27■□□□□ 0.35
CDH11-205ENST00000562882 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
CDH11-205ENST00000562882 ZNF772Q68DY9 489 aaPredicted RBP17.26■□□□□ 0.35
CDH11-205ENST00000562882 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
CDH11-205ENST00000562882 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
CDH11-205ENST00000562882 NWD2Q9ULI1 1742 aa17.25■□□□□ 0.35
CDH11-205ENST00000562882 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
CDH11-205ENST00000562882 MTHFSP49914 203 aa17.25■□□□□ 0.35
CDH11-205ENST00000562882 EVA1CP58658 441 aa17.25■□□□□ 0.35
CDH11-205ENST00000562882 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
CDH11-205ENST00000562882 FLT4P35916 1363 aa17.25■□□□□ 0.35
CDH11-205ENST00000562882 NRAPQ86VF7 1730 aa17.24■□□□□ 0.35
CDH11-205ENST00000562882 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
CDH11-205ENST00000562882 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
CDH11-205ENST00000562882 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
CDH11-205ENST00000562882 PLCH1Q4KWH8 1693 aa17.23■□□□□ 0.35
CDH11-205ENST00000562882 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
CDH11-205ENST00000562882 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
CDH11-205ENST00000562882 INSRP06213 1382 aa17.23■□□□□ 0.35
CDH11-205ENST00000562882 VPS72Q15906 364 aa17.22■□□□□ 0.35
CDH11-205ENST00000562882 QTRT2Q9H974 415 aaKnown RBP17.22■□□□□ 0.35
CDH11-205ENST00000562882 TRPC5Q9UL62 973 aaPredicted RBP17.22■□□□□ 0.35
CDH11-205ENST00000562882 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
CDH11-205ENST00000562882 CDK12Q9NYV4 1490 aaPredicted RBP17.21■□□□□ 0.35
CDH11-205ENST00000562882 ANP32CO43423 234 aa17.21■□□□□ 0.35
CDH11-205ENST00000562882 ANKRD24Q8TF21 1146 aa17.21■□□□□ 0.35
CDH11-205ENST00000562882 STRN4Q9NRL3 753 aa17.21■□□□□ 0.35
CDH11-205ENST00000562882 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
CDH11-205ENST00000562882 ERBB3P21860 1342 aa17.21■□□□□ 0.34
CDH11-205ENST00000562882 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.34
CDH11-205ENST00000562882 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
CDH11-205ENST00000562882 LARP1Q6PKG0 1096 aaKnown RBP17.2■□□□□ 0.34
CDH11-205ENST00000562882 MYBBP1AQ9BQG0 1328 aaKnown RBP17.2■□□□□ 0.34
CDH11-205ENST00000562882 GLI3P10071 1580 aa17.19■□□□□ 0.34
CDH11-205ENST00000562882 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
CDH11-205ENST00000562882 CRB1P82279 1406 aa17.17■□□□□ 0.34
CDH11-205ENST00000562882 TOM1L2Q6ZVM7 507 aa17.17■□□□□ 0.34
CDH11-205ENST00000562882 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
CDH11-205ENST00000562882 GJD4Q96KN9 370 aaPredicted RBP17.17■□□□□ 0.34
CDH11-205ENST00000562882 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
CDH11-205ENST00000562882 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
CDH11-205ENST00000562882 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
CDH11-205ENST00000562882 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
CDH11-205ENST00000562882 RBM6P78332 1123 aaKnown RBP17.16■□□□□ 0.34
CDH11-205ENST00000562882 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
CDH11-205ENST00000562882 DIEXFQ68CQ4 756 aaKnown RBP17.16■□□□□ 0.34
CDH11-205ENST00000562882 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
CDH11-205ENST00000562882 SPATA31A1Q5TZJ5 1347 aa17.16■□□□□ 0.34
CDH11-205ENST00000562882 ONECUT3O60422 494 aaPredicted RBP17.15■□□□□ 0.34
CDH11-205ENST00000562882 IL13P35225 146 aa17.15■□□□□ 0.34
CDH11-205ENST00000562882 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
CDH11-205ENST00000562882 THRAP3Q9Y2W1 955 aaKnown RBP17.15■□□□□ 0.34
CDH11-205ENST00000562882 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
CDH11-205ENST00000562882 RGS12O14924 1447 aa17.13■□□□□ 0.33
CDH11-205ENST00000562882 RXRBP28702 533 aa17.13■□□□□ 0.33
CDH11-205ENST00000562882 NBPF6Q5VWK0 638 aa17.13■□□□□ 0.33
CDH11-205ENST00000562882 TCP11L2Q8N4U5 519 aa17.13■□□□□ 0.33
CDH11-205ENST00000562882 NBPF4Q96M43 638 aa17.13■□□□□ 0.33
CDH11-205ENST00000562882 BARGINQ6ZT62 677 aa17.12■□□□□ 0.33
CDH11-205ENST00000562882 EYA1Q99502 592 aa17.12■□□□□ 0.33
CDH11-205ENST00000562882 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
CDH11-205ENST00000562882 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
CDH11-205ENST00000562882 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
CDH11-205ENST00000562882 COL3A1P02461 1466 aaPredicted RBP17.1■□□□□ 0.33
CDH11-205ENST00000562882 CDCA7Q9BWT1 371 aaPredicted RBP17.09■□□□□ 0.33
CDH11-205ENST00000562882 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
CDH11-205ENST00000562882 EP400Q96L91 3159 aa17.09■□□□□ 0.33
CDH11-205ENST00000562882 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
CDH11-205ENST00000562882 THSD7AQ9UPZ6 1657 aa17.07■□□□□ 0.32
CDH11-205ENST00000562882 NCAPD2Q15021 1401 aa17.07■□□□□ 0.32
CDH11-205ENST00000562882 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
CDH11-205ENST00000562882 IL2RBP14784 551 aa17.06■□□□□ 0.32
CDH11-205ENST00000562882 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
CDH11-205ENST00000562882 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
CDH11-205ENST00000562882 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
CDH11-205ENST00000562882 RGPD1P0DJD0 1748 aa17.04■□□□□ 0.32
CDH11-205ENST00000562882 KDRP35968 1356 aa17.04■□□□□ 0.32
CDH11-205ENST00000562882 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
CDH11-205ENST00000562882 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
CDH11-205ENST00000562882 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
CDH11-205ENST00000562882 EXOC5O00471 708 aa17.02■□□□□ 0.32
CDH11-205ENST00000562882 SOCS7O14512 581 aa17.02■□□□□ 0.32
CDH11-205ENST00000562882 FCHSD2O94868 740 aa17.02■□□□□ 0.32
CDH11-205ENST00000562882 U2AF1L5P0DN76 240 aaPredicted RBP17.02■□□□□ 0.32
CDH11-205ENST00000562882 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
CDH11-205ENST00000562882 U2AF1Q01081 240 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDH11-205ENST00000562882 CCDC184Q52MB2 194 aa17.02■□□□□ 0.32
CDH11-205ENST00000562882 HMOX1P09601 288 aa17.01■□□□□ 0.31
CDH11-205ENST00000562882 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
CDH11-205ENST00000562882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDH11-205ENST00000562882 PLEKHG2Q9H7P9 1386 aa17.01■□□□□ 0.31
CDH11-205ENST00000562882 A0A0G2JS52 829 aa17■□□□□ 0.31
CDH11-205ENST00000562882 CCER2I3L3R5 266 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms